RNA–Protein interactions for RNA: ENST00000518870.1

RDH10-202, Transcript of retinol dehydrogenase 10, humanhuman

TSL 2

Gene RDH10, Length 610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH10-202ENST00000518870 NISCHQ9Y2I1 1504 aa25.25■■□□□ 1.63
RDH10-202ENST00000518870 ABCC9O60706 1549 aa24.45■■□□□ 1.5
RDH10-202ENST00000518870 DNAJC5BQ9UF47 199 aa23.97■■□□□ 1.43
RDH10-202ENST00000518870 CCDC180Q9P1Z9 1646 aa23.21■■□□□ 1.31
RDH10-202ENST00000518870 CHIC1Q5VXU3 224 aa22.8■■□□□ 1.24
RDH10-202ENST00000518870 AEBP2Q6ZN18 517 aaPredicted RBP22.79■■□□□ 1.24
RDH10-202ENST00000518870 DNAJC5Q9H3Z4 198 aa22.76■■□□□ 1.23
RDH10-202ENST00000518870 RB1CC1Q8TDY2 1594 aa22.65■■□□□ 1.22
RDH10-202ENST00000518870 PABPN1Q86U42 306 aaKnown RBP eCLIP22.54■■□□□ 1.2
RDH10-202ENST00000518870 UNC13AQ9UPW8 1703 aa22.32■■□□□ 1.16
RDH10-202ENST00000518870 NACADO15069 1562 aa22.16■■□□□ 1.14
RDH10-202ENST00000518870 BICRAQ9NZM4 1560 aa22.12■■□□□ 1.13
RDH10-202ENST00000518870 CECR2Q9BXF3 1484 aa22.09■■□□□ 1.13
RDH10-202ENST00000518870 CC2D2AQ9P2K1 1620 aa22.02■■□□□ 1.12
RDH10-202ENST00000518870 DCAF8L2P0C7V8 631 aa21.85■■□□□ 1.09
RDH10-202ENST00000518870 EIF4G1Q04637 1599 aaKnown RBP21.65■■□□□ 1.06
RDH10-202ENST00000518870 SHROOM4Q9ULL8 1493 aa21.49■■□□□ 1.03
RDH10-202ENST00000518870 CUX2O14529 1486 aa21.45■■□□□ 1.02
RDH10-202ENST00000518870 TRIM41Q8WV44 630 aa21.41■■□□□ 1.02
RDH10-202ENST00000518870 MYO15BQ96JP2 1530 aa21.37■■□□□ 1.01
RDH10-202ENST00000518870 SCRIBQ14160 1630 aa21.19■□□□□ 0.98
RDH10-202ENST00000518870 ERCC6Q03468 1493 aa21.13■□□□□ 0.97
RDH10-202ENST00000518870 THOC2Q8NI27 1593 aaKnown RBP20.72■□□□□ 0.91
RDH10-202ENST00000518870 ZCCHC6Q5VYS8 1495 aaKnown RBP20.69■□□□□ 0.9
RDH10-202ENST00000518870 DCAF1Q9Y4B6 1507 aa20.69■□□□□ 0.9
RDH10-202ENST00000518870 NESP48681 1621 aa20.69■□□□□ 0.9
RDH10-202ENST00000518870 SMARCA2P51531 1590 aa20.52■□□□□ 0.88
RDH10-202ENST00000518870 NCAPD3P42695 1498 aa20.44■□□□□ 0.86
RDH10-202ENST00000518870 KIF21AQ7Z4S6 1674 aa20.43■□□□□ 0.86
RDH10-202ENST00000518870 BAZ1AQ9NRL2 1556 aaPredicted RBP20.42■□□□□ 0.86
RDH10-202ENST00000518870 RIMBP3CA6NJZ7 1639 aa20.28■□□□□ 0.84
RDH10-202ENST00000518870 RIMBP3BA6NNM3 1639 aa20.28■□□□□ 0.84
RDH10-202ENST00000518870 RIMBP3Q9UFD9 1639 aa20.28■□□□□ 0.84
RDH10-202ENST00000518870 ATAD2BQ9ULI0 1458 aa20.28■□□□□ 0.84
RDH10-202ENST00000518870 HMGXB3Q12766 1538 aa20.24■□□□□ 0.83
RDH10-202ENST00000518870 LAMC3Q9Y6N6 1575 aa20.24■□□□□ 0.83
RDH10-202ENST00000518870 OSCARQ8IYS5 282 aa20.2■□□□□ 0.82
RDH10-202ENST00000518870 PDS5BQ9NTI5 1447 aa20.09■□□□□ 0.81
RDH10-202ENST00000518870 WDR62O43379 1518 aa20.08■□□□□ 0.81
RDH10-202ENST00000518870 TRHP20396 242 aaPredicted RBP20.08■□□□□ 0.81
RDH10-202ENST00000518870 MRC2Q9UBG0 1479 aa20.07■□□□□ 0.8
RDH10-202ENST00000518870 ARHGEF11O15085 1522 aa20.03■□□□□ 0.8
RDH10-202ENST00000518870 BAZ1BQ9UIG0 1483 aaKnown RBP20.03■□□□□ 0.8
RDH10-202ENST00000518870 SMARCA4P51532 1647 aa20.02■□□□□ 0.79
RDH10-202ENST00000518870 PHF23Q9BUL5 403 aaPredicted RBP19.98■□□□□ 0.79
RDH10-202ENST00000518870 CYB5RLQ6IPT4 315 aa19.9■□□□□ 0.78
RDH10-202ENST00000518870 ARAP1Q96P48 1450 aa19.78■□□□□ 0.76
RDH10-202ENST00000518870 ILDR1Q86SU0 546 aaPredicted RBP19.77■□□□□ 0.76
RDH10-202ENST00000518870 CADPSQ9ULU8 1353 aa19.77■□□□□ 0.76
RDH10-202ENST00000518870 CEP164Q9UPV0 1460 aa19.76■□□□□ 0.75
RDH10-202ENST00000518870 PEG3Q9GZU2 1588 aa19.74■□□□□ 0.75
RDH10-202ENST00000518870 FANCD2Q9BXW9 1451 aa19.63■□□□□ 0.73
RDH10-202ENST00000518870 URB2Q14146 1524 aaKnown RBP19.59■□□□□ 0.73
RDH10-202ENST00000518870 ZNF608Q9ULD9 1512 aaPredicted RBP19.56■□□□□ 0.72
RDH10-202ENST00000518870 CHD1O14646 1710 aa19.55■□□□□ 0.72
RDH10-202ENST00000518870 MROH2BQ7Z745 1585 aa19.52■□□□□ 0.71
RDH10-202ENST00000518870 SENP3Q9H4L4 574 aaPredicted RBP19.47■□□□□ 0.71
RDH10-202ENST00000518870 EIF4G3O43432 1585 aaKnown RBP19.42■□□□□ 0.7
RDH10-202ENST00000518870 RSF1Q96T23 1441 aaPredicted RBP19.42■□□□□ 0.7
RDH10-202ENST00000518870 IFT140Q96RY7 1462 aa19.36■□□□□ 0.69
RDH10-202ENST00000518870 CFTRP13569 1480 aa19.32■□□□□ 0.68
RDH10-202ENST00000518870 WIZO95785 1651 aa19.28■□□□□ 0.68
RDH10-202ENST00000518870 FBLN2P98095 1184 aa19.28■□□□□ 0.68
RDH10-202ENST00000518870 CLASP1Q7Z460 1538 aa19.2■□□□□ 0.66
RDH10-202ENST00000518870 AQRO60306 1485 aaKnown RBP eCLIP19.19■□□□□ 0.668e-7■■■■■ 42.6
RDH10-202ENST00000518870 PRDM2Q13029 1718 aa19.17■□□□□ 0.66
RDH10-202ENST00000518870 TOPBP1Q92547 1522 aa19.14■□□□□ 0.65
RDH10-202ENST00000518870 KDM4FA0A1W2PPD8 638 aa19.1■□□□□ 0.65
RDH10-202ENST00000518870 TARBP1Q13395 1621 aaKnown RBP19.08■□□□□ 0.65
RDH10-202ENST00000518870 KIF13AQ9H1H9 1805 aa19.07■□□□□ 0.64
RDH10-202ENST00000518870 GAPVD1Q14C86 1478 aa19.06■□□□□ 0.64
RDH10-202ENST00000518870 SYNJ1O43426 1573 aa19.04■□□□□ 0.64
RDH10-202ENST00000518870 SNAPC4Q5SXM2 1469 aa18.99■□□□□ 0.63
RDH10-202ENST00000518870 DNMBPQ6XZF7 1577 aa18.96■□□□□ 0.63
RDH10-202ENST00000518870 ERCC6L2Q5T890 1561 aa18.91■□□□□ 0.62
RDH10-202ENST00000518870 HECW2Q9P2P5 1572 aa18.89■□□□□ 0.61
RDH10-202ENST00000518870 CHMP7Q8WUX9 453 aaPredicted RBP18.87■□□□□ 0.61
RDH10-202ENST00000518870 ABCC8Q09428 1581 aa18.86■□□□□ 0.61
RDH10-202ENST00000518870 TOP2AP11388 1531 aaKnown RBP18.86■□□□□ 0.61
RDH10-202ENST00000518870 POLA1P09884 1462 aaPredicted RBP18.86■□□□□ 0.61
RDH10-202ENST00000518870 RAD54L2Q9Y4B4 1467 aa18.86■□□□□ 0.61
RDH10-202ENST00000518870 TDRD9Q8NDG6 1382 aaKnown RBP18.86■□□□□ 0.61
RDH10-202ENST00000518870 KDM6BO15054 1643 aa18.82■□□□□ 0.6
RDH10-202ENST00000518870 MAGI1Q96QZ7 1491 aaPredicted RBP18.78■□□□□ 0.6
RDH10-202ENST00000518870 PLPPR3Q6T4P5 718 aa18.76■□□□□ 0.59
RDH10-202ENST00000518870 SYNJ2O15056 1496 aa18.76■□□□□ 0.59
RDH10-202ENST00000518870 FBXO41Q8TF61 875 aa18.75■□□□□ 0.59
RDH10-202ENST00000518870 LMTK3Q96Q04 1460 aa18.72■□□□□ 0.59
RDH10-202ENST00000518870 ADGRL1O94910 1474 aa18.71■□□□□ 0.59
RDH10-202ENST00000518870 SOGA1O94964 1423 aa18.7■□□□□ 0.58
RDH10-202ENST00000518870 WDR97A6NE52 1622 aa18.69■□□□□ 0.58
RDH10-202ENST00000518870 FAM69CQ0P6D2 419 aa18.68■□□□□ 0.58
RDH10-202ENST00000518870 PBRM1Q86U86 1689 aa18.68■□□□□ 0.58
RDH10-202ENST00000518870 TSPOAP1O95153 1857 aa18.68■□□□□ 0.58
RDH10-202ENST00000518870 GRIN2BQ13224 1484 aa18.67■□□□□ 0.58
RDH10-202ENST00000518870 CEP170Q5SW79 1584 aa18.67■□□□□ 0.58
RDH10-202ENST00000518870 DIP2BQ9P265 1576 aa18.66■□□□□ 0.58
RDH10-202ENST00000518870 ABCC10Q5T3U5 1492 aa18.65■□□□□ 0.58
RDH10-202ENST00000518870 CCDC88BA6NC98 1476 aa18.65■□□□□ 0.58
RDH10-202ENST00000518870 FGD5Q6ZNL6 1462 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms