RNA–Protein interactions for RNA: ENST00000519008.5

LINC00293-203, long intergenic non-protein coding RNA 293, humanhuman

TSL 4

Gene LINC00293, Length 575 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00293-203ENST00000519008 NISCHQ9Y2I1 1504 aa22.11■■□□□ 1.13
LINC00293-203ENST00000519008 ABCC9O60706 1549 aa20.73■□□□□ 0.91
LINC00293-203ENST00000519008 CCDC180Q9P1Z9 1646 aa20.13■□□□□ 0.81
LINC00293-203ENST00000519008 DNAJC5BQ9UF47 199 aa20.09■□□□□ 0.81
LINC00293-203ENST00000519008 RB1CC1Q8TDY2 1594 aa19.49■□□□□ 0.71
LINC00293-203ENST00000519008 NACADO15069 1562 aa19.21■□□□□ 0.67
LINC00293-203ENST00000519008 PABPN1Q86U42 306 aaKnown RBP eCLIP19.19■□□□□ 0.66
LINC00293-203ENST00000519008 DNAJC5Q9H3Z4 198 aa18.98■□□□□ 0.63
LINC00293-203ENST00000519008 UNC13AQ9UPW8 1703 aa18.97■□□□□ 0.63
LINC00293-203ENST00000519008 BICRAQ9NZM4 1560 aa18.94■□□□□ 0.62
LINC00293-203ENST00000519008 DCAF8L2P0C7V8 631 aa18.84■□□□□ 0.61
LINC00293-203ENST00000519008 MYO15BQ96JP2 1530 aa18.79■□□□□ 0.6
LINC00293-203ENST00000519008 CECR2Q9BXF3 1484 aa18.79■□□□□ 0.6
LINC00293-203ENST00000519008 SHROOM4Q9ULL8 1493 aa18.71■□□□□ 0.59
LINC00293-203ENST00000519008 CC2D2AQ9P2K1 1620 aa18.71■□□□□ 0.59
LINC00293-203ENST00000519008 EIF4G1Q04637 1599 aaKnown RBP18.53■□□□□ 0.56
LINC00293-203ENST00000519008 DCAF1Q9Y4B6 1507 aa18.28■□□□□ 0.52
LINC00293-203ENST00000519008 SCRIBQ14160 1630 aa18.23■□□□□ 0.51
LINC00293-203ENST00000519008 CUX2O14529 1486 aa18.23■□□□□ 0.51
LINC00293-203ENST00000519008 ZCCHC6Q5VYS8 1495 aaKnown RBP18.2■□□□□ 0.5
LINC00293-203ENST00000519008 ERCC6Q03468 1493 aa17.96■□□□□ 0.47
LINC00293-203ENST00000519008 NCAPD3P42695 1498 aa17.77■□□□□ 0.44
LINC00293-203ENST00000519008 TRIM41Q8WV44 630 aa17.76■□□□□ 0.43
LINC00293-203ENST00000519008 NESP48681 1621 aa17.62■□□□□ 0.41
LINC00293-203ENST00000519008 THOC2Q8NI27 1593 aaKnown RBP17.62■□□□□ 0.41
LINC00293-203ENST00000519008 ATAD2BQ9ULI0 1458 aa17.59■□□□□ 0.41
LINC00293-203ENST00000519008 HMGXB3Q12766 1538 aa17.57■□□□□ 0.4
LINC00293-203ENST00000519008 SMARCA2P51531 1590 aa17.5■□□□□ 0.39
LINC00293-203ENST00000519008 LAMC3Q9Y6N6 1575 aa17.44■□□□□ 0.38
LINC00293-203ENST00000519008 PDS5BQ9NTI5 1447 aa17.38■□□□□ 0.37
LINC00293-203ENST00000519008 SMARCA4P51532 1647 aa17.37■□□□□ 0.37
LINC00293-203ENST00000519008 BAZ1BQ9UIG0 1483 aaKnown RBP17.36■□□□□ 0.37
LINC00293-203ENST00000519008 KIF21AQ7Z4S6 1674 aa17.35■□□□□ 0.37
LINC00293-203ENST00000519008 PEG3Q9GZU2 1588 aa17.27■□□□□ 0.35
LINC00293-203ENST00000519008 BAZ1AQ9NRL2 1556 aaPredicted RBP17.27■□□□□ 0.35
LINC00293-203ENST00000519008 MRC2Q9UBG0 1479 aa17.25■□□□□ 0.35
LINC00293-203ENST00000519008 OSCARQ8IYS5 282 aa17.25■□□□□ 0.35
LINC00293-203ENST00000519008 WDR62O43379 1518 aa17.24■□□□□ 0.35
LINC00293-203ENST00000519008 CADPSQ9ULU8 1353 aa17.17■□□□□ 0.34
LINC00293-203ENST00000519008 RIMBP3CA6NJZ7 1639 aa17.07■□□□□ 0.32
LINC00293-203ENST00000519008 RIMBP3BA6NNM3 1639 aa17.07■□□□□ 0.32
LINC00293-203ENST00000519008 RIMBP3Q9UFD9 1639 aa17.07■□□□□ 0.32
LINC00293-203ENST00000519008 CEP164Q9UPV0 1460 aa17.03■□□□□ 0.32
LINC00293-203ENST00000519008 MROH2BQ7Z745 1585 aa17■□□□□ 0.31
LINC00293-203ENST00000519008 ARHGEF11O15085 1522 aa16.97■□□□□ 0.31
LINC00293-203ENST00000519008 FANCD2Q9BXW9 1451 aa16.96■□□□□ 0.31
LINC00293-203ENST00000519008 AEBP2Q6ZN18 517 aaPredicted RBP16.87■□□□□ 0.29
LINC00293-203ENST00000519008 URB2Q14146 1524 aaKnown RBP16.86■□□□□ 0.29
LINC00293-203ENST00000519008 TRHP20396 242 aaPredicted RBP16.86■□□□□ 0.29
LINC00293-203ENST00000519008 CYB5RLQ6IPT4 315 aa16.85■□□□□ 0.29
LINC00293-203ENST00000519008 CFTRP13569 1480 aa16.85■□□□□ 0.29
LINC00293-203ENST00000519008 ARAP1Q96P48 1450 aa16.76■□□□□ 0.27
LINC00293-203ENST00000519008 ZNF608Q9ULD9 1512 aaPredicted RBP16.75■□□□□ 0.27
LINC00293-203ENST00000519008 IFT140Q96RY7 1462 aa16.74■□□□□ 0.27
LINC00293-203ENST00000519008 WIZO95785 1651 aa16.72■□□□□ 0.27
LINC00293-203ENST00000519008 RSF1Q96T23 1441 aaPredicted RBP16.7■□□□□ 0.26
LINC00293-203ENST00000519008 EIF4G3O43432 1585 aaKnown RBP16.61■□□□□ 0.25
LINC00293-203ENST00000519008 CHD1O14646 1710 aa16.57■□□□□ 0.24
LINC00293-203ENST00000519008 TOPBP1Q92547 1522 aa16.56■□□□□ 0.24
LINC00293-203ENST00000519008 PRDM2Q13029 1718 aa16.53■□□□□ 0.24
LINC00293-203ENST00000519008 TOP2AP11388 1531 aaKnown RBP16.52■□□□□ 0.24
LINC00293-203ENST00000519008 AQRO60306 1485 aaKnown RBP eCLIP16.51■□□□□ 0.23
LINC00293-203ENST00000519008 ABCC8Q09428 1581 aa16.51■□□□□ 0.23
LINC00293-203ENST00000519008 FBLN2P98095 1184 aa16.49■□□□□ 0.23
LINC00293-203ENST00000519008 TARBP1Q13395 1621 aaKnown RBP16.46■□□□□ 0.23
LINC00293-203ENST00000519008 CLASP1Q7Z460 1538 aa16.45■□□□□ 0.22
LINC00293-203ENST00000519008 DNMBPQ6XZF7 1577 aa16.43■□□□□ 0.22
LINC00293-203ENST00000519008 POLA1P09884 1462 aaPredicted RBP16.35■□□□□ 0.21
LINC00293-203ENST00000519008 SYNJ1O43426 1573 aa16.35■□□□□ 0.21
LINC00293-203ENST00000519008 CCDC88BA6NC98 1476 aa16.34■□□□□ 0.21
LINC00293-203ENST00000519008 SNAPC4Q5SXM2 1469 aa16.32■□□□□ 0.2
LINC00293-203ENST00000519008 GAPVD1Q14C86 1478 aa16.31■□□□□ 0.2
LINC00293-203ENST00000519008 TDRD9Q8NDG6 1382 aaKnown RBP16.3■□□□□ 0.2
LINC00293-203ENST00000519008 CHMP7Q8WUX9 453 aaPredicted RBP16.3■□□□□ 0.2
LINC00293-203ENST00000519008 WDR97A6NE52 1622 aa16.3■□□□□ 0.2
LINC00293-203ENST00000519008 MAGI1Q96QZ7 1491 aaPredicted RBP16.29■□□□□ 0.2
LINC00293-203ENST00000519008 RAD54L2Q9Y4B4 1467 aa16.28■□□□□ 0.2
LINC00293-203ENST00000519008 ILDR1Q86SU0 546 aaPredicted RBP16.27■□□□□ 0.2
LINC00293-203ENST00000519008 SOGA1O94964 1423 aa16.26■□□□□ 0.19
LINC00293-203ENST00000519008 SYNJ2O15056 1496 aa16.24■□□□□ 0.19
LINC00293-203ENST00000519008 GRIN2BQ13224 1484 aa16.21■□□□□ 0.19
LINC00293-203ENST00000519008 FGD5Q6ZNL6 1462 aa16.14■□□□□ 0.17
LINC00293-203ENST00000519008 ERCC6L2Q5T890 1561 aa16.09■□□□□ 0.17
LINC00293-203ENST00000519008 KDM4FA0A1W2PPD8 638 aa16.09■□□□□ 0.17
LINC00293-203ENST00000519008 KIF13AQ9H1H9 1805 aa16.09■□□□□ 0.17
LINC00293-203ENST00000519008 CEP170Q5SW79 1584 aa16.03■□□□□ 0.16
LINC00293-203ENST00000519008 PBRM1Q86U86 1689 aa16.02■□□□□ 0.16
LINC00293-203ENST00000519008 CUX1P39880 1505 aa16.02■□□□□ 0.15
LINC00293-203ENST00000519008 GRIN2AQ12879 1464 aa16■□□□□ 0.15
LINC00293-203ENST00000519008 NUP160Q12769 1436 aa16■□□□□ 0.15
LINC00293-203ENST00000519008 ABCC10Q5T3U5 1492 aa15.98■□□□□ 0.15
LINC00293-203ENST00000519008 SHROOM2Q13796 1616 aa15.98■□□□□ 0.15
LINC00293-203ENST00000519008 FAM69CQ0P6D2 419 aa15.96■□□□□ 0.15
LINC00293-203ENST00000519008 ABCA5Q8WWZ7 1642 aa15.96■□□□□ 0.15
LINC00293-203ENST00000519008 ABCA10Q8WWZ4 1543 aa15.95■□□□□ 0.14
LINC00293-203ENST00000519008 MAPKBP1O60336 1514 aa15.91■□□□□ 0.14
LINC00293-203ENST00000519008 KDM6BO15054 1643 aa15.9■□□□□ 0.14
LINC00293-203ENST00000519008 DIP2BQ9P265 1576 aa15.89■□□□□ 0.13
LINC00293-203ENST00000519008 ADAMTS12P58397 1594 aa15.88■□□□□ 0.13
LINC00293-203ENST00000519008 PRG4Q92954 1404 aaPredicted RBP15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms