RNA–Protein interactions for RNA: ENST00000518832.1

RUNX1T1-214, Transcript of RUNX1 translocation partner 1, humanhuman

TSL 4

Gene RUNX1T1, Length 591 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1T1-214ENST00000518832 NISCHQ9Y2I1 1504 aa49.54■■■■■ 5.52
RUNX1T1-214ENST00000518832 ABCC9O60706 1549 aa44.54■■■■■ 4.72
RUNX1T1-214ENST00000518832 CCDC180Q9P1Z9 1646 aa44.41■■■■■ 4.7
RUNX1T1-214ENST00000518832 RB1CC1Q8TDY2 1594 aa42.31■■■■■ 4.36
RUNX1T1-214ENST00000518832 NACADO15069 1562 aa42.01■■■■■ 4.32
RUNX1T1-214ENST00000518832 DCAF8L2P0C7V8 631 aa41.98■■■■■ 4.31
RUNX1T1-214ENST00000518832 DNAJC5BQ9UF47 199 aa41.83■■■■■ 4.29
RUNX1T1-214ENST00000518832 PABPN1Q86U42 306 aaKnown RBP eCLIP41.52■■■■■ 4.24
RUNX1T1-214ENST00000518832 UNC13AQ9UPW8 1703 aa41.43■■■■■ 4.22
RUNX1T1-214ENST00000518832 MYO15BQ96JP2 1530 aa41.36■■■■■ 4.21
RUNX1T1-214ENST00000518832 BICRAQ9NZM4 1560 aa41.11■■■■■ 4.17
RUNX1T1-214ENST00000518832 ZCCHC6Q5VYS8 1495 aaKnown RBP41.02■■■■■ 4.16
RUNX1T1-214ENST00000518832 DCAF1Q9Y4B6 1507 aa40.84■■■■■ 4.13
RUNX1T1-214ENST00000518832 SCRIBQ14160 1630 aa40.56■■■■■ 4.08
RUNX1T1-214ENST00000518832 SHROOM4Q9ULL8 1493 aa40.42■■■■■ 4.06
RUNX1T1-214ENST00000518832 CC2D2AQ9P2K1 1620 aa40.21■■■■■ 4.03
RUNX1T1-214ENST00000518832 CECR2Q9BXF3 1484 aa40.09■■■■■ 4.01
RUNX1T1-214ENST00000518832 EIF4G1Q04637 1599 aaKnown RBP40.09■■■■■ 4.01
RUNX1T1-214ENST00000518832 NCAPD3P42695 1498 aa38.79■■■■□ 3.8
RUNX1T1-214ENST00000518832 ATAD2BQ9ULI0 1458 aa38.69■■■■□ 3.78
RUNX1T1-214ENST00000518832 SMARCA4P51532 1647 aa38.65■■■■□ 3.78
RUNX1T1-214ENST00000518832 SMARCA2P51531 1590 aa38.56■■■■□ 3.76
RUNX1T1-214ENST00000518832 HMGXB3Q12766 1538 aa38.47■■■■□ 3.75
RUNX1T1-214ENST00000518832 BAZ1AQ9NRL2 1556 aaPredicted RBP38.44■■■■□ 3.74
RUNX1T1-214ENST00000518832 ERCC6Q03468 1493 aa38.42■■■■□ 3.74
RUNX1T1-214ENST00000518832 DNAJC5Q9H3Z4 198 aa38.37■■■■□ 3.73
RUNX1T1-214ENST00000518832 BAZ1BQ9UIG0 1483 aaKnown RBP38.32■■■■□ 3.72
RUNX1T1-214ENST00000518832 CUX2O14529 1486 aa38.29■■■■□ 3.72
RUNX1T1-214ENST00000518832 NESP48681 1621 aa38.26■■■■□ 3.71
RUNX1T1-214ENST00000518832 PEG3Q9GZU2 1588 aa38.23■■■■□ 3.71
RUNX1T1-214ENST00000518832 MROH2BQ7Z745 1585 aa38.2■■■■□ 3.71
RUNX1T1-214ENST00000518832 LAMC3Q9Y6N6 1575 aa37.91■■■■□ 3.66
RUNX1T1-214ENST00000518832 THOC2Q8NI27 1593 aaKnown RBP37.81■■■■□ 3.64
RUNX1T1-214ENST00000518832 WIZO95785 1651 aa37.78■■■■□ 3.64
RUNX1T1-214ENST00000518832 KIF21AQ7Z4S6 1674 aa37.76■■■■□ 3.63
RUNX1T1-214ENST00000518832 PDS5BQ9NTI5 1447 aa37.71■■■■□ 3.63
RUNX1T1-214ENST00000518832 CADPSQ9ULU8 1353 aa37.63■■■■□ 3.61
RUNX1T1-214ENST00000518832 RSF1Q96T23 1441 aaPredicted RBP37.39■■■■□ 3.58
RUNX1T1-214ENST00000518832 MRC2Q9UBG0 1479 aa37.39■■■■□ 3.58
RUNX1T1-214ENST00000518832 WDR62O43379 1518 aa37.28■■■■□ 3.56
RUNX1T1-214ENST00000518832 CEP164Q9UPV0 1460 aa37.24■■■■□ 3.55
RUNX1T1-214ENST00000518832 TOP2AP11388 1531 aaKnown RBP37.22■■■■□ 3.55
RUNX1T1-214ENST00000518832 FANCD2Q9BXW9 1451 aa37.21■■■■□ 3.55
RUNX1T1-214ENST00000518832 CFTRP13569 1480 aa37.19■■■■□ 3.54
RUNX1T1-214ENST00000518832 URB2Q14146 1524 aaKnown RBP36.91■■■■□ 3.5
RUNX1T1-214ENST00000518832 CCDC88BA6NC98 1476 aa36.86■■■■□ 3.49
RUNX1T1-214ENST00000518832 PRDM2Q13029 1718 aa36.82■■■■□ 3.49
RUNX1T1-214ENST00000518832 TRIM41Q8WV44 630 aa36.76■■■■□ 3.48
RUNX1T1-214ENST00000518832 OSCARQ8IYS5 282 aa36.63■■■■□ 3.45
RUNX1T1-214ENST00000518832 TOPBP1Q92547 1522 aa36.5■■■■□ 3.43
RUNX1T1-214ENST00000518832 ZNF608Q9ULD9 1512 aaPredicted RBP36.49■■■■□ 3.43
RUNX1T1-214ENST00000518832 IFT140Q96RY7 1462 aa36.48■■■■□ 3.43
RUNX1T1-214ENST00000518832 ABCC8Q09428 1581 aa36.38■■■■□ 3.41
RUNX1T1-214ENST00000518832 DNMBPQ6XZF7 1577 aa36.35■■■■□ 3.41
RUNX1T1-214ENST00000518832 EIF4G3O43432 1585 aaKnown RBP36.24■■■■□ 3.39
RUNX1T1-214ENST00000518832 TARBP1Q13395 1621 aaKnown RBP36.18■■■■□ 3.38
RUNX1T1-214ENST00000518832 AQRO60306 1485 aaKnown RBP eCLIP36.17■■■■□ 3.38
RUNX1T1-214ENST00000518832 RIMBP3CA6NJZ7 1639 aa36.14■■■■□ 3.38
RUNX1T1-214ENST00000518832 RIMBP3BA6NNM3 1639 aa36.14■■■■□ 3.38
RUNX1T1-214ENST00000518832 RIMBP3Q9UFD9 1639 aa36.14■■■■□ 3.38
RUNX1T1-214ENST00000518832 POLA1P09884 1462 aaPredicted RBP36.13■■■■□ 3.37
RUNX1T1-214ENST00000518832 RAD54L2Q9Y4B4 1467 aa36.05■■■■□ 3.36
RUNX1T1-214ENST00000518832 CHD1O14646 1710 aa36.03■■■■□ 3.36
RUNX1T1-214ENST00000518832 ARHGEF11O15085 1522 aa36.01■■■■□ 3.36
RUNX1T1-214ENST00000518832 SOGA1O94964 1423 aa36■■■■□ 3.35
RUNX1T1-214ENST00000518832 FBLN2P98095 1184 aa35.99■■■■□ 3.35
RUNX1T1-214ENST00000518832 TDRD9Q8NDG6 1382 aaKnown RBP35.95■■■■□ 3.35
RUNX1T1-214ENST00000518832 FGD5Q6ZNL6 1462 aa35.92■■■■□ 3.34
RUNX1T1-214ENST00000518832 CUX1P39880 1505 aa35.88■■■■□ 3.33
RUNX1T1-214ENST00000518832 SUPT5HO00267 1087 aaKnown RBP35.85■■■■□ 3.33
RUNX1T1-214ENST00000518832 CYB5RLQ6IPT4 315 aa35.83■■■■□ 3.33
RUNX1T1-214ENST00000518832 SNAPC4Q5SXM2 1469 aa35.76■■■■□ 3.32
RUNX1T1-214ENST00000518832 WDR97A6NE52 1622 aa35.73■■■■□ 3.31
RUNX1T1-214ENST00000518832 CHMP7Q8WUX9 453 aaPredicted RBP35.67■■■■□ 3.3
RUNX1T1-214ENST00000518832 ARAP1Q96P48 1450 aa35.65■■■■□ 3.3
RUNX1T1-214ENST00000518832 GRIN2BQ13224 1484 aa35.64■■■■□ 3.3
RUNX1T1-214ENST00000518832 MAGI1Q96QZ7 1491 aaPredicted RBP35.62■■■■□ 3.29
RUNX1T1-214ENST00000518832 CLASP1Q7Z460 1538 aa35.55■■■■□ 3.28
RUNX1T1-214ENST00000518832 GAPVD1Q14C86 1478 aa35.54■■■■□ 3.28
RUNX1T1-214ENST00000518832 PBRM1Q86U86 1689 aa35.53■■■■□ 3.28
RUNX1T1-214ENST00000518832 SYNJ1O43426 1573 aa35.53■■■■□ 3.28
RUNX1T1-214ENST00000518832 SYNJ2O15056 1496 aa35.53■■■■□ 3.28
RUNX1T1-214ENST00000518832 ABCA10Q8WWZ4 1543 aa35.47■■■■□ 3.27
RUNX1T1-214ENST00000518832 TRHP20396 242 aaPredicted RBP35.44■■■■□ 3.26
RUNX1T1-214ENST00000518832 ABCA5Q8WWZ7 1642 aa35.43■■■■□ 3.26
RUNX1T1-214ENST00000518832 WRNQ14191 1432 aaPredicted RBP eCLIP35.34■■■■□ 3.25
RUNX1T1-214ENST00000518832 TOP2BQ02880 1626 aa35.28■■■■□ 3.24
RUNX1T1-214ENST00000518832 BIVM-ERCC5R4GMW8 1640 aa35.28■■■■□ 3.24
RUNX1T1-214ENST00000518832 GRIN2AQ12879 1464 aa35.19■■■■□ 3.22
RUNX1T1-214ENST00000518832 ADAMTS12P58397 1594 aa35.16■■■■□ 3.22
RUNX1T1-214ENST00000518832 CEP170Q5SW79 1584 aa35.08■■■■□ 3.21
RUNX1T1-214ENST00000518832 ERCC6L2Q5T890 1561 aa35.07■■■■□ 3.2
RUNX1T1-214ENST00000518832 FHAD1B1AJZ9 1412 aa35.06■■■■□ 3.2
RUNX1T1-214ENST00000518832 NUP160Q12769 1436 aa35.06■■■■□ 3.2
RUNX1T1-214ENST00000518832 ERICH3Q5RHP9 1530 aa35.02■■■■□ 3.2
RUNX1T1-214ENST00000518832 SHROOM2Q13796 1616 aa34.91■■■■□ 3.18
RUNX1T1-214ENST00000518832 JPH4Q96JJ6 628 aa34.77■■■■□ 3.16
RUNX1T1-214ENST00000518832 PRG4Q92954 1404 aaPredicted RBP34.77■■■■□ 3.16
RUNX1T1-214ENST00000518832 RUSC2Q8N2Y8 1516 aa34.66■■■■□ 3.14
RUNX1T1-214ENST00000518832 IGF1RP08069 1367 aa34.62■■■■□ 3.13
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms