RNA–Protein interactions for RNA: ENST00000519291.5

DENND3-210, Transcript of DENN domain containing 3, humanhuman

TSL 4

Gene DENND3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND3-210ENST00000519291 NISCHQ9Y2I1 1504 aa38.63■■■■□ 3.77
DENND3-210ENST00000519291 CCDC180Q9P1Z9 1646 aa34.67■■■■□ 3.14
DENND3-210ENST00000519291 ABCC9O60706 1549 aa34.33■■■■□ 3.09
DENND3-210ENST00000519291 RB1CC1Q8TDY2 1594 aa32.84■■■□□ 2.85
DENND3-210ENST00000519291 NACADO15069 1562 aa32.66■■■□□ 2.82
DENND3-210ENST00000519291 DCAF8L2P0C7V8 631 aa32.37■■■□□ 2.77
DENND3-210ENST00000519291 MYO15BQ96JP2 1530 aa32.29■■■□□ 2.76
DENND3-210ENST00000519291 UNC13AQ9UPW8 1703 aa32.21■■■□□ 2.75
DENND3-210ENST00000519291 ZCCHC6Q5VYS8 1495 aaKnown RBP32.09■■■□□ 2.73
DENND3-210ENST00000519291 DNAJC5BQ9UF47 199 aa31.95■■■□□ 2.71
DENND3-210ENST00000519291 DCAF1Q9Y4B6 1507 aa31.95■■■□□ 2.7
DENND3-210ENST00000519291 PABPN1Q86U42 306 aaKnown RBP eCLIP31.92■■■□□ 2.7
DENND3-210ENST00000519291 BICRAQ9NZM4 1560 aa31.87■■■□□ 2.69
DENND3-210ENST00000519291 SCRIBQ14160 1630 aa31.54■■■□□ 2.64
DENND3-210ENST00000519291 SHROOM4Q9ULL8 1493 aa31.49■■■□□ 2.63
DENND3-210ENST00000519291 CC2D2AQ9P2K1 1620 aa31.09■■■□□ 2.57
DENND3-210ENST00000519291 EIF4G1Q04637 1599 aaKnown RBP31.07■■■□□ 2.56
DENND3-210ENST00000519291 CECR2Q9BXF3 1484 aa30.91■■■□□ 2.54
DENND3-210ENST00000519291 SMARCA4P51532 1647 aa30.13■■■□□ 2.41
DENND3-210ENST00000519291 NCAPD3P42695 1498 aa30.1■■■□□ 2.41
DENND3-210ENST00000519291 ATAD2BQ9ULI0 1458 aa30.05■■■□□ 2.4
DENND3-210ENST00000519291 SMARCA2P51531 1590 aa30.02■■■□□ 2.4
DENND3-210ENST00000519291 BAZ1AQ9NRL2 1556 aaPredicted RBP29.99■■■□□ 2.39
DENND3-210ENST00000519291 HMGXB3Q12766 1538 aa29.96■■■□□ 2.39
DENND3-210ENST00000519291 PEG3Q9GZU2 1588 aa29.85■■■□□ 2.37
DENND3-210ENST00000519291 BAZ1BQ9UIG0 1483 aaKnown RBP29.78■■■□□ 2.36
DENND3-210ENST00000519291 MROH2BQ7Z745 1585 aa29.76■■■□□ 2.35
DENND3-210ENST00000519291 ERCC6Q03468 1493 aa29.63■■■□□ 2.33
DENND3-210ENST00000519291 NESP48681 1621 aa29.56■■■□□ 2.32
DENND3-210ENST00000519291 CUX2O14529 1486 aa29.55■■■□□ 2.32
DENND3-210ENST00000519291 WIZO95785 1651 aa29.46■■■□□ 2.31
DENND3-210ENST00000519291 LAMC3Q9Y6N6 1575 aa29.45■■■□□ 2.31
DENND3-210ENST00000519291 THOC2Q8NI27 1593 aaKnown RBP29.31■■■□□ 2.28
DENND3-210ENST00000519291 KIF21AQ7Z4S6 1674 aa29.3■■■□□ 2.28
DENND3-210ENST00000519291 PDS5BQ9NTI5 1447 aa29.2■■■□□ 2.27
DENND3-210ENST00000519291 DNAJC5Q9H3Z4 198 aa29.2■■■□□ 2.26
DENND3-210ENST00000519291 RSF1Q96T23 1441 aaPredicted RBP29.18■■■□□ 2.26
DENND3-210ENST00000519291 CADPSQ9ULU8 1353 aa29.17■■■□□ 2.26
DENND3-210ENST00000519291 TOP2AP11388 1531 aaKnown RBP29.09■■■□□ 2.25
DENND3-210ENST00000519291 MRC2Q9UBG0 1479 aa28.97■■■□□ 2.23
DENND3-210ENST00000519291 WDR62O43379 1518 aa28.93■■■□□ 2.22
DENND3-210ENST00000519291 CFTRP13569 1480 aa28.92■■■□□ 2.22
DENND3-210ENST00000519291 CEP164Q9UPV0 1460 aa28.91■■■□□ 2.22
DENND3-210ENST00000519291 FANCD2Q9BXW9 1451 aa28.87■■■□□ 2.21
DENND3-210ENST00000519291 PRDM2Q13029 1718 aa28.83■■■□□ 2.21
DENND3-210ENST00000519291 CCDC88BA6NC98 1476 aa28.7■■■□□ 2.18
DENND3-210ENST00000519291 URB2Q14146 1524 aaKnown RBP28.63■■■□□ 2.17
DENND3-210ENST00000519291 TOPBP1Q92547 1522 aa28.37■■■□□ 2.13
DENND3-210ENST00000519291 ABCC8Q09428 1581 aa28.32■■■□□ 2.12
DENND3-210ENST00000519291 DNMBPQ6XZF7 1577 aa28.31■■■□□ 2.12
DENND3-210ENST00000519291 IFT140Q96RY7 1462 aa28.3■■■□□ 2.12
DENND3-210ENST00000519291 ZNF608Q9ULD9 1512 aaPredicted RBP28.23■■■□□ 2.11
DENND3-210ENST00000519291 EIF4G3O43432 1585 aaKnown RBP28.16■■■□□ 2.1
DENND3-210ENST00000519291 OSCARQ8IYS5 282 aa28.14■■■□□ 2.1
DENND3-210ENST00000519291 TARBP1Q13395 1621 aaKnown RBP28.14■■■□□ 2.09
DENND3-210ENST00000519291 POLA1P09884 1462 aaPredicted RBP28.08■■■□□ 2.09
DENND3-210ENST00000519291 TRIM41Q8WV44 630 aa27.99■■■□□ 2.07
DENND3-210ENST00000519291 SUPT5HO00267 1087 aaKnown RBP27.98■■■□□ 2.07
DENND3-210ENST00000519291 AQRO60306 1485 aaKnown RBP eCLIP27.97■■■□□ 2.07
DENND3-210ENST00000519291 CUX1P39880 1505 aa27.96■■■□□ 2.07
DENND3-210ENST00000519291 CHD1O14646 1710 aa27.95■■■□□ 2.06
DENND3-210ENST00000519291 RAD54L2Q9Y4B4 1467 aa27.95■■■□□ 2.06
DENND3-210ENST00000519291 FGD5Q6ZNL6 1462 aa27.94■■■□□ 2.06
DENND3-210ENST00000519291 SOGA1O94964 1423 aa27.92■■■□□ 2.06
DENND3-210ENST00000519291 WDR97A6NE52 1622 aa27.9■■■□□ 2.06
DENND3-210ENST00000519291 RIMBP3CA6NJZ7 1639 aa27.88■■■□□ 2.05
DENND3-210ENST00000519291 RIMBP3BA6NNM3 1639 aa27.88■■■□□ 2.05
DENND3-210ENST00000519291 RIMBP3Q9UFD9 1639 aa27.88■■■□□ 2.05
DENND3-210ENST00000519291 TDRD9Q8NDG6 1382 aaKnown RBP27.81■■■□□ 2.04
DENND3-210ENST00000519291 ARHGEF11O15085 1522 aa27.77■■■□□ 2.04
DENND3-210ENST00000519291 SNAPC4Q5SXM2 1469 aa27.74■■■□□ 2.03
DENND3-210ENST00000519291 PBRM1Q86U86 1689 aa27.71■■■□□ 2.03
DENND3-210ENST00000519291 FBLN2P98095 1184 aa27.7■■■□□ 2.02
DENND3-210ENST00000519291 MAGI1Q96QZ7 1491 aaPredicted RBP27.69■■■□□ 2.02
DENND3-210ENST00000519291 GRIN2BQ13224 1484 aa27.68■■■□□ 2.02
DENND3-210ENST00000519291 ABCA10Q8WWZ4 1543 aa27.65■■■□□ 2.02
DENND3-210ENST00000519291 ABCA5Q8WWZ7 1642 aa27.63■■■□□ 2.01
DENND3-210ENST00000519291 BIVM-ERCC5R4GMW8 1640 aa27.63■■■□□ 2.01
DENND3-210ENST00000519291 GAPVD1Q14C86 1478 aa27.61■■■□□ 2.01
DENND3-210ENST00000519291 TOP2BQ02880 1626 aa27.59■■■□□ 2.01
DENND3-210ENST00000519291 SYNJ1O43426 1573 aa27.58■■■□□ 2.01
DENND3-210ENST00000519291 SYNJ2O15056 1496 aa27.57■■■□□ 2
DENND3-210ENST00000519291 CLASP1Q7Z460 1538 aa27.57■■■□□ 2
DENND3-210ENST00000519291 WRNQ14191 1432 aaPredicted RBP eCLIP27.54■■■□□ 2
DENND3-210ENST00000519291 CHMP7Q8WUX9 453 aaPredicted RBP27.54■■■□□ 2
DENND3-210ENST00000519291 ARAP1Q96P48 1450 aa27.51■■■□□ 2
DENND3-210ENST00000519291 CYB5RLQ6IPT4 315 aa27.45■■□□□ 1.98
DENND3-210ENST00000519291 ADAMTS12P58397 1594 aa27.4■■□□□ 1.98
DENND3-210ENST00000519291 GRIN2AQ12879 1464 aa27.34■■□□□ 1.97
DENND3-210ENST00000519291 ERICH3Q5RHP9 1530 aa27.32■■□□□ 1.96
DENND3-210ENST00000519291 CEP170Q5SW79 1584 aa27.26■■□□□ 1.96
DENND3-210ENST00000519291 FHAD1B1AJZ9 1412 aa27.26■■□□□ 1.95
DENND3-210ENST00000519291 NUP160Q12769 1436 aa27.24■■□□□ 1.95
DENND3-210ENST00000519291 SHROOM2Q13796 1616 aa27.16■■□□□ 1.94
DENND3-210ENST00000519291 ERCC6L2Q5T890 1561 aa27.14■■□□□ 1.93
DENND3-210ENST00000519291 TRHP20396 242 aaPredicted RBP27.08■■□□□ 1.93
DENND3-210ENST00000519291 RUSC2Q8N2Y8 1516 aa27.02■■□□□ 1.92
DENND3-210ENST00000519291 CUL7Q14999 1698 aa27.01■■□□□ 1.91
DENND3-210ENST00000519291 KIF27Q86VH2 1401 aa26.99■■□□□ 1.91
DENND3-210ENST00000519291 IGF1RP08069 1367 aa26.93■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms