RNA–Protein interactions for RNA: ENST00000519028.1

TNFRSF10B-204, Transcript of TNF receptor superfamily member 10b, humanhuman

TSL 2

Gene TNFRSF10B, Length 612 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF10B-204ENST00000519028 NISCHQ9Y2I1 1504 aa49.5■■■■■ 5.52
TNFRSF10B-204ENST00000519028 CCDC180Q9P1Z9 1646 aa43.89■■■■■ 4.62
TNFRSF10B-204ENST00000519028 ABCC9O60706 1549 aa42.92■■■■■ 4.46
TNFRSF10B-204ENST00000519028 DCAF8L2P0C7V8 631 aa41.36■■■■■ 4.21
TNFRSF10B-204ENST00000519028 RB1CC1Q8TDY2 1594 aa41.29■■■■■ 4.2
TNFRSF10B-204ENST00000519028 NACADO15069 1562 aa41.29■■■■■ 4.2
TNFRSF10B-204ENST00000519028 ZCCHC6Q5VYS8 1495 aaKnown RBP41.23■■■■■ 4.19
TNFRSF10B-204ENST00000519028 MYO15BQ96JP2 1530 aa41.08■■■■■ 4.17
TNFRSF10B-204ENST00000519028 DCAF1Q9Y4B6 1507 aa40.95■■■■■ 4.15
TNFRSF10B-204ENST00000519028 UNC13AQ9UPW8 1703 aa40.38■■■■■ 4.05
TNFRSF10B-204ENST00000519028 PABPN1Q86U42 306 aaKnown RBP eCLIP40.17■■■■■ 4.02
TNFRSF10B-204ENST00000519028 BICRAQ9NZM4 1560 aa40.09■■■■■ 4.01
TNFRSF10B-204ENST00000519028 SCRIBQ14160 1630 aa40.08■■■■■ 4.01
TNFRSF10B-204ENST00000519028 SHROOM4Q9ULL8 1493 aa39.6■■■■□ 3.93
TNFRSF10B-204ENST00000519028 DNAJC5BQ9UF47 199 aa39.41■■■■□ 3.9
TNFRSF10B-204ENST00000519028 EIF4G1Q04637 1599 aaKnown RBP38.99■■■■□ 3.83
TNFRSF10B-204ENST00000519028 CC2D2AQ9P2K1 1620 aa38.81■■■■□ 3.8
TNFRSF10B-204ENST00000519028 CECR2Q9BXF3 1484 aa38.59■■■■□ 3.77
TNFRSF10B-204ENST00000519028 SMARCA4P51532 1647 aa38.36■■■■□ 3.73
TNFRSF10B-204ENST00000519028 BAZ1AQ9NRL2 1556 aaPredicted RBP38.32■■■■□ 3.73
TNFRSF10B-204ENST00000519028 ATAD2BQ9ULI0 1458 aa38.16■■■■□ 3.7
TNFRSF10B-204ENST00000519028 MROH2BQ7Z745 1585 aa38.16■■■■□ 3.7
TNFRSF10B-204ENST00000519028 NCAPD3P42695 1498 aa38.14■■■■□ 3.7
TNFRSF10B-204ENST00000519028 SMARCA2P51531 1590 aa38.07■■■■□ 3.69
TNFRSF10B-204ENST00000519028 PEG3Q9GZU2 1588 aa38■■■■□ 3.67
TNFRSF10B-204ENST00000519028 HMGXB3Q12766 1538 aa37.9■■■■□ 3.66
TNFRSF10B-204ENST00000519028 BAZ1BQ9UIG0 1483 aaKnown RBP37.82■■■■□ 3.64
TNFRSF10B-204ENST00000519028 RSF1Q96T23 1441 aaPredicted RBP37.78■■■■□ 3.64
TNFRSF10B-204ENST00000519028 WIZO95785 1651 aa37.75■■■■□ 3.63
TNFRSF10B-204ENST00000519028 TOP2AP11388 1531 aaKnown RBP37.31■■■■□ 3.56
TNFRSF10B-204ENST00000519028 NESP48681 1621 aa37.18■■■■□ 3.54
TNFRSF10B-204ENST00000519028 LAMC3Q9Y6N6 1575 aa37.06■■■■□ 3.52
TNFRSF10B-204ENST00000519028 CADPSQ9ULU8 1353 aa37.04■■■■□ 3.52
TNFRSF10B-204ENST00000519028 ERCC6Q03468 1493 aa36.94■■■■□ 3.5
TNFRSF10B-204ENST00000519028 CCDC88BA6NC98 1476 aa36.94■■■■□ 3.5
TNFRSF10B-204ENST00000519028 SUPT5HO00267 1087 aaKnown RBP36.91■■■■□ 3.5
TNFRSF10B-204ENST00000519028 PDS5BQ9NTI5 1447 aa36.83■■■■□ 3.49
TNFRSF10B-204ENST00000519028 CFTRP13569 1480 aa36.82■■■■□ 3.49
TNFRSF10B-204ENST00000519028 KIF21AQ7Z4S6 1674 aa36.7■■■■□ 3.47
TNFRSF10B-204ENST00000519028 FANCD2Q9BXW9 1451 aa36.58■■■■□ 3.45
TNFRSF10B-204ENST00000519028 THOC2Q8NI27 1593 aaKnown RBP36.55■■■■□ 3.44
TNFRSF10B-204ENST00000519028 CUX2O14529 1486 aa36.52■■■■□ 3.44
TNFRSF10B-204ENST00000519028 CEP164Q9UPV0 1460 aa36.5■■■■□ 3.43
TNFRSF10B-204ENST00000519028 PRDM2Q13029 1718 aa36.48■■■■□ 3.43
TNFRSF10B-204ENST00000519028 MRC2Q9UBG0 1479 aa36.43■■■■□ 3.42
TNFRSF10B-204ENST00000519028 WDR62O43379 1518 aa36.3■■■■□ 3.4
TNFRSF10B-204ENST00000519028 URB2Q14146 1524 aaKnown RBP36.22■■■■□ 3.39
TNFRSF10B-204ENST00000519028 TOPBP1Q92547 1522 aa36.01■■■■□ 3.36
TNFRSF10B-204ENST00000519028 ABCC8Q09428 1581 aa36■■■■□ 3.35
TNFRSF10B-204ENST00000519028 DNMBPQ6XZF7 1577 aa35.94■■■■□ 3.34
TNFRSF10B-204ENST00000519028 CUX1P39880 1505 aa35.78■■■■□ 3.32
TNFRSF10B-204ENST00000519028 IFT140Q96RY7 1462 aa35.74■■■■□ 3.31
TNFRSF10B-204ENST00000519028 POLA1P09884 1462 aaPredicted RBP35.71■■■■□ 3.31
TNFRSF10B-204ENST00000519028 FGD5Q6ZNL6 1462 aa35.63■■■■□ 3.29
TNFRSF10B-204ENST00000519028 TARBP1Q13395 1621 aaKnown RBP35.61■■■■□ 3.29
TNFRSF10B-204ENST00000519028 ZNF608Q9ULD9 1512 aaPredicted RBP35.61■■■■□ 3.29
TNFRSF10B-204ENST00000519028 SOGA1O94964 1423 aa35.59■■■■□ 3.29
TNFRSF10B-204ENST00000519028 WRNQ14191 1432 aaPredicted RBP eCLIP35.58■■■■□ 3.29
TNFRSF10B-204ENST00000519028 RAD54L2Q9Y4B4 1467 aa35.58■■■■□ 3.29
TNFRSF10B-204ENST00000519028 TOP2BQ02880 1626 aa35.49■■■■□ 3.27
TNFRSF10B-204ENST00000519028 SYNJ1O43426 1573 aa35.48■■■■□ 3.27
TNFRSF10B-204ENST00000519028 BIVM-ERCC5R4GMW8 1640 aa35.46■■■■□ 3.27
TNFRSF10B-204ENST00000519028 AQRO60306 1485 aaKnown RBP eCLIP35.43■■■■□ 3.267e-7■■■■□ 24.3
TNFRSF10B-204ENST00000519028 EIF4G3O43432 1585 aaKnown RBP35.41■■■■□ 3.26
TNFRSF10B-204ENST00000519028 TDRD9Q8NDG6 1382 aaKnown RBP35.38■■■■□ 3.26
TNFRSF10B-204ENST00000519028 DNAJC5Q9H3Z4 198 aa35.38■■■■□ 3.25
TNFRSF10B-204ENST00000519028 WDR97A6NE52 1622 aa35.3■■■■□ 3.24
TNFRSF10B-204ENST00000519028 ABCA10Q8WWZ4 1543 aa35.3■■■■□ 3.24
TNFRSF10B-204ENST00000519028 GAPVD1Q14C86 1478 aa35.16■■■■□ 3.22
TNFRSF10B-204ENST00000519028 GRIN2BQ13224 1484 aa35.13■■■■□ 3.21
TNFRSF10B-204ENST00000519028 ABCA5Q8WWZ7 1642 aa35.12■■■■□ 3.21
TNFRSF10B-204ENST00000519028 OSCARQ8IYS5 282 aa35.11■■■■□ 3.21
TNFRSF10B-204ENST00000519028 SNAPC4Q5SXM2 1469 aa35.05■■■■□ 3.2
TNFRSF10B-204ENST00000519028 PBRM1Q86U86 1689 aa35.03■■■■□ 3.2
TNFRSF10B-204ENST00000519028 MAGI1Q96QZ7 1491 aaPredicted RBP35.01■■■■□ 3.19
TNFRSF10B-204ENST00000519028 FBLN2P98095 1184 aa34.98■■■■□ 3.19
TNFRSF10B-204ENST00000519028 CHD1O14646 1710 aa34.95■■■■□ 3.19
TNFRSF10B-204ENST00000519028 CHMP7Q8WUX9 453 aaPredicted RBP34.91■■■■□ 3.18
TNFRSF10B-204ENST00000519028 SYNJ2O15056 1496 aa34.89■■■■□ 3.18
TNFRSF10B-204ENST00000519028 ERICH3Q5RHP9 1530 aa34.86■■■■□ 3.17
TNFRSF10B-204ENST00000519028 TRIM41Q8WV44 630 aa34.85■■■■□ 3.17
TNFRSF10B-204ENST00000519028 KIF27Q86VH2 1401 aa34.82■■■■□ 3.17
TNFRSF10B-204ENST00000519028 ADAMTS12P58397 1594 aa34.76■■■■□ 3.16
TNFRSF10B-204ENST00000519028 FHAD1B1AJZ9 1412 aa34.75■■■■□ 3.15
TNFRSF10B-204ENST00000519028 IGF1RP08069 1367 aa34.74■■■■□ 3.15
TNFRSF10B-204ENST00000519028 GRIN2AQ12879 1464 aa34.67■■■■□ 3.14
TNFRSF10B-204ENST00000519028 RUSC2Q8N2Y8 1516 aa34.6■■■■□ 3.13
TNFRSF10B-204ENST00000519028 CLASP1Q7Z460 1538 aa34.6■■■■□ 3.13
TNFRSF10B-204ENST00000519028 CHIC1Q5VXU3 224 aa34.54■■■■□ 3.12
TNFRSF10B-204ENST00000519028 CUL7Q14999 1698 aa34.54■■■■□ 3.12
TNFRSF10B-204ENST00000519028 NUP160Q12769 1436 aa34.53■■■■□ 3.12
TNFRSF10B-204ENST00000519028 CARMIL1Q5VZK9 1371 aa34.5■■■■□ 3.11
TNFRSF10B-204ENST00000519028 CEP170Q5SW79 1584 aa34.5■■■■□ 3.11
TNFRSF10B-204ENST00000519028 ARHGEF11O15085 1522 aa34.48■■■■□ 3.11
TNFRSF10B-204ENST00000519028 RIMBP3CA6NJZ7 1639 aa34.47■■■■□ 3.11
TNFRSF10B-204ENST00000519028 RIMBP3BA6NNM3 1639 aa34.47■■■■□ 3.11
TNFRSF10B-204ENST00000519028 RIMBP3Q9UFD9 1639 aa34.47■■■■□ 3.11
TNFRSF10B-204ENST00000519028 RAPGEF2Q9Y4G8 1499 aa34.28■■■■□ 3.08
TNFRSF10B-204ENST00000519028 SHROOM2Q13796 1616 aa34.24■■■■□ 3.07
TNFRSF10B-204ENST00000519028 CSRNP3Q8WYN3 585 aa34.24■■■■□ 3.07
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms