RNA–Protein interactions for RNA: ENST00000519221.5

MCPH1-202, Transcript of microcephalin 1, humanhuman

TSL 3

Gene MCPH1, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCPH1-202ENST00000519221 NISCHQ9Y2I1 1504 aa31.39■■■□□ 2.61
MCPH1-202ENST00000519221 CCDC180Q9P1Z9 1646 aa28.09■■■□□ 2.09
MCPH1-202ENST00000519221 ABCC9O60706 1549 aa27.6■■■□□ 2.01
MCPH1-202ENST00000519221 RB1CC1Q8TDY2 1594 aa26.53■■□□□ 1.84
MCPH1-202ENST00000519221 NACADO15069 1562 aa26.45■■□□□ 1.82
MCPH1-202ENST00000519221 MYO15BQ96JP2 1530 aa26.24■■□□□ 1.79
MCPH1-202ENST00000519221 DCAF8L2P0C7V8 631 aa26.22■■□□□ 1.79
MCPH1-202ENST00000519221 ZCCHC6Q5VYS8 1495 aaKnown RBP26.09■■□□□ 1.77
MCPH1-202ENST00000519221 DCAF1Q9Y4B6 1507 aa26.02■■□□□ 1.76
MCPH1-202ENST00000519221 UNC13AQ9UPW8 1703 aa25.94■■□□□ 1.74
MCPH1-202ENST00000519221 PABPN1Q86U42 306 aaKnown RBP eCLIP25.71■■□□□ 1.71
MCPH1-202ENST00000519221 BICRAQ9NZM4 1560 aa25.69■■□□□ 1.7
MCPH1-202ENST00000519221 DNAJC5BQ9UF47 199 aa25.52■■□□□ 1.68
MCPH1-202ENST00000519221 SCRIBQ14160 1630 aa25.5■■□□□ 1.67
MCPH1-202ENST00000519221 SHROOM4Q9ULL8 1493 aa25.5■■□□□ 1.67
MCPH1-202ENST00000519221 EIF4G1Q04637 1599 aaKnown RBP25.05■■□□□ 1.6
MCPH1-202ENST00000519221 CC2D2AQ9P2K1 1620 aa25■■□□□ 1.59
MCPH1-202ENST00000519221 CECR2Q9BXF3 1484 aa24.86■■□□□ 1.57
MCPH1-202ENST00000519221 SMARCA4P51532 1647 aa24.42■■□□□ 1.5
MCPH1-202ENST00000519221 NCAPD3P42695 1498 aa24.38■■□□□ 1.49
MCPH1-202ENST00000519221 BAZ1AQ9NRL2 1556 aaPredicted RBP24.37■■□□□ 1.49
MCPH1-202ENST00000519221 SMARCA2P51531 1590 aa24.33■■□□□ 1.49
MCPH1-202ENST00000519221 ATAD2BQ9ULI0 1458 aa24.32■■□□□ 1.48
MCPH1-202ENST00000519221 HMGXB3Q12766 1538 aa24.25■■□□□ 1.47
MCPH1-202ENST00000519221 PEG3Q9GZU2 1588 aa24.21■■□□□ 1.47
MCPH1-202ENST00000519221 MROH2BQ7Z745 1585 aa24.15■■□□□ 1.46
MCPH1-202ENST00000519221 BAZ1BQ9UIG0 1483 aaKnown RBP24.12■■□□□ 1.45
MCPH1-202ENST00000519221 WIZO95785 1651 aa23.89■■□□□ 1.41
MCPH1-202ENST00000519221 ERCC6Q03468 1493 aa23.84■■□□□ 1.41
MCPH1-202ENST00000519221 NESP48681 1621 aa23.81■■□□□ 1.4
MCPH1-202ENST00000519221 LAMC3Q9Y6N6 1575 aa23.8■■□□□ 1.4
MCPH1-202ENST00000519221 RSF1Q96T23 1441 aaPredicted RBP23.79■■□□□ 1.4
MCPH1-202ENST00000519221 CUX2O14529 1486 aa23.73■■□□□ 1.39
MCPH1-202ENST00000519221 TOP2AP11388 1531 aaKnown RBP23.64■■□□□ 1.38
MCPH1-202ENST00000519221 CADPSQ9ULU8 1353 aa23.64■■□□□ 1.37
MCPH1-202ENST00000519221 PDS5BQ9NTI5 1447 aa23.63■■□□□ 1.37
MCPH1-202ENST00000519221 KIF21AQ7Z4S6 1674 aa23.57■■□□□ 1.36
MCPH1-202ENST00000519221 THOC2Q8NI27 1593 aaKnown RBP23.56■■□□□ 1.36
MCPH1-202ENST00000519221 CFTRP13569 1480 aa23.45■■□□□ 1.34
MCPH1-202ENST00000519221 DNAJC5Q9H3Z4 198 aa23.39■■□□□ 1.33
MCPH1-202ENST00000519221 MRC2Q9UBG0 1479 aa23.38■■□□□ 1.33
MCPH1-202ENST00000519221 CEP164Q9UPV0 1460 aa23.36■■□□□ 1.33
MCPH1-202ENST00000519221 FANCD2Q9BXW9 1451 aa23.36■■□□□ 1.33
MCPH1-202ENST00000519221 PRDM2Q13029 1718 aa23.34■■□□□ 1.33
MCPH1-202ENST00000519221 CCDC88BA6NC98 1476 aa23.33■■□□□ 1.33
MCPH1-202ENST00000519221 WDR62O43379 1518 aa23.33■■□□□ 1.32
MCPH1-202ENST00000519221 URB2Q14146 1524 aaKnown RBP23.13■■□□□ 1.29
MCPH1-202ENST00000519221 ABCC8Q09428 1581 aa23■■□□□ 1.27
MCPH1-202ENST00000519221 TOPBP1Q92547 1522 aa22.96■■□□□ 1.27
MCPH1-202ENST00000519221 DNMBPQ6XZF7 1577 aa22.93■■□□□ 1.26
MCPH1-202ENST00000519221 SUPT5HO00267 1087 aaKnown RBP22.92■■□□□ 1.26
MCPH1-202ENST00000519221 IFT140Q96RY7 1462 aa22.9■■□□□ 1.26
MCPH1-202ENST00000519221 ZNF608Q9ULD9 1512 aaPredicted RBP22.76■■□□□ 1.23
MCPH1-202ENST00000519221 TARBP1Q13395 1621 aaKnown RBP22.75■■□□□ 1.23
MCPH1-202ENST00000519221 POLA1P09884 1462 aaPredicted RBP22.74■■□□□ 1.23
MCPH1-202ENST00000519221 EIF4G3O43432 1585 aaKnown RBP22.7■■□□□ 1.22
MCPH1-202ENST00000519221 CUX1P39880 1505 aa22.67■■□□□ 1.22
MCPH1-202ENST00000519221 OSCARQ8IYS5 282 aa22.66■■□□□ 1.22
MCPH1-202ENST00000519221 FGD5Q6ZNL6 1462 aa22.64■■□□□ 1.21
MCPH1-202ENST00000519221 SOGA1O94964 1423 aa22.64■■□□□ 1.21
MCPH1-202ENST00000519221 WDR97A6NE52 1622 aa22.62■■□□□ 1.21
MCPH1-202ENST00000519221 RAD54L2Q9Y4B4 1467 aa22.6■■□□□ 1.21
MCPH1-202ENST00000519221 AQRO60306 1485 aaKnown RBP eCLIP22.6■■□□□ 1.21
MCPH1-202ENST00000519221 TDRD9Q8NDG6 1382 aaKnown RBP22.51■■□□□ 1.19
MCPH1-202ENST00000519221 CHD1O14646 1710 aa22.49■■□□□ 1.19
MCPH1-202ENST00000519221 BIVM-ERCC5R4GMW8 1640 aa22.47■■□□□ 1.19
MCPH1-202ENST00000519221 TOP2BQ02880 1626 aa22.46■■□□□ 1.19
MCPH1-202ENST00000519221 WRNQ14191 1432 aaPredicted RBP eCLIP22.45■■□□□ 1.18
MCPH1-202ENST00000519221 ABCA10Q8WWZ4 1543 aa22.45■■□□□ 1.18
MCPH1-202ENST00000519221 GRIN2BQ13224 1484 aa22.43■■□□□ 1.18
MCPH1-202ENST00000519221 MAGI1Q96QZ7 1491 aaPredicted RBP22.41■■□□□ 1.18
MCPH1-202ENST00000519221 SNAPC4Q5SXM2 1469 aa22.4■■□□□ 1.18
MCPH1-202ENST00000519221 SYNJ1O43426 1573 aa22.39■■□□□ 1.18
MCPH1-202ENST00000519221 GAPVD1Q14C86 1478 aa22.39■■□□□ 1.17
MCPH1-202ENST00000519221 PBRM1Q86U86 1689 aa22.39■■□□□ 1.17
MCPH1-202ENST00000519221 ABCA5Q8WWZ7 1642 aa22.38■■□□□ 1.17
MCPH1-202ENST00000519221 FBLN2P98095 1184 aa22.36■■□□□ 1.17
MCPH1-202ENST00000519221 RIMBP3CA6NJZ7 1639 aa22.34■■□□□ 1.17
MCPH1-202ENST00000519221 RIMBP3BA6NNM3 1639 aa22.34■■□□□ 1.17
MCPH1-202ENST00000519221 RIMBP3Q9UFD9 1639 aa22.34■■□□□ 1.17
MCPH1-202ENST00000519221 TRIM41Q8WV44 630 aa22.33■■□□□ 1.17
MCPH1-202ENST00000519221 SYNJ2O15056 1496 aa22.32■■□□□ 1.16
MCPH1-202ENST00000519221 CHMP7Q8WUX9 453 aaPredicted RBP22.3■■□□□ 1.16
MCPH1-202ENST00000519221 ARHGEF11O15085 1522 aa22.3■■□□□ 1.16
MCPH1-202ENST00000519221 CLASP1Q7Z460 1538 aa22.23■■□□□ 1.15
MCPH1-202ENST00000519221 ERICH3Q5RHP9 1530 aa22.18■■□□□ 1.14
MCPH1-202ENST00000519221 ADAMTS12P58397 1594 aa22.17■■□□□ 1.14
MCPH1-202ENST00000519221 GRIN2AQ12879 1464 aa22.13■■□□□ 1.13
MCPH1-202ENST00000519221 FHAD1B1AJZ9 1412 aa22.13■■□□□ 1.13
MCPH1-202ENST00000519221 ARAP1Q96P48 1450 aa22.09■■□□□ 1.13
MCPH1-202ENST00000519221 CYB5RLQ6IPT4 315 aa22.06■■□□□ 1.12
MCPH1-202ENST00000519221 NUP160Q12769 1436 aa22.06■■□□□ 1.12
MCPH1-202ENST00000519221 CEP170Q5SW79 1584 aa22.02■■□□□ 1.12
MCPH1-202ENST00000519221 KIF27Q86VH2 1401 aa22.01■■□□□ 1.11
MCPH1-202ENST00000519221 CUL7Q14999 1698 aa21.95■■□□□ 1.1
MCPH1-202ENST00000519221 SHROOM2Q13796 1616 aa21.95■■□□□ 1.1
MCPH1-202ENST00000519221 IGF1RP08069 1367 aa21.93■■□□□ 1.1
MCPH1-202ENST00000519221 RUSC2Q8N2Y8 1516 aa21.85■■□□□ 1.09
MCPH1-202ENST00000519221 ERCC6L2Q5T890 1561 aa21.84■■□□□ 1.09
MCPH1-202ENST00000519221 CARMIL1Q5VZK9 1371 aa21.8■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 102.8 ms