RNA–Protein interactions for RNA: ENST00000518691.1

ARFGAP1-208, Transcript of ADP ribosylation factor GTPase activating protein 1, humanhuman

TSL 2

Gene ARFGAP1, Length 1,162 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGAP1-208ENST00000518691 NISCHQ9Y2I1 1504 aa48.08■■■■■ 5.29
ARFGAP1-208ENST00000518691 CCDC180Q9P1Z9 1646 aa43.03■■■■■ 4.48
ARFGAP1-208ENST00000518691 ABCC9O60706 1549 aa42.61■■■■■ 4.41
ARFGAP1-208ENST00000518691 RB1CC1Q8TDY2 1594 aa40.76■■■■■ 4.12
ARFGAP1-208ENST00000518691 NACADO15069 1562 aa40.59■■■■■ 4.09
ARFGAP1-208ENST00000518691 DCAF8L2P0C7V8 631 aa40.26■■■■■ 4.04
ARFGAP1-208ENST00000518691 MYO15BQ96JP2 1530 aa40.21■■■■■ 4.03
ARFGAP1-208ENST00000518691 ZCCHC6Q5VYS8 1495 aaKnown RBP39.92■■■■□ 3.98
ARFGAP1-208ENST00000518691 UNC13AQ9UPW8 1703 aa39.87■■■■□ 3.97
ARFGAP1-208ENST00000518691 DCAF1Q9Y4B6 1507 aa39.8■■■■□ 3.96
ARFGAP1-208ENST00000518691 DNAJC5BQ9UF47 199 aa39.76■■■■□ 3.96
ARFGAP1-208ENST00000518691 PABPN1Q86U42 306 aaKnown RBP eCLIP39.7■■■■□ 3.95
ARFGAP1-208ENST00000518691 BICRAQ9NZM4 1560 aa39.61■■■■□ 3.93
ARFGAP1-208ENST00000518691 SHROOM4Q9ULL8 1493 aa39.14■■■■□ 3.86
ARFGAP1-208ENST00000518691 SCRIBQ14160 1630 aa39.12■■■■□ 3.85
ARFGAP1-208ENST00000518691 EIF4G1Q04637 1599 aaKnown RBP38.57■■■■□ 3.76
ARFGAP1-208ENST00000518691 CC2D2AQ9P2K1 1620 aa38.56■■■■□ 3.76
ARFGAP1-208ENST00000518691 CECR2Q9BXF3 1484 aa38.38■■■■□ 3.73
ARFGAP1-208ENST00000518691 NCAPD3P42695 1498 aa37.49■■■■□ 3.59
ARFGAP1-208ENST00000518691 SMARCA4P51532 1647 aa37.42■■■■□ 3.58
ARFGAP1-208ENST00000518691 ATAD2BQ9ULI0 1458 aa37.39■■■■□ 3.58
ARFGAP1-208ENST00000518691 SMARCA2P51531 1590 aa37.29■■■■□ 3.56
ARFGAP1-208ENST00000518691 BAZ1AQ9NRL2 1556 aaPredicted RBP37.29■■■■□ 3.56
ARFGAP1-208ENST00000518691 HMGXB3Q12766 1538 aa37.22■■■■□ 3.55
ARFGAP1-208ENST00000518691 PEG3Q9GZU2 1588 aa37.12■■■■□ 3.53
ARFGAP1-208ENST00000518691 MROH2BQ7Z745 1585 aa37.03■■■■□ 3.52
ARFGAP1-208ENST00000518691 BAZ1BQ9UIG0 1483 aaKnown RBP37■■■■□ 3.51
ARFGAP1-208ENST00000518691 ERCC6Q03468 1493 aa36.74■■■■□ 3.47
ARFGAP1-208ENST00000518691 NESP48681 1621 aa36.72■■■■□ 3.47
ARFGAP1-208ENST00000518691 CUX2O14529 1486 aa36.66■■■■□ 3.46
ARFGAP1-208ENST00000518691 WIZO95785 1651 aa36.58■■■■□ 3.45
ARFGAP1-208ENST00000518691 LAMC3Q9Y6N6 1575 aa36.57■■■■□ 3.44
ARFGAP1-208ENST00000518691 RSF1Q96T23 1441 aaPredicted RBP36.39■■■■□ 3.42
ARFGAP1-208ENST00000518691 CADPSQ9ULU8 1353 aa36.33■■■■□ 3.41
ARFGAP1-208ENST00000518691 THOC2Q8NI27 1593 aaKnown RBP36.32■■■■□ 3.41
ARFGAP1-208ENST00000518691 PDS5BQ9NTI5 1447 aa36.32■■■■□ 3.4
ARFGAP1-208ENST00000518691 DNAJC5Q9H3Z4 198 aa36.29■■■■□ 3.4
ARFGAP1-208ENST00000518691 KIF21AQ7Z4S6 1674 aa36.27■■■■□ 3.4
ARFGAP1-208ENST00000518691 TOP2AP11388 1531 aaKnown RBP36.16■■■■□ 3.38
ARFGAP1-208ENST00000518691 CFTRP13569 1480 aa36■■■■□ 3.35
ARFGAP1-208ENST00000518691 MRC2Q9UBG0 1479 aa35.98■■■■□ 3.35
ARFGAP1-208ENST00000518691 WDR62O43379 1518 aa35.91■■■■□ 3.34
ARFGAP1-208ENST00000518691 FANCD2Q9BXW9 1451 aa35.88■■■■□ 3.33
ARFGAP1-208ENST00000518691 CEP164Q9UPV0 1460 aa35.88■■■■□ 3.33
ARFGAP1-208ENST00000518691 CCDC88BA6NC98 1476 aa35.75■■■■□ 3.31
ARFGAP1-208ENST00000518691 PRDM2Q13029 1718 aa35.66■■■■□ 3.3
ARFGAP1-208ENST00000518691 URB2Q14146 1524 aaKnown RBP35.59■■■■□ 3.29
ARFGAP1-208ENST00000518691 TOPBP1Q92547 1522 aa35.26■■■■□ 3.23
ARFGAP1-208ENST00000518691 ABCC8Q09428 1581 aa35.23■■■■□ 3.23
ARFGAP1-208ENST00000518691 IFT140Q96RY7 1462 aa35.18■■■■□ 3.22
ARFGAP1-208ENST00000518691 DNMBPQ6XZF7 1577 aa35.16■■■■□ 3.22
ARFGAP1-208ENST00000518691 ZNF608Q9ULD9 1512 aaPredicted RBP35.08■■■■□ 3.21
ARFGAP1-208ENST00000518691 OSCARQ8IYS5 282 aa35.01■■■■□ 3.2
ARFGAP1-208ENST00000518691 TARBP1Q13395 1621 aaKnown RBP34.95■■■■□ 3.19
ARFGAP1-208ENST00000518691 POLA1P09884 1462 aaPredicted RBP34.92■■■■□ 3.18
ARFGAP1-208ENST00000518691 EIF4G3O43432 1585 aaKnown RBP34.91■■■■□ 3.18
ARFGAP1-208ENST00000518691 SUPT5HO00267 1087 aaKnown RBP34.88■■■■□ 3.17
ARFGAP1-208ENST00000518691 AQRO60306 1485 aaKnown RBP eCLIP34.79■■■■□ 3.162e-9■■□□□ 13.9
ARFGAP1-208ENST00000518691 CUX1P39880 1505 aa34.76■■■■□ 3.16
ARFGAP1-208ENST00000518691 RAD54L2Q9Y4B4 1467 aa34.76■■■■□ 3.15
ARFGAP1-208ENST00000518691 SOGA1O94964 1423 aa34.75■■■■□ 3.15
ARFGAP1-208ENST00000518691 FGD5Q6ZNL6 1462 aa34.72■■■■□ 3.15
ARFGAP1-208ENST00000518691 TRIM41Q8WV44 630 aa34.67■■■■□ 3.14
ARFGAP1-208ENST00000518691 WDR97A6NE52 1622 aa34.64■■■■□ 3.14
ARFGAP1-208ENST00000518691 TDRD9Q8NDG6 1382 aaKnown RBP34.62■■■■□ 3.13
ARFGAP1-208ENST00000518691 CHD1O14646 1710 aa34.58■■■■□ 3.13
ARFGAP1-208ENST00000518691 RIMBP3CA6NJZ7 1639 aa34.52■■■■□ 3.12
ARFGAP1-208ENST00000518691 RIMBP3BA6NNM3 1639 aa34.52■■■■□ 3.12
ARFGAP1-208ENST00000518691 RIMBP3Q9UFD9 1639 aa34.52■■■■□ 3.12
ARFGAP1-208ENST00000518691 ARHGEF11O15085 1522 aa34.45■■■■□ 3.11
ARFGAP1-208ENST00000518691 SNAPC4Q5SXM2 1469 aa34.44■■■■□ 3.1
ARFGAP1-208ENST00000518691 GRIN2BQ13224 1484 aa34.43■■■■□ 3.1
ARFGAP1-208ENST00000518691 MAGI1Q96QZ7 1491 aaPredicted RBP34.41■■■■□ 3.1
ARFGAP1-208ENST00000518691 FBLN2P98095 1184 aa34.41■■■■□ 3.1
ARFGAP1-208ENST00000518691 ABCA10Q8WWZ4 1543 aa34.4■■■■□ 3.1
ARFGAP1-208ENST00000518691 GAPVD1Q14C86 1478 aa34.33■■■■□ 3.09
ARFGAP1-208ENST00000518691 TOP2BQ02880 1626 aa34.32■■■■□ 3.08
ARFGAP1-208ENST00000518691 BIVM-ERCC5R4GMW8 1640 aa34.32■■■■□ 3.08
ARFGAP1-208ENST00000518691 ABCA5Q8WWZ7 1642 aa34.31■■■■□ 3.08
ARFGAP1-208ENST00000518691 PBRM1Q86U86 1689 aa34.29■■■■□ 3.08
ARFGAP1-208ENST00000518691 WRNQ14191 1432 aaPredicted RBP eCLIP34.29■■■■□ 3.08
ARFGAP1-208ENST00000518691 SYNJ2O15056 1496 aa34.28■■■■□ 3.08
ARFGAP1-208ENST00000518691 CHMP7Q8WUX9 453 aaPredicted RBP34.27■■■■□ 3.08
ARFGAP1-208ENST00000518691 SYNJ1O43426 1573 aa34.25■■■■□ 3.07
ARFGAP1-208ENST00000518691 CLASP1Q7Z460 1538 aa34.24■■■■□ 3.07
ARFGAP1-208ENST00000518691 ARAP1Q96P48 1450 aa34.14■■■■□ 3.06
ARFGAP1-208ENST00000518691 CYB5RLQ6IPT4 315 aa34.12■■■■□ 3.05
ARFGAP1-208ENST00000518691 ADAMTS12P58397 1594 aa34■■■■□ 3.03
ARFGAP1-208ENST00000518691 GRIN2AQ12879 1464 aa33.98■■■■□ 3.03
ARFGAP1-208ENST00000518691 ERICH3Q5RHP9 1530 aa33.97■■■■□ 3.03
ARFGAP1-208ENST00000518691 FHAD1B1AJZ9 1412 aa33.93■■■■□ 3.02
ARFGAP1-208ENST00000518691 NUP160Q12769 1436 aa33.88■■■■□ 3.01
ARFGAP1-208ENST00000518691 CEP170Q5SW79 1584 aa33.85■■■■□ 3.01
ARFGAP1-208ENST00000518691 SHROOM2Q13796 1616 aa33.72■■■□□ 2.99
ARFGAP1-208ENST00000518691 ERCC6L2Q5T890 1561 aa33.69■■■□□ 2.98
ARFGAP1-208ENST00000518691 KIF27Q86VH2 1401 aa33.62■■■□□ 2.97
ARFGAP1-208ENST00000518691 IGF1RP08069 1367 aa33.61■■■□□ 2.97
ARFGAP1-208ENST00000518691 TRHP20396 242 aaPredicted RBP33.58■■■□□ 2.97
ARFGAP1-208ENST00000518691 RUSC2Q8N2Y8 1516 aa33.52■■■□□ 2.96
ARFGAP1-208ENST00000518691 CUL7Q14999 1698 aa33.52■■■□□ 2.96
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms