RNA–Protein interactions for RNA: ENST00000518597.1

RBM12B-203, Transcript of RNA binding motif protein 12B, humanhuman

TSL 2

Gene RBM12B, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM12B-203ENST00000518597 NISCHQ9Y2I1 1504 aa29.25■■■□□ 2.27
RBM12B-203ENST00000518597 CCDC180Q9P1Z9 1646 aa26.1■■□□□ 1.77
RBM12B-203ENST00000518597 ABCC9O60706 1549 aa25.68■■□□□ 1.7
RBM12B-203ENST00000518597 RB1CC1Q8TDY2 1594 aa24.61■■□□□ 1.53
RBM12B-203ENST00000518597 NACADO15069 1562 aa24.55■■□□□ 1.52
RBM12B-203ENST00000518597 MYO15BQ96JP2 1530 aa24.37■■□□□ 1.49
RBM12B-203ENST00000518597 ZCCHC6Q5VYS8 1495 aaKnown RBP24.32■■□□□ 1.48
RBM12B-203ENST00000518597 DCAF8L2P0C7V8 631 aa24.32■■□□□ 1.48
RBM12B-203ENST00000518597 UNC13AQ9UPW8 1703 aa24.23■■□□□ 1.47
RBM12B-203ENST00000518597 DCAF1Q9Y4B6 1507 aa24.2■■□□□ 1.47
RBM12B-203ENST00000518597 BICRAQ9NZM4 1560 aa24.01■■□□□ 1.43
RBM12B-203ENST00000518597 PABPN1Q86U42 306 aaKnown RBP eCLIP23.94■■□□□ 1.42
RBM12B-203ENST00000518597 DNAJC5BQ9UF47 199 aa23.87■■□□□ 1.41
RBM12B-203ENST00000518597 SCRIBQ14160 1630 aa23.77■■□□□ 1.4
RBM12B-203ENST00000518597 SHROOM4Q9ULL8 1493 aa23.61■■□□□ 1.37
RBM12B-203ENST00000518597 EIF4G1Q04637 1599 aaKnown RBP23.31■■□□□ 1.32
RBM12B-203ENST00000518597 CC2D2AQ9P2K1 1620 aa23.27■■□□□ 1.32
RBM12B-203ENST00000518597 CECR2Q9BXF3 1484 aa23.09■■□□□ 1.29
RBM12B-203ENST00000518597 SMARCA4P51532 1647 aa22.75■■□□□ 1.23
RBM12B-203ENST00000518597 NCAPD3P42695 1498 aa22.67■■□□□ 1.22
RBM12B-203ENST00000518597 ATAD2BQ9ULI0 1458 aa22.66■■□□□ 1.22
RBM12B-203ENST00000518597 BAZ1AQ9NRL2 1556 aaPredicted RBP22.63■■□□□ 1.21
RBM12B-203ENST00000518597 SMARCA2P51531 1590 aa22.57■■□□□ 1.2
RBM12B-203ENST00000518597 MROH2BQ7Z745 1585 aa22.56■■□□□ 1.2
RBM12B-203ENST00000518597 PEG3Q9GZU2 1588 aa22.55■■□□□ 1.2
RBM12B-203ENST00000518597 HMGXB3Q12766 1538 aa22.54■■□□□ 1.2
RBM12B-203ENST00000518597 BAZ1BQ9UIG0 1483 aaKnown RBP22.39■■□□□ 1.17
RBM12B-203ENST00000518597 WIZO95785 1651 aa22.31■■□□□ 1.16
RBM12B-203ENST00000518597 NESP48681 1621 aa22.22■■□□□ 1.15
RBM12B-203ENST00000518597 RSF1Q96T23 1441 aaPredicted RBP22.2■■□□□ 1.14
RBM12B-203ENST00000518597 LAMC3Q9Y6N6 1575 aa22.09■■□□□ 1.13
RBM12B-203ENST00000518597 ERCC6Q03468 1493 aa22.06■■□□□ 1.12
RBM12B-203ENST00000518597 TOP2AP11388 1531 aaKnown RBP22.01■■□□□ 1.11
RBM12B-203ENST00000518597 KIF21AQ7Z4S6 1674 aa21.98■■□□□ 1.11
RBM12B-203ENST00000518597 CUX2O14529 1486 aa21.97■■□□□ 1.11
RBM12B-203ENST00000518597 CADPSQ9ULU8 1353 aa21.97■■□□□ 1.11
RBM12B-203ENST00000518597 THOC2Q8NI27 1593 aaKnown RBP21.95■■□□□ 1.11
RBM12B-203ENST00000518597 PDS5BQ9NTI5 1447 aa21.89■■□□□ 1.09
RBM12B-203ENST00000518597 CFTRP13569 1480 aa21.83■■□□□ 1.08
RBM12B-203ENST00000518597 CCDC88BA6NC98 1476 aa21.77■■□□□ 1.08
RBM12B-203ENST00000518597 FANCD2Q9BXW9 1451 aa21.71■■□□□ 1.07
RBM12B-203ENST00000518597 MRC2Q9UBG0 1479 aa21.71■■□□□ 1.07
RBM12B-203ENST00000518597 PRDM2Q13029 1718 aa21.71■■□□□ 1.07
RBM12B-203ENST00000518597 WDR62O43379 1518 aa21.69■■□□□ 1.06
RBM12B-203ENST00000518597 CEP164Q9UPV0 1460 aa21.68■■□□□ 1.06
RBM12B-203ENST00000518597 URB2Q14146 1524 aaKnown RBP21.58■■□□□ 1.04
RBM12B-203ENST00000518597 DNAJC5Q9H3Z4 198 aa21.57■■□□□ 1.04
RBM12B-203ENST00000518597 TOPBP1Q92547 1522 aa21.38■■□□□ 1.01
RBM12B-203ENST00000518597 SUPT5HO00267 1087 aaKnown RBP21.35■■□□□ 1.01
RBM12B-203ENST00000518597 DNMBPQ6XZF7 1577 aa21.32■■□□□ 1
RBM12B-203ENST00000518597 ABCC8Q09428 1581 aa21.29■■□□□ 1
RBM12B-203ENST00000518597 IFT140Q96RY7 1462 aa21.24■□□□□ 0.99
RBM12B-203ENST00000518597 ZNF608Q9ULD9 1512 aaPredicted RBP21.24■□□□□ 0.99
RBM12B-203ENST00000518597 TARBP1Q13395 1621 aaKnown RBP21.22■□□□□ 0.99
RBM12B-203ENST00000518597 POLA1P09884 1462 aaPredicted RBP21.19■□□□□ 0.98
RBM12B-203ENST00000518597 CUX1P39880 1505 aa21.17■□□□□ 0.98
RBM12B-203ENST00000518597 EIF4G3O43432 1585 aaKnown RBP21.13■□□□□ 0.97
RBM12B-203ENST00000518597 RAD54L2Q9Y4B4 1467 aa21.09■□□□□ 0.97
RBM12B-203ENST00000518597 FGD5Q6ZNL6 1462 aa21.08■□□□□ 0.97
RBM12B-203ENST00000518597 AQRO60306 1485 aaKnown RBP eCLIP21.05■□□□□ 0.96
RBM12B-203ENST00000518597 SOGA1O94964 1423 aa21.04■□□□□ 0.96
RBM12B-203ENST00000518597 WDR97A6NE52 1622 aa21.01■□□□□ 0.95
RBM12B-203ENST00000518597 OSCARQ8IYS5 282 aa20.97■□□□□ 0.95
RBM12B-203ENST00000518597 TDRD9Q8NDG6 1382 aaKnown RBP20.96■□□□□ 0.95
RBM12B-203ENST00000518597 BIVM-ERCC5R4GMW8 1640 aa20.94■□□□□ 0.94
RBM12B-203ENST00000518597 CHD1O14646 1710 aa20.94■□□□□ 0.94
RBM12B-203ENST00000518597 SYNJ1O43426 1573 aa20.93■□□□□ 0.94
RBM12B-203ENST00000518597 TOP2BQ02880 1626 aa20.92■□□□□ 0.94
RBM12B-203ENST00000518597 ABCA10Q8WWZ4 1543 aa20.88■□□□□ 0.93
RBM12B-203ENST00000518597 WRNQ14191 1432 aaPredicted RBP eCLIP20.87■□□□□ 0.93
RBM12B-203ENST00000518597 ABCA5Q8WWZ7 1642 aa20.86■□□□□ 0.93
RBM12B-203ENST00000518597 PBRM1Q86U86 1689 aa20.84■□□□□ 0.93
RBM12B-203ENST00000518597 SNAPC4Q5SXM2 1469 aa20.84■□□□□ 0.93
RBM12B-203ENST00000518597 GRIN2BQ13224 1484 aa20.82■□□□□ 0.92
RBM12B-203ENST00000518597 GAPVD1Q14C86 1478 aa20.8■□□□□ 0.92
RBM12B-203ENST00000518597 MAGI1Q96QZ7 1491 aaPredicted RBP20.8■□□□□ 0.92
RBM12B-203ENST00000518597 RIMBP3CA6NJZ7 1639 aa20.78■□□□□ 0.92
RBM12B-203ENST00000518597 RIMBP3BA6NNM3 1639 aa20.78■□□□□ 0.92
RBM12B-203ENST00000518597 RIMBP3Q9UFD9 1639 aa20.78■□□□□ 0.92
RBM12B-203ENST00000518597 ARHGEF11O15085 1522 aa20.73■□□□□ 0.91
RBM12B-203ENST00000518597 SYNJ2O15056 1496 aa20.71■□□□□ 0.91
RBM12B-203ENST00000518597 CLASP1Q7Z460 1538 aa20.71■□□□□ 0.91
RBM12B-203ENST00000518597 FBLN2P98095 1184 aa20.7■□□□□ 0.9
RBM12B-203ENST00000518597 TRIM41Q8WV44 630 aa20.66■□□□□ 0.9
RBM12B-203ENST00000518597 ADAMTS12P58397 1594 aa20.64■□□□□ 0.9
RBM12B-203ENST00000518597 CHMP7Q8WUX9 453 aaPredicted RBP20.64■□□□□ 0.89
RBM12B-203ENST00000518597 ERICH3Q5RHP9 1530 aa20.62■□□□□ 0.89
RBM12B-203ENST00000518597 GRIN2AQ12879 1464 aa20.57■□□□□ 0.88
RBM12B-203ENST00000518597 ARAP1Q96P48 1450 aa20.57■□□□□ 0.88
RBM12B-203ENST00000518597 FHAD1B1AJZ9 1412 aa20.54■□□□□ 0.88
RBM12B-203ENST00000518597 CEP170Q5SW79 1584 aa20.53■□□□□ 0.88
RBM12B-203ENST00000518597 NUP160Q12769 1436 aa20.53■□□□□ 0.88
RBM12B-203ENST00000518597 CYB5RLQ6IPT4 315 aa20.46■□□□□ 0.87
RBM12B-203ENST00000518597 IGF1RP08069 1367 aa20.45■□□□□ 0.86
RBM12B-203ENST00000518597 SHROOM2Q13796 1616 aa20.44■□□□□ 0.86
RBM12B-203ENST00000518597 ERCC6L2Q5T890 1561 aa20.43■□□□□ 0.86
RBM12B-203ENST00000518597 KIF27Q86VH2 1401 aa20.42■□□□□ 0.86
RBM12B-203ENST00000518597 CUL7Q14999 1698 aa20.38■□□□□ 0.85
RBM12B-203ENST00000518597 RUSC2Q8N2Y8 1516 aa20.35■□□□□ 0.85
RBM12B-203ENST00000518597 CARMIL1Q5VZK9 1371 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms