RNA–Protein interactions for RNA: ENST00000519369.1

RPS20-203, Transcript of ribosomal protein S20, humanhuman

TSL 2

Gene RPS20, Length 824 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS20-203ENST00000519369 NISCHQ9Y2I1 1504 aa32.58■■■□□ 2.81
RPS20-203ENST00000519369 CCDC180Q9P1Z9 1646 aa29.03■■■□□ 2.24
RPS20-203ENST00000519369 ABCC9O60706 1549 aa28.53■■■□□ 2.16
RPS20-203ENST00000519369 RB1CC1Q8TDY2 1594 aa27.47■■□□□ 1.99
RPS20-203ENST00000519369 NACADO15069 1562 aa27.41■■□□□ 1.98
RPS20-203ENST00000519369 DCAF8L2P0C7V8 631 aa27.35■■□□□ 1.97
RPS20-203ENST00000519369 MYO15BQ96JP2 1530 aa27.25■■□□□ 1.95
RPS20-203ENST00000519369 ZCCHC6Q5VYS8 1495 aaKnown RBP27.08■■□□□ 1.93
RPS20-203ENST00000519369 DCAF1Q9Y4B6 1507 aa27.03■■□□□ 1.92
RPS20-203ENST00000519369 PABPN1Q86U42 306 aaKnown RBP eCLIP26.65■■□□□ 1.86
RPS20-203ENST00000519369 UNC13AQ9UPW8 1703 aa26.59■■□□□ 1.85
RPS20-203ENST00000519369 BICRAQ9NZM4 1560 aa26.49■■□□□ 1.83
RPS20-203ENST00000519369 SHROOM4Q9ULL8 1493 aa26.46■■□□□ 1.83
RPS20-203ENST00000519369 SCRIBQ14160 1630 aa26.38■■□□□ 1.81
RPS20-203ENST00000519369 DNAJC5BQ9UF47 199 aa26.31■■□□□ 1.8
RPS20-203ENST00000519369 EIF4G1Q04637 1599 aaKnown RBP25.88■■□□□ 1.73
RPS20-203ENST00000519369 CC2D2AQ9P2K1 1620 aa25.79■■□□□ 1.72
RPS20-203ENST00000519369 CECR2Q9BXF3 1484 aa25.72■■□□□ 1.71
RPS20-203ENST00000519369 BAZ1AQ9NRL2 1556 aaPredicted RBP25.31■■□□□ 1.64
RPS20-203ENST00000519369 NCAPD3P42695 1498 aa25.3■■□□□ 1.64
RPS20-203ENST00000519369 SMARCA4P51532 1647 aa25.26■■□□□ 1.63
RPS20-203ENST00000519369 SMARCA2P51531 1590 aa25.25■■□□□ 1.63
RPS20-203ENST00000519369 ATAD2BQ9ULI0 1458 aa25.24■■□□□ 1.63
RPS20-203ENST00000519369 HMGXB3Q12766 1538 aa25.12■■□□□ 1.61
RPS20-203ENST00000519369 PEG3Q9GZU2 1588 aa25.08■■□□□ 1.61
RPS20-203ENST00000519369 BAZ1BQ9UIG0 1483 aaKnown RBP25.04■■□□□ 1.6
RPS20-203ENST00000519369 MROH2BQ7Z745 1585 aa25.03■■□□□ 1.6
RPS20-203ENST00000519369 RSF1Q96T23 1441 aaPredicted RBP24.75■■□□□ 1.55
RPS20-203ENST00000519369 ERCC6Q03468 1493 aa24.71■■□□□ 1.55
RPS20-203ENST00000519369 WIZO95785 1651 aa24.7■■□□□ 1.54
RPS20-203ENST00000519369 LAMC3Q9Y6N6 1575 aa24.63■■□□□ 1.53
RPS20-203ENST00000519369 NESP48681 1621 aa24.58■■□□□ 1.53
RPS20-203ENST00000519369 CADPSQ9ULU8 1353 aa24.57■■□□□ 1.52
RPS20-203ENST00000519369 PDS5BQ9NTI5 1447 aa24.57■■□□□ 1.52
RPS20-203ENST00000519369 CUX2O14529 1486 aa24.55■■□□□ 1.52
RPS20-203ENST00000519369 TOP2AP11388 1531 aaKnown RBP24.54■■□□□ 1.52
RPS20-203ENST00000519369 CFTRP13569 1480 aa24.35■■□□□ 1.49
RPS20-203ENST00000519369 THOC2Q8NI27 1593 aaKnown RBP24.26■■□□□ 1.47
RPS20-203ENST00000519369 CCDC88BA6NC98 1476 aa24.25■■□□□ 1.47
RPS20-203ENST00000519369 KIF21AQ7Z4S6 1674 aa24.24■■□□□ 1.47
RPS20-203ENST00000519369 CEP164Q9UPV0 1460 aa24.24■■□□□ 1.47
RPS20-203ENST00000519369 FANCD2Q9BXW9 1451 aa24.23■■□□□ 1.47
RPS20-203ENST00000519369 MRC2Q9UBG0 1479 aa24.23■■□□□ 1.47
RPS20-203ENST00000519369 WDR62O43379 1518 aa24.12■■□□□ 1.45
RPS20-203ENST00000519369 PRDM2Q13029 1718 aa24.01■■□□□ 1.43
RPS20-203ENST00000519369 SUPT5HO00267 1087 aaKnown RBP24■■□□□ 1.43
RPS20-203ENST00000519369 DNAJC5Q9H3Z4 198 aa24■■□□□ 1.43
RPS20-203ENST00000519369 ABCC8Q09428 1581 aa23.95■■□□□ 1.42
RPS20-203ENST00000519369 URB2Q14146 1524 aaKnown RBP23.93■■□□□ 1.42
RPS20-203ENST00000519369 TOPBP1Q92547 1522 aa23.79■■□□□ 1.4
RPS20-203ENST00000519369 IFT140Q96RY7 1462 aa23.77■■□□□ 1.4
RPS20-203ENST00000519369 DNMBPQ6XZF7 1577 aa23.76■■□□□ 1.39
RPS20-203ENST00000519369 POLA1P09884 1462 aaPredicted RBP23.58■■□□□ 1.37
RPS20-203ENST00000519369 OSCARQ8IYS5 282 aa23.55■■□□□ 1.36
RPS20-203ENST00000519369 SOGA1O94964 1423 aa23.55■■□□□ 1.36
RPS20-203ENST00000519369 ZNF608Q9ULD9 1512 aaPredicted RBP23.54■■□□□ 1.36
RPS20-203ENST00000519369 CUX1P39880 1505 aa23.5■■□□□ 1.35
RPS20-203ENST00000519369 TARBP1Q13395 1621 aaKnown RBP23.49■■□□□ 1.35
RPS20-203ENST00000519369 FGD5Q6ZNL6 1462 aa23.49■■□□□ 1.35
RPS20-203ENST00000519369 WDR97A6NE52 1622 aa23.46■■□□□ 1.35
RPS20-203ENST00000519369 AQRO60306 1485 aaKnown RBP eCLIP23.43■■□□□ 1.342e-9■■■■□ 23.9
RPS20-203ENST00000519369 RAD54L2Q9Y4B4 1467 aa23.43■■□□□ 1.34
RPS20-203ENST00000519369 EIF4G3O43432 1585 aaKnown RBP23.43■■□□□ 1.34
RPS20-203ENST00000519369 WRNQ14191 1432 aaPredicted RBP eCLIP23.39■■□□□ 1.33
RPS20-203ENST00000519369 TDRD9Q8NDG6 1382 aaKnown RBP23.39■■□□□ 1.33
RPS20-203ENST00000519369 ABCA10Q8WWZ4 1543 aa23.31■■□□□ 1.32
RPS20-203ENST00000519369 GRIN2BQ13224 1484 aa23.3■■□□□ 1.32
RPS20-203ENST00000519369 TOP2BQ02880 1626 aa23.3■■□□□ 1.32
RPS20-203ENST00000519369 FBLN2P98095 1184 aa23.27■■□□□ 1.32
RPS20-203ENST00000519369 MAGI1Q96QZ7 1491 aaPredicted RBP23.27■■□□□ 1.32
RPS20-203ENST00000519369 BIVM-ERCC5R4GMW8 1640 aa23.26■■□□□ 1.31
RPS20-203ENST00000519369 GAPVD1Q14C86 1478 aa23.25■■□□□ 1.31
RPS20-203ENST00000519369 CHMP7Q8WUX9 453 aaPredicted RBP23.24■■□□□ 1.31
RPS20-203ENST00000519369 SNAPC4Q5SXM2 1469 aa23.21■■□□□ 1.31
RPS20-203ENST00000519369 SYNJ1O43426 1573 aa23.19■■□□□ 1.3
RPS20-203ENST00000519369 SYNJ2O15056 1496 aa23.16■■□□□ 1.3
RPS20-203ENST00000519369 ABCA5Q8WWZ7 1642 aa23.14■■□□□ 1.29
RPS20-203ENST00000519369 CHD1O14646 1710 aa23.11■■□□□ 1.29
RPS20-203ENST00000519369 PBRM1Q86U86 1689 aa23.07■■□□□ 1.28
RPS20-203ENST00000519369 TRIM41Q8WV44 630 aa23.07■■□□□ 1.28
RPS20-203ENST00000519369 ERICH3Q5RHP9 1530 aa23.04■■□□□ 1.28
RPS20-203ENST00000519369 FHAD1B1AJZ9 1412 aa23.02■■□□□ 1.28
RPS20-203ENST00000519369 ARHGEF11O15085 1522 aa23.02■■□□□ 1.28
RPS20-203ENST00000519369 RIMBP3CA6NJZ7 1639 aa22.98■■□□□ 1.27
RPS20-203ENST00000519369 RIMBP3BA6NNM3 1639 aa22.98■■□□□ 1.27
RPS20-203ENST00000519369 RIMBP3Q9UFD9 1639 aa22.98■■□□□ 1.27
RPS20-203ENST00000519369 KIF27Q86VH2 1401 aa22.97■■□□□ 1.27
RPS20-203ENST00000519369 GRIN2AQ12879 1464 aa22.95■■□□□ 1.26
RPS20-203ENST00000519369 CLASP1Q7Z460 1538 aa22.95■■□□□ 1.26
RPS20-203ENST00000519369 ADAMTS12P58397 1594 aa22.93■■□□□ 1.26
RPS20-203ENST00000519369 CYB5RLQ6IPT4 315 aa22.88■■□□□ 1.25
RPS20-203ENST00000519369 NUP160Q12769 1436 aa22.88■■□□□ 1.25
RPS20-203ENST00000519369 IGF1RP08069 1367 aa22.85■■□□□ 1.25
RPS20-203ENST00000519369 ARAP1Q96P48 1450 aa22.79■■□□□ 1.24
RPS20-203ENST00000519369 CUL7Q14999 1698 aa22.76■■□□□ 1.23
RPS20-203ENST00000519369 CEP170Q5SW79 1584 aa22.76■■□□□ 1.23
RPS20-203ENST00000519369 CARMIL1Q5VZK9 1371 aa22.74■■□□□ 1.23
RPS20-203ENST00000519369 JPH4Q96JJ6 628 aa22.71■■□□□ 1.23
RPS20-203ENST00000519369 KIAA0586Q9BVV6 1533 aa22.66■■□□□ 1.22
RPS20-203ENST00000519369 SHROOM2Q13796 1616 aa22.65■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms