RNA–Protein interactions for RNA: ENST00000519112.5

BRD9-217, Transcript of bromodomain containing 9, humanhuman

TSL 3

Gene BRD9, Length 861 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-217ENST00000519112 NISCHQ9Y2I1 1504 aa34.68■■■■□ 3.14
BRD9-217ENST00000519112 CCDC180Q9P1Z9 1646 aa31■■■□□ 2.55
BRD9-217ENST00000519112 ABCC9O60706 1549 aa30.75■■■□□ 2.51
BRD9-217ENST00000519112 RB1CC1Q8TDY2 1594 aa29.35■■■□□ 2.29
BRD9-217ENST00000519112 NACADO15069 1562 aa29.22■■■□□ 2.27
BRD9-217ENST00000519112 DCAF8L2P0C7V8 631 aa29.11■■■□□ 2.25
BRD9-217ENST00000519112 MYO15BQ96JP2 1530 aa28.9■■■□□ 2.22
BRD9-217ENST00000519112 UNC13AQ9UPW8 1703 aa28.82■■■□□ 2.2
BRD9-217ENST00000519112 ZCCHC6Q5VYS8 1495 aaKnown RBP28.79■■■□□ 2.2
BRD9-217ENST00000519112 PABPN1Q86U42 306 aaKnown RBP eCLIP28.68■■■□□ 2.18
BRD9-217ENST00000519112 DNAJC5BQ9UF47 199 aa28.68■■■□□ 2.18
BRD9-217ENST00000519112 DCAF1Q9Y4B6 1507 aa28.64■■■□□ 2.18
BRD9-217ENST00000519112 BICRAQ9NZM4 1560 aa28.58■■■□□ 2.17
BRD9-217ENST00000519112 SCRIBQ14160 1630 aa28.28■■■□□ 2.12
BRD9-217ENST00000519112 SHROOM4Q9ULL8 1493 aa28.09■■■□□ 2.09
BRD9-217ENST00000519112 EIF4G1Q04637 1599 aaKnown RBP27.82■■■□□ 2.04
BRD9-217ENST00000519112 CC2D2AQ9P2K1 1620 aa27.81■■■□□ 2.04
BRD9-217ENST00000519112 CECR2Q9BXF3 1484 aa27.65■■■□□ 2.02
BRD9-217ENST00000519112 SMARCA4P51532 1647 aa27.01■■□□□ 1.91
BRD9-217ENST00000519112 NCAPD3P42695 1498 aa26.99■■□□□ 1.91
BRD9-217ENST00000519112 ATAD2BQ9ULI0 1458 aa26.95■■□□□ 1.91
BRD9-217ENST00000519112 BAZ1AQ9NRL2 1556 aaPredicted RBP26.87■■□□□ 1.89
BRD9-217ENST00000519112 SMARCA2P51531 1590 aa26.85■■□□□ 1.89
BRD9-217ENST00000519112 HMGXB3Q12766 1538 aa26.8■■□□□ 1.88
BRD9-217ENST00000519112 MROH2BQ7Z745 1585 aa26.75■■□□□ 1.87
BRD9-217ENST00000519112 PEG3Q9GZU2 1588 aa26.74■■□□□ 1.87
BRD9-217ENST00000519112 BAZ1BQ9UIG0 1483 aaKnown RBP26.68■■□□□ 1.86
BRD9-217ENST00000519112 NESP48681 1621 aa26.53■■□□□ 1.84
BRD9-217ENST00000519112 ERCC6Q03468 1493 aa26.47■■□□□ 1.83
BRD9-217ENST00000519112 WIZO95785 1651 aa26.47■■□□□ 1.83
BRD9-217ENST00000519112 CUX2O14529 1486 aa26.35■■□□□ 1.81
BRD9-217ENST00000519112 LAMC3Q9Y6N6 1575 aa26.33■■□□□ 1.81
BRD9-217ENST00000519112 RSF1Q96T23 1441 aaPredicted RBP26.28■■□□□ 1.8
BRD9-217ENST00000519112 KIF21AQ7Z4S6 1674 aa26.21■■□□□ 1.79
BRD9-217ENST00000519112 THOC2Q8NI27 1593 aaKnown RBP26.2■■□□□ 1.78
BRD9-217ENST00000519112 CADPSQ9ULU8 1353 aa26.17■■□□□ 1.78
BRD9-217ENST00000519112 PDS5BQ9NTI5 1447 aa26.13■■□□□ 1.77
BRD9-217ENST00000519112 TOP2AP11388 1531 aaKnown RBP26.09■■□□□ 1.77
BRD9-217ENST00000519112 DNAJC5Q9H3Z4 198 aa26.07■■□□□ 1.76
BRD9-217ENST00000519112 CFTRP13569 1480 aa25.94■■□□□ 1.74
BRD9-217ENST00000519112 MRC2Q9UBG0 1479 aa25.91■■□□□ 1.74
BRD9-217ENST00000519112 WDR62O43379 1518 aa25.88■■□□□ 1.73
BRD9-217ENST00000519112 FANCD2Q9BXW9 1451 aa25.87■■□□□ 1.73
BRD9-217ENST00000519112 CEP164Q9UPV0 1460 aa25.85■■□□□ 1.73
BRD9-217ENST00000519112 CCDC88BA6NC98 1476 aa25.82■■□□□ 1.72
BRD9-217ENST00000519112 PRDM2Q13029 1718 aa25.74■■□□□ 1.71
BRD9-217ENST00000519112 URB2Q14146 1524 aaKnown RBP25.68■■□□□ 1.7
BRD9-217ENST00000519112 TOPBP1Q92547 1522 aa25.42■■□□□ 1.66
BRD9-217ENST00000519112 DNMBPQ6XZF7 1577 aa25.35■■□□□ 1.65
BRD9-217ENST00000519112 ABCC8Q09428 1581 aa25.34■■□□□ 1.65
BRD9-217ENST00000519112 IFT140Q96RY7 1462 aa25.34■■□□□ 1.65
BRD9-217ENST00000519112 ZNF608Q9ULD9 1512 aaPredicted RBP25.33■■□□□ 1.65
BRD9-217ENST00000519112 SUPT5HO00267 1087 aaKnown RBP25.27■■□□□ 1.64
BRD9-217ENST00000519112 TARBP1Q13395 1621 aaKnown RBP25.22■■□□□ 1.63
BRD9-217ENST00000519112 OSCARQ8IYS5 282 aa25.19■■□□□ 1.62
BRD9-217ENST00000519112 POLA1P09884 1462 aaPredicted RBP25.19■■□□□ 1.62
BRD9-217ENST00000519112 EIF4G3O43432 1585 aaKnown RBP25.18■■□□□ 1.62
BRD9-217ENST00000519112 AQRO60306 1485 aaKnown RBP eCLIP25.12■■□□□ 1.617e-7■■■■■ 39
BRD9-217ENST00000519112 RAD54L2Q9Y4B4 1467 aa25.11■■□□□ 1.61
BRD9-217ENST00000519112 CUX1P39880 1505 aa25.11■■□□□ 1.61
BRD9-217ENST00000519112 FGD5Q6ZNL6 1462 aa25.07■■□□□ 1.6
BRD9-217ENST00000519112 SOGA1O94964 1423 aa25.05■■□□□ 1.6
BRD9-217ENST00000519112 TRIM41Q8WV44 630 aa25.01■■□□□ 1.59
BRD9-217ENST00000519112 TDRD9Q8NDG6 1382 aaKnown RBP24.99■■□□□ 1.59
BRD9-217ENST00000519112 CHD1O14646 1710 aa24.98■■□□□ 1.59
BRD9-217ENST00000519112 WDR97A6NE52 1622 aa24.92■■□□□ 1.58
BRD9-217ENST00000519112 RIMBP3CA6NJZ7 1639 aa24.9■■□□□ 1.58
BRD9-217ENST00000519112 RIMBP3BA6NNM3 1639 aa24.9■■□□□ 1.58
BRD9-217ENST00000519112 RIMBP3Q9UFD9 1639 aa24.9■■□□□ 1.58
BRD9-217ENST00000519112 SNAPC4Q5SXM2 1469 aa24.85■■□□□ 1.57
BRD9-217ENST00000519112 FBLN2P98095 1184 aa24.84■■□□□ 1.57
BRD9-217ENST00000519112 ARHGEF11O15085 1522 aa24.82■■□□□ 1.56
BRD9-217ENST00000519112 GRIN2BQ13224 1484 aa24.79■■□□□ 1.56
BRD9-217ENST00000519112 ABCA10Q8WWZ4 1543 aa24.79■■□□□ 1.56
BRD9-217ENST00000519112 PBRM1Q86U86 1689 aa24.78■■□□□ 1.56
BRD9-217ENST00000519112 BIVM-ERCC5R4GMW8 1640 aa24.78■■□□□ 1.56
BRD9-217ENST00000519112 SYNJ1O43426 1573 aa24.77■■□□□ 1.56
BRD9-217ENST00000519112 MAGI1Q96QZ7 1491 aaPredicted RBP24.77■■□□□ 1.56
BRD9-217ENST00000519112 TOP2BQ02880 1626 aa24.76■■□□□ 1.55
BRD9-217ENST00000519112 GAPVD1Q14C86 1478 aa24.76■■□□□ 1.55
BRD9-217ENST00000519112 ABCA5Q8WWZ7 1642 aa24.75■■□□□ 1.55
BRD9-217ENST00000519112 WRNQ14191 1432 aaPredicted RBP eCLIP24.75■■□□□ 1.55
BRD9-217ENST00000519112 CHMP7Q8WUX9 453 aaPredicted RBP24.7■■□□□ 1.54
BRD9-217ENST00000519112 SYNJ2O15056 1496 aa24.7■■□□□ 1.54
BRD9-217ENST00000519112 CLASP1Q7Z460 1538 aa24.67■■□□□ 1.54
BRD9-217ENST00000519112 CYB5RLQ6IPT4 315 aa24.61■■□□□ 1.53
BRD9-217ENST00000519112 ARAP1Q96P48 1450 aa24.6■■□□□ 1.53
BRD9-217ENST00000519112 ADAMTS12P58397 1594 aa24.54■■□□□ 1.52
BRD9-217ENST00000519112 GRIN2AQ12879 1464 aa24.5■■□□□ 1.51
BRD9-217ENST00000519112 ERICH3Q5RHP9 1530 aa24.47■■□□□ 1.51
BRD9-217ENST00000519112 FHAD1B1AJZ9 1412 aa24.44■■□□□ 1.5
BRD9-217ENST00000519112 CEP170Q5SW79 1584 aa24.44■■□□□ 1.5
BRD9-217ENST00000519112 NUP160Q12769 1436 aa24.42■■□□□ 1.5
BRD9-217ENST00000519112 ERCC6L2Q5T890 1561 aa24.36■■□□□ 1.49
BRD9-217ENST00000519112 SHROOM2Q13796 1616 aa24.31■■□□□ 1.48
BRD9-217ENST00000519112 IGF1RP08069 1367 aa24.25■■□□□ 1.47
BRD9-217ENST00000519112 KIF27Q86VH2 1401 aa24.24■■□□□ 1.47
BRD9-217ENST00000519112 TRHP20396 242 aaPredicted RBP24.21■■□□□ 1.47
BRD9-217ENST00000519112 RUSC2Q8N2Y8 1516 aa24.19■■□□□ 1.46
BRD9-217ENST00000519112 CUL7Q14999 1698 aa24.17■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 161.4 ms