RNA–Protein interactions for RNA: ENST00000518692.1

SPIDR-207, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 5

Gene SPIDR, Length 726 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-207ENST00000518692 NISCHQ9Y2I1 1504 aa43.65■■■■■ 4.58
SPIDR-207ENST00000518692 CCDC180Q9P1Z9 1646 aa39.03■■■■□ 3.84
SPIDR-207ENST00000518692 ABCC9O60706 1549 aa38.87■■■■□ 3.81
SPIDR-207ENST00000518692 RB1CC1Q8TDY2 1594 aa37.04■■■■□ 3.52
SPIDR-207ENST00000518692 NACADO15069 1562 aa36.84■■■■□ 3.49
SPIDR-207ENST00000518692 DCAF8L2P0C7V8 631 aa36.72■■■■□ 3.47
SPIDR-207ENST00000518692 MYO15BQ96JP2 1530 aa36.4■■■■□ 3.42
SPIDR-207ENST00000518692 DNAJC5BQ9UF47 199 aa36.32■■■■□ 3.4
SPIDR-207ENST00000518692 UNC13AQ9UPW8 1703 aa36.29■■■■□ 3.4
SPIDR-207ENST00000518692 PABPN1Q86U42 306 aaKnown RBP eCLIP36.24■■■■□ 3.39
SPIDR-207ENST00000518692 ZCCHC6Q5VYS8 1495 aaKnown RBP36.23■■■■□ 3.39
SPIDR-207ENST00000518692 DCAF1Q9Y4B6 1507 aa36.03■■■■□ 3.36
SPIDR-207ENST00000518692 BICRAQ9NZM4 1560 aa36.03■■■■□ 3.36
SPIDR-207ENST00000518692 SCRIBQ14160 1630 aa35.63■■■■□ 3.29
SPIDR-207ENST00000518692 SHROOM4Q9ULL8 1493 aa35.45■■■■□ 3.27
SPIDR-207ENST00000518692 CC2D2AQ9P2K1 1620 aa35.12■■■■□ 3.21
SPIDR-207ENST00000518692 EIF4G1Q04637 1599 aaKnown RBP35.09■■■■□ 3.21
SPIDR-207ENST00000518692 CECR2Q9BXF3 1484 aa34.96■■■■□ 3.19
SPIDR-207ENST00000518692 NCAPD3P42695 1498 aa34.03■■■■□ 3.04
SPIDR-207ENST00000518692 SMARCA4P51532 1647 aa34.01■■■■□ 3.03
SPIDR-207ENST00000518692 ATAD2BQ9ULI0 1458 aa33.98■■■■□ 3.03
SPIDR-207ENST00000518692 SMARCA2P51531 1590 aa33.85■■■■□ 3.01
SPIDR-207ENST00000518692 BAZ1AQ9NRL2 1556 aaPredicted RBP33.83■■■■□ 3.01
SPIDR-207ENST00000518692 HMGXB3Q12766 1538 aa33.79■■■■□ 3
SPIDR-207ENST00000518692 MROH2BQ7Z745 1585 aa33.67■■■□□ 2.98
SPIDR-207ENST00000518692 PEG3Q9GZU2 1588 aa33.66■■■□□ 2.98
SPIDR-207ENST00000518692 BAZ1BQ9UIG0 1483 aaKnown RBP33.63■■■□□ 2.97
SPIDR-207ENST00000518692 NESP48681 1621 aa33.48■■■□□ 2.95
SPIDR-207ENST00000518692 ERCC6Q03468 1493 aa33.48■■■□□ 2.95
SPIDR-207ENST00000518692 CUX2O14529 1486 aa33.34■■■□□ 2.93
SPIDR-207ENST00000518692 WIZO95785 1651 aa33.28■■■□□ 2.92
SPIDR-207ENST00000518692 LAMC3Q9Y6N6 1575 aa33.21■■■□□ 2.91
SPIDR-207ENST00000518692 DNAJC5Q9H3Z4 198 aa33.1■■■□□ 2.89
SPIDR-207ENST00000518692 THOC2Q8NI27 1593 aaKnown RBP33.08■■■□□ 2.89
SPIDR-207ENST00000518692 KIF21AQ7Z4S6 1674 aa33.04■■■□□ 2.88
SPIDR-207ENST00000518692 RSF1Q96T23 1441 aaPredicted RBP33.04■■■□□ 2.88
SPIDR-207ENST00000518692 CADPSQ9ULU8 1353 aa33■■■□□ 2.87
SPIDR-207ENST00000518692 PDS5BQ9NTI5 1447 aa32.99■■■□□ 2.87
SPIDR-207ENST00000518692 TOP2AP11388 1531 aaKnown RBP32.83■■■□□ 2.85
SPIDR-207ENST00000518692 MRC2Q9UBG0 1479 aa32.73■■■□□ 2.83
SPIDR-207ENST00000518692 CFTRP13569 1480 aa32.69■■■□□ 2.82
SPIDR-207ENST00000518692 WDR62O43379 1518 aa32.65■■■□□ 2.82
SPIDR-207ENST00000518692 FANCD2Q9BXW9 1451 aa32.64■■■□□ 2.82
SPIDR-207ENST00000518692 CEP164Q9UPV0 1460 aa32.63■■■□□ 2.81
SPIDR-207ENST00000518692 CCDC88BA6NC98 1476 aa32.48■■■□□ 2.79
SPIDR-207ENST00000518692 URB2Q14146 1524 aaKnown RBP32.39■■■□□ 2.78
SPIDR-207ENST00000518692 PRDM2Q13029 1718 aa32.37■■■□□ 2.77
SPIDR-207ENST00000518692 TOPBP1Q92547 1522 aa32.06■■■□□ 2.72
SPIDR-207ENST00000518692 IFT140Q96RY7 1462 aa31.97■■■□□ 2.71
SPIDR-207ENST00000518692 ZNF608Q9ULD9 1512 aaPredicted RBP31.96■■■□□ 2.71
SPIDR-207ENST00000518692 DNMBPQ6XZF7 1577 aa31.94■■■□□ 2.7
SPIDR-207ENST00000518692 ABCC8Q09428 1581 aa31.94■■■□□ 2.7
SPIDR-207ENST00000518692 OSCARQ8IYS5 282 aa31.86■■■□□ 2.69
SPIDR-207ENST00000518692 TARBP1Q13395 1621 aaKnown RBP31.77■■■□□ 2.68
SPIDR-207ENST00000518692 EIF4G3O43432 1585 aaKnown RBP31.77■■■□□ 2.68
SPIDR-207ENST00000518692 TRIM41Q8WV44 630 aa31.75■■■□□ 2.67
SPIDR-207ENST00000518692 POLA1P09884 1462 aaPredicted RBP31.75■■■□□ 2.67
SPIDR-207ENST00000518692 SUPT5HO00267 1087 aaKnown RBP31.73■■■□□ 2.67
SPIDR-207ENST00000518692 AQRO60306 1485 aaKnown RBP eCLIP31.68■■■□□ 2.66
SPIDR-207ENST00000518692 RAD54L2Q9Y4B4 1467 aa31.65■■■□□ 2.66
SPIDR-207ENST00000518692 CUX1P39880 1505 aa31.61■■■□□ 2.65
SPIDR-207ENST00000518692 FGD5Q6ZNL6 1462 aa31.59■■■□□ 2.65
SPIDR-207ENST00000518692 SOGA1O94964 1423 aa31.58■■■□□ 2.65
SPIDR-207ENST00000518692 TDRD9Q8NDG6 1382 aaKnown RBP31.52■■■□□ 2.64
SPIDR-207ENST00000518692 CHD1O14646 1710 aa31.5■■■□□ 2.63
SPIDR-207ENST00000518692 RIMBP3CA6NJZ7 1639 aa31.47■■■□□ 2.63
SPIDR-207ENST00000518692 RIMBP3BA6NNM3 1639 aa31.47■■■□□ 2.63
SPIDR-207ENST00000518692 RIMBP3Q9UFD9 1639 aa31.47■■■□□ 2.63
SPIDR-207ENST00000518692 ARHGEF11O15085 1522 aa31.39■■■□□ 2.61
SPIDR-207ENST00000518692 WDR97A6NE52 1622 aa31.38■■■□□ 2.61
SPIDR-207ENST00000518692 FBLN2P98095 1184 aa31.38■■■□□ 2.61
SPIDR-207ENST00000518692 SNAPC4Q5SXM2 1469 aa31.35■■■□□ 2.61
SPIDR-207ENST00000518692 GRIN2BQ13224 1484 aa31.27■■■□□ 2.6
SPIDR-207ENST00000518692 MAGI1Q96QZ7 1491 aaPredicted RBP31.24■■■□□ 2.59
SPIDR-207ENST00000518692 ABCA10Q8WWZ4 1543 aa31.22■■■□□ 2.59
SPIDR-207ENST00000518692 GAPVD1Q14C86 1478 aa31.21■■■□□ 2.59
SPIDR-207ENST00000518692 PBRM1Q86U86 1689 aa31.2■■■□□ 2.59
SPIDR-207ENST00000518692 CHMP7Q8WUX9 453 aaPredicted RBP31.18■■■□□ 2.58
SPIDR-207ENST00000518692 ABCA5Q8WWZ7 1642 aa31.17■■■□□ 2.58
SPIDR-207ENST00000518692 SYNJ2O15056 1496 aa31.14■■■□□ 2.58
SPIDR-207ENST00000518692 CLASP1Q7Z460 1538 aa31.14■■■□□ 2.58
SPIDR-207ENST00000518692 SYNJ1O43426 1573 aa31.14■■■□□ 2.58
SPIDR-207ENST00000518692 BIVM-ERCC5R4GMW8 1640 aa31.14■■■□□ 2.58
SPIDR-207ENST00000518692 TOP2BQ02880 1626 aa31.13■■■□□ 2.57
SPIDR-207ENST00000518692 CYB5RLQ6IPT4 315 aa31.13■■■□□ 2.57
SPIDR-207ENST00000518692 WRNQ14191 1432 aaPredicted RBP eCLIP31.13■■■□□ 2.57
SPIDR-207ENST00000518692 ARAP1Q96P48 1450 aa31.12■■■□□ 2.57
SPIDR-207ENST00000518692 ADAMTS12P58397 1594 aa30.92■■■□□ 2.54
SPIDR-207ENST00000518692 GRIN2AQ12879 1464 aa30.89■■■□□ 2.53
SPIDR-207ENST00000518692 ERICH3Q5RHP9 1530 aa30.82■■■□□ 2.52
SPIDR-207ENST00000518692 FHAD1B1AJZ9 1412 aa30.81■■■□□ 2.52
SPIDR-207ENST00000518692 CEP170Q5SW79 1584 aa30.8■■■□□ 2.52
SPIDR-207ENST00000518692 NUP160Q12769 1436 aa30.79■■■□□ 2.52
SPIDR-207ENST00000518692 ERCC6L2Q5T890 1561 aa30.72■■■□□ 2.51
SPIDR-207ENST00000518692 TRHP20396 242 aaPredicted RBP30.68■■■□□ 2.5
SPIDR-207ENST00000518692 SHROOM2Q13796 1616 aa30.63■■■□□ 2.49
SPIDR-207ENST00000518692 IGF1RP08069 1367 aa30.52■■■□□ 2.48
SPIDR-207ENST00000518692 KIF27Q86VH2 1401 aa30.5■■■□□ 2.47
SPIDR-207ENST00000518692 RUSC2Q8N2Y8 1516 aa30.47■■■□□ 2.47
SPIDR-207ENST00000518692 JPH4Q96JJ6 628 aa30.46■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms