RNA–Protein interactions for RNA: ENST00000518908.5

ARMC1-203, Transcript of armadillo repeat containing 1, humanhuman

TSL 3

Gene ARMC1, Length 1,050 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARMC1-203ENST00000518908 NISCHQ9Y2I1 1504 aa45■■■■■ 4.79
ARMC1-203ENST00000518908 ABCC9O60706 1549 aa40.57■■■■■ 4.08
ARMC1-203ENST00000518908 CCDC180Q9P1Z9 1646 aa40.56■■■■■ 4.08
ARMC1-203ENST00000518908 RB1CC1Q8TDY2 1594 aa38.63■■■■□ 3.77
ARMC1-203ENST00000518908 NACADO15069 1562 aa38.34■■■■□ 3.73
ARMC1-203ENST00000518908 DNAJC5BQ9UF47 199 aa38.19■■■■□ 3.7
ARMC1-203ENST00000518908 MYO15BQ96JP2 1530 aa37.82■■■■□ 3.65
ARMC1-203ENST00000518908 DCAF8L2P0C7V8 631 aa37.81■■■■□ 3.64
ARMC1-203ENST00000518908 UNC13AQ9UPW8 1703 aa37.8■■■■□ 3.64
ARMC1-203ENST00000518908 PABPN1Q86U42 306 aaKnown RBP eCLIP37.66■■■■□ 3.62
ARMC1-203ENST00000518908 BICRAQ9NZM4 1560 aa37.53■■■■□ 3.6
ARMC1-203ENST00000518908 ZCCHC6Q5VYS8 1495 aaKnown RBP37.28■■■■□ 3.56
ARMC1-203ENST00000518908 DCAF1Q9Y4B6 1507 aa37.25■■■■□ 3.55
ARMC1-203ENST00000518908 SHROOM4Q9ULL8 1493 aa37.09■■■■□ 3.53
ARMC1-203ENST00000518908 SCRIBQ14160 1630 aa36.82■■■■□ 3.49
ARMC1-203ENST00000518908 CC2D2AQ9P2K1 1620 aa36.72■■■■□ 3.47
ARMC1-203ENST00000518908 CECR2Q9BXF3 1484 aa36.61■■■■□ 3.45
ARMC1-203ENST00000518908 EIF4G1Q04637 1599 aaKnown RBP36.61■■■■□ 3.45
ARMC1-203ENST00000518908 NCAPD3P42695 1498 aa35.38■■■■□ 3.25
ARMC1-203ENST00000518908 DNAJC5Q9H3Z4 198 aa35.26■■■■□ 3.24
ARMC1-203ENST00000518908 ATAD2BQ9ULI0 1458 aa35.22■■■■□ 3.23
ARMC1-203ENST00000518908 SMARCA4P51532 1647 aa35.17■■■■□ 3.22
ARMC1-203ENST00000518908 CUX2O14529 1486 aa35.16■■■■□ 3.22
ARMC1-203ENST00000518908 SMARCA2P51531 1590 aa35.14■■■■□ 3.22
ARMC1-203ENST00000518908 HMGXB3Q12766 1538 aa35.14■■■■□ 3.22
ARMC1-203ENST00000518908 ERCC6Q03468 1493 aa35.05■■■■□ 3.2
ARMC1-203ENST00000518908 BAZ1AQ9NRL2 1556 aaPredicted RBP34.96■■■■□ 3.19
ARMC1-203ENST00000518908 PEG3Q9GZU2 1588 aa34.89■■■■□ 3.18
ARMC1-203ENST00000518908 BAZ1BQ9UIG0 1483 aaKnown RBP34.85■■■■□ 3.17
ARMC1-203ENST00000518908 NESP48681 1621 aa34.81■■■■□ 3.16
ARMC1-203ENST00000518908 MROH2BQ7Z745 1585 aa34.64■■■■□ 3.14
ARMC1-203ENST00000518908 LAMC3Q9Y6N6 1575 aa34.63■■■■□ 3.13
ARMC1-203ENST00000518908 THOC2Q8NI27 1593 aaKnown RBP34.61■■■■□ 3.13
ARMC1-203ENST00000518908 KIF21AQ7Z4S6 1674 aa34.43■■■■□ 3.1
ARMC1-203ENST00000518908 PDS5BQ9NTI5 1447 aa34.38■■■■□ 3.09
ARMC1-203ENST00000518908 CADPSQ9ULU8 1353 aa34.24■■■■□ 3.07
ARMC1-203ENST00000518908 WIZO95785 1651 aa34.22■■■■□ 3.07
ARMC1-203ENST00000518908 MRC2Q9UBG0 1479 aa34.12■■■■□ 3.05
ARMC1-203ENST00000518908 WDR62O43379 1518 aa34.09■■■■□ 3.05
ARMC1-203ENST00000518908 CEP164Q9UPV0 1460 aa33.93■■■■□ 3.02
ARMC1-203ENST00000518908 CFTRP13569 1480 aa33.86■■■■□ 3.01
ARMC1-203ENST00000518908 FANCD2Q9BXW9 1451 aa33.86■■■■□ 3.01
ARMC1-203ENST00000518908 RSF1Q96T23 1441 aaPredicted RBP33.85■■■■□ 3.01
ARMC1-203ENST00000518908 TOP2AP11388 1531 aaKnown RBP33.82■■■■□ 3
ARMC1-203ENST00000518908 URB2Q14146 1524 aaKnown RBP33.61■■■□□ 2.97
ARMC1-203ENST00000518908 PRDM2Q13029 1718 aa33.59■■■□□ 2.97
ARMC1-203ENST00000518908 TRIM41Q8WV44 630 aa33.51■■■□□ 2.95
ARMC1-203ENST00000518908 OSCARQ8IYS5 282 aa33.39■■■□□ 2.94
ARMC1-203ENST00000518908 CCDC88BA6NC98 1476 aa33.37■■■□□ 2.93
ARMC1-203ENST00000518908 IFT140Q96RY7 1462 aa33.27■■■□□ 2.92
ARMC1-203ENST00000518908 TOPBP1Q92547 1522 aa33.22■■■□□ 2.91
ARMC1-203ENST00000518908 ZNF608Q9ULD9 1512 aaPredicted RBP33.2■■■□□ 2.91
ARMC1-203ENST00000518908 ABCC8Q09428 1581 aa33.16■■■□□ 2.9
ARMC1-203ENST00000518908 DNMBPQ6XZF7 1577 aa33.11■■■□□ 2.89
ARMC1-203ENST00000518908 RIMBP3CA6NJZ7 1639 aa33.07■■■□□ 2.88
ARMC1-203ENST00000518908 RIMBP3BA6NNM3 1639 aa33.07■■■□□ 2.88
ARMC1-203ENST00000518908 RIMBP3Q9UFD9 1639 aa33.07■■■□□ 2.88
ARMC1-203ENST00000518908 EIF4G3O43432 1585 aaKnown RBP33.07■■■□□ 2.88
ARMC1-203ENST00000518908 TARBP1Q13395 1621 aaKnown RBP32.98■■■□□ 2.87
ARMC1-203ENST00000518908 ARHGEF11O15085 1522 aa32.94■■■□□ 2.86
ARMC1-203ENST00000518908 POLA1P09884 1462 aaPredicted RBP32.86■■■□□ 2.85
ARMC1-203ENST00000518908 CHD1O14646 1710 aa32.85■■■□□ 2.85
ARMC1-203ENST00000518908 AQRO60306 1485 aaKnown RBP eCLIP32.84■■■□□ 2.85
ARMC1-203ENST00000518908 WDR97A6NE52 1622 aa32.7■■■□□ 2.83
ARMC1-203ENST00000518908 RAD54L2Q9Y4B4 1467 aa32.68■■■□□ 2.82
ARMC1-203ENST00000518908 SOGA1O94964 1423 aa32.65■■■□□ 2.82
ARMC1-203ENST00000518908 FGD5Q6ZNL6 1462 aa32.61■■■□□ 2.81
ARMC1-203ENST00000518908 ARAP1Q96P48 1450 aa32.6■■■□□ 2.81
ARMC1-203ENST00000518908 TDRD9Q8NDG6 1382 aaKnown RBP32.58■■■□□ 2.81
ARMC1-203ENST00000518908 CYB5RLQ6IPT4 315 aa32.58■■■□□ 2.81
ARMC1-203ENST00000518908 CUX1P39880 1505 aa32.57■■■□□ 2.8
ARMC1-203ENST00000518908 FBLN2P98095 1184 aa32.56■■■□□ 2.8
ARMC1-203ENST00000518908 SNAPC4Q5SXM2 1469 aa32.54■■■□□ 2.8
ARMC1-203ENST00000518908 MAGI1Q96QZ7 1491 aaPredicted RBP32.5■■■□□ 2.79
ARMC1-203ENST00000518908 CLASP1Q7Z460 1538 aa32.5■■■□□ 2.79
ARMC1-203ENST00000518908 GRIN2BQ13224 1484 aa32.44■■■□□ 2.78
ARMC1-203ENST00000518908 SYNJ1O43426 1573 aa32.43■■■□□ 2.78
ARMC1-203ENST00000518908 SYNJ2O15056 1496 aa32.38■■■□□ 2.77
ARMC1-203ENST00000518908 PBRM1Q86U86 1689 aa32.35■■■□□ 2.77
ARMC1-203ENST00000518908 CHMP7Q8WUX9 453 aaPredicted RBP32.35■■■□□ 2.77
ARMC1-203ENST00000518908 GAPVD1Q14C86 1478 aa32.29■■■□□ 2.76
ARMC1-203ENST00000518908 ABCA5Q8WWZ7 1642 aa32.28■■■□□ 2.76
ARMC1-203ENST00000518908 ABCA10Q8WWZ4 1543 aa32.27■■■□□ 2.76
ARMC1-203ENST00000518908 TRHP20396 242 aaPredicted RBP32.24■■■□□ 2.75
ARMC1-203ENST00000518908 BIVM-ERCC5R4GMW8 1640 aa32.06■■■□□ 2.72
ARMC1-203ENST00000518908 WRNQ14191 1432 aaPredicted RBP eCLIP32.06■■■□□ 2.72
ARMC1-203ENST00000518908 TOP2BQ02880 1626 aa32.04■■■□□ 2.72
ARMC1-203ENST00000518908 GRIN2AQ12879 1464 aa32.03■■■□□ 2.72
ARMC1-203ENST00000518908 ADAMTS12P58397 1594 aa32.03■■■□□ 2.72
ARMC1-203ENST00000518908 SUPT5HO00267 1087 aaKnown RBP32.02■■■□□ 2.72
ARMC1-203ENST00000518908 NUP160Q12769 1436 aa31.96■■■□□ 2.71
ARMC1-203ENST00000518908 CEP170Q5SW79 1584 aa31.94■■■□□ 2.7
ARMC1-203ENST00000518908 ERCC6L2Q5T890 1561 aa31.91■■■□□ 2.7
ARMC1-203ENST00000518908 FHAD1B1AJZ9 1412 aa31.89■■■□□ 2.7
ARMC1-203ENST00000518908 SHROOM2Q13796 1616 aa31.89■■■□□ 2.7
ARMC1-203ENST00000518908 ERICH3Q5RHP9 1530 aa31.88■■■□□ 2.69
ARMC1-203ENST00000518908 RUSC2Q8N2Y8 1516 aa31.59■■■□□ 2.65
ARMC1-203ENST00000518908 PRG4Q92954 1404 aaPredicted RBP31.59■■■□□ 2.65
ARMC1-203ENST00000518908 KIF13AQ9H1H9 1805 aa31.54■■■□□ 2.64
ARMC1-203ENST00000518908 JPH4Q96JJ6 628 aa31.52■■■□□ 2.64
Retrieved 100 of 20,778 RNA–protein pairs in 195.8 ms