RNA–Protein interactions for RNA: ENST00000519094.5

POLB-205, Transcript of DNA polymerase beta, humanhuman

TSL 3

Gene POLB, Length 561 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLB-205ENST00000519094 NISCHQ9Y2I1 1504 aa25.78■■□□□ 1.72
POLB-205ENST00000519094 ABCC9O60706 1549 aa24.39■■□□□ 1.49
POLB-205ENST00000519094 DNAJC5BQ9UF47 199 aa23.75■■□□□ 1.39
POLB-205ENST00000519094 CCDC180Q9P1Z9 1646 aa23.51■■□□□ 1.35
POLB-205ENST00000519094 RB1CC1Q8TDY2 1594 aa22.81■■□□□ 1.24
POLB-205ENST00000519094 PABPN1Q86U42 306 aaKnown RBP eCLIP22.57■■□□□ 1.2
POLB-205ENST00000519094 DNAJC5Q9H3Z4 198 aa22.46■■□□□ 1.19
POLB-205ENST00000519094 NACADO15069 1562 aa22.44■■□□□ 1.18
POLB-205ENST00000519094 UNC13AQ9UPW8 1703 aa22.35■■□□□ 1.17
POLB-205ENST00000519094 BICRAQ9NZM4 1560 aa22.24■■□□□ 1.15
POLB-205ENST00000519094 DCAF8L2P0C7V8 631 aa22.09■■□□□ 1.13
POLB-205ENST00000519094 CECR2Q9BXF3 1484 aa22.07■■□□□ 1.12
POLB-205ENST00000519094 CC2D2AQ9P2K1 1620 aa22.01■■□□□ 1.11
POLB-205ENST00000519094 MYO15BQ96JP2 1530 aa21.85■■□□□ 1.09
POLB-205ENST00000519094 SHROOM4Q9ULL8 1493 aa21.8■■□□□ 1.08
POLB-205ENST00000519094 EIF4G1Q04637 1599 aaKnown RBP21.74■■□□□ 1.07
POLB-205ENST00000519094 CUX2O14529 1486 aa21.4■■□□□ 1.02
POLB-205ENST00000519094 SCRIBQ14160 1630 aa21.35■■□□□ 1.01
POLB-205ENST00000519094 DCAF1Q9Y4B6 1507 aa21.24■□□□□ 0.99
POLB-205ENST00000519094 ZCCHC6Q5VYS8 1495 aaKnown RBP21.16■□□□□ 0.98
POLB-205ENST00000519094 ERCC6Q03468 1493 aa21.1■□□□□ 0.97
POLB-205ENST00000519094 TRIM41Q8WV44 630 aa21.04■□□□□ 0.96
POLB-205ENST00000519094 NCAPD3P42695 1498 aa20.75■□□□□ 0.91
POLB-205ENST00000519094 NESP48681 1621 aa20.71■□□□□ 0.91
POLB-205ENST00000519094 THOC2Q8NI27 1593 aaKnown RBP20.69■□□□□ 0.9
POLB-205ENST00000519094 ATAD2BQ9ULI0 1458 aa20.55■□□□□ 0.88
POLB-205ENST00000519094 HMGXB3Q12766 1538 aa20.49■□□□□ 0.87
POLB-205ENST00000519094 SMARCA2P51531 1590 aa20.46■□□□□ 0.87
POLB-205ENST00000519094 LAMC3Q9Y6N6 1575 aa20.42■□□□□ 0.86
POLB-205ENST00000519094 KIF21AQ7Z4S6 1674 aa20.42■□□□□ 0.86
POLB-205ENST00000519094 BAZ1AQ9NRL2 1556 aaPredicted RBP20.32■□□□□ 0.84
POLB-205ENST00000519094 PDS5BQ9NTI5 1447 aa20.31■□□□□ 0.84
POLB-205ENST00000519094 SMARCA4P51532 1647 aa20.29■□□□□ 0.84
POLB-205ENST00000519094 BAZ1BQ9UIG0 1483 aaKnown RBP20.27■□□□□ 0.84
POLB-205ENST00000519094 OSCARQ8IYS5 282 aa20.27■□□□□ 0.84
POLB-205ENST00000519094 MRC2Q9UBG0 1479 aa20.19■□□□□ 0.82
POLB-205ENST00000519094 WDR62O43379 1518 aa20.19■□□□□ 0.82
POLB-205ENST00000519094 RIMBP3CA6NJZ7 1639 aa20.13■□□□□ 0.81
POLB-205ENST00000519094 RIMBP3BA6NNM3 1639 aa20.13■□□□□ 0.81
POLB-205ENST00000519094 RIMBP3Q9UFD9 1639 aa20.13■□□□□ 0.81
POLB-205ENST00000519094 PEG3Q9GZU2 1588 aa20.12■□□□□ 0.81
POLB-205ENST00000519094 CADPSQ9ULU8 1353 aa20.06■□□□□ 0.8
POLB-205ENST00000519094 AEBP2Q6ZN18 517 aaPredicted RBP19.98■□□□□ 0.79
POLB-205ENST00000519094 ARHGEF11O15085 1522 aa19.96■□□□□ 0.79
POLB-205ENST00000519094 CEP164Q9UPV0 1460 aa19.92■□□□□ 0.78
POLB-205ENST00000519094 TRHP20396 242 aaPredicted RBP19.91■□□□□ 0.78
POLB-205ENST00000519094 CYB5RLQ6IPT4 315 aa19.86■□□□□ 0.77
POLB-205ENST00000519094 MROH2BQ7Z745 1585 aa19.85■□□□□ 0.77
POLB-205ENST00000519094 FANCD2Q9BXW9 1451 aa19.83■□□□□ 0.76
POLB-205ENST00000519094 URB2Q14146 1524 aaKnown RBP19.75■□□□□ 0.75
POLB-205ENST00000519094 ARAP1Q96P48 1450 aa19.71■□□□□ 0.75
POLB-205ENST00000519094 CFTRP13569 1480 aa19.65■□□□□ 0.74
POLB-205ENST00000519094 ZNF608Q9ULD9 1512 aaPredicted RBP19.65■□□□□ 0.74
POLB-205ENST00000519094 WIZO95785 1651 aa19.57■□□□□ 0.72
POLB-205ENST00000519094 IFT140Q96RY7 1462 aa19.56■□□□□ 0.72
POLB-205ENST00000519094 RSF1Q96T23 1441 aaPredicted RBP19.53■□□□□ 0.72
POLB-205ENST00000519094 CHD1O14646 1710 aa19.52■□□□□ 0.72
POLB-205ENST00000519094 EIF4G3O43432 1585 aaKnown RBP19.48■□□□□ 0.71
POLB-205ENST00000519094 PRDM2Q13029 1718 aa19.37■□□□□ 0.69
POLB-205ENST00000519094 FBLN2P98095 1184 aa19.36■□□□□ 0.69
POLB-205ENST00000519094 TOPBP1Q92547 1522 aa19.35■□□□□ 0.69
POLB-205ENST00000519094 AQRO60306 1485 aaKnown RBP eCLIP19.35■□□□□ 0.69
POLB-205ENST00000519094 ILDR1Q86SU0 546 aaPredicted RBP19.32■□□□□ 0.68
POLB-205ENST00000519094 CLASP1Q7Z460 1538 aa19.28■□□□□ 0.68
POLB-205ENST00000519094 TARBP1Q13395 1621 aaKnown RBP19.28■□□□□ 0.68
POLB-205ENST00000519094 ABCC8Q09428 1581 aa19.24■□□□□ 0.67
POLB-205ENST00000519094 TOP2AP11388 1531 aaKnown RBP19.24■□□□□ 0.67
POLB-205ENST00000519094 DNMBPQ6XZF7 1577 aa19.19■□□□□ 0.66
POLB-205ENST00000519094 SYNJ1O43426 1573 aa19.15■□□□□ 0.66
POLB-205ENST00000519094 GAPVD1Q14C86 1478 aa19.13■□□□□ 0.65
POLB-205ENST00000519094 POLA1P09884 1462 aaPredicted RBP19.1■□□□□ 0.65
POLB-205ENST00000519094 SNAPC4Q5SXM2 1469 aa19.1■□□□□ 0.65
POLB-205ENST00000519094 CHMP7Q8WUX9 453 aaPredicted RBP19.08■□□□□ 0.64
POLB-205ENST00000519094 TDRD9Q8NDG6 1382 aaKnown RBP19.07■□□□□ 0.64
POLB-205ENST00000519094 RAD54L2Q9Y4B4 1467 aa19.05■□□□□ 0.64
POLB-205ENST00000519094 CCDC88BA6NC98 1476 aa19.04■□□□□ 0.64
POLB-205ENST00000519094 MAGI1Q96QZ7 1491 aaPredicted RBP19.03■□□□□ 0.64
POLB-205ENST00000519094 KIF13AQ9H1H9 1805 aa18.99■□□□□ 0.63
POLB-205ENST00000519094 WDR97A6NE52 1622 aa18.99■□□□□ 0.63
POLB-205ENST00000519094 SOGA1O94964 1423 aa18.99■□□□□ 0.63
POLB-205ENST00000519094 KDM4FA0A1W2PPD8 638 aa18.98■□□□□ 0.63
POLB-205ENST00000519094 SYNJ2O15056 1496 aa18.97■□□□□ 0.63
POLB-205ENST00000519094 GRIN2BQ13224 1484 aa18.93■□□□□ 0.62
POLB-205ENST00000519094 ERCC6L2Q5T890 1561 aa18.92■□□□□ 0.62
POLB-205ENST00000519094 FGD5Q6ZNL6 1462 aa18.84■□□□□ 0.61
POLB-205ENST00000519094 PBRM1Q86U86 1689 aa18.8■□□□□ 0.6
POLB-205ENST00000519094 CEP170Q5SW79 1584 aa18.78■□□□□ 0.6
POLB-205ENST00000519094 ABCC10Q5T3U5 1492 aa18.74■□□□□ 0.59
POLB-205ENST00000519094 FAM69CQ0P6D2 419 aa18.74■□□□□ 0.59
POLB-205ENST00000519094 KDM6BO15054 1643 aa18.72■□□□□ 0.59
POLB-205ENST00000519094 SHROOM2Q13796 1616 aa18.71■□□□□ 0.58
POLB-205ENST00000519094 CUX1P39880 1505 aa18.7■□□□□ 0.58
POLB-205ENST00000519094 GRIN2AQ12879 1464 aa18.69■□□□□ 0.58
POLB-205ENST00000519094 NUP160Q12769 1436 aa18.67■□□□□ 0.58
POLB-205ENST00000519094 DIP2BQ9P265 1576 aa18.67■□□□□ 0.58
POLB-205ENST00000519094 ABCA5Q8WWZ7 1642 aa18.65■□□□□ 0.58
POLB-205ENST00000519094 MAPKBP1O60336 1514 aa18.63■□□□□ 0.57
POLB-205ENST00000519094 HECW2Q9P2P5 1572 aa18.63■□□□□ 0.57
POLB-205ENST00000519094 ABCA10Q8WWZ4 1543 aa18.59■□□□□ 0.57
POLB-205ENST00000519094 TSPOAP1O95153 1857 aa18.58■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms