RNA–Protein interactions for RNA: ENST00000518574.1

SMIM19-207, Transcript of small integral membrane protein 19, humanhuman

TSL 3

Gene SMIM19, Length 233 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM19-207ENST00000518574 NISCHQ9Y2I1 1504 aa46.79■■■■■ 5.08
SMIM19-207ENST00000518574 CCDC180Q9P1Z9 1646 aa41.98■■■■■ 4.31
SMIM19-207ENST00000518574 ABCC9O60706 1549 aa41.67■■■■■ 4.26
SMIM19-207ENST00000518574 RB1CC1Q8TDY2 1594 aa39.83■■■■□ 3.97
SMIM19-207ENST00000518574 NACADO15069 1562 aa39.61■■■■□ 3.93
SMIM19-207ENST00000518574 DCAF8L2P0C7V8 631 aa39.3■■■■□ 3.88
SMIM19-207ENST00000518574 MYO15BQ96JP2 1530 aa39.15■■■■□ 3.86
SMIM19-207ENST00000518574 UNC13AQ9UPW8 1703 aa38.96■■■■□ 3.83
SMIM19-207ENST00000518574 DNAJC5BQ9UF47 199 aa38.87■■■■□ 3.81
SMIM19-207ENST00000518574 ZCCHC6Q5VYS8 1495 aaKnown RBP38.82■■■■□ 3.81
SMIM19-207ENST00000518574 PABPN1Q86U42 306 aaKnown RBP eCLIP38.78■■■■□ 3.8
SMIM19-207ENST00000518574 DCAF1Q9Y4B6 1507 aa38.71■■■■□ 3.79
SMIM19-207ENST00000518574 BICRAQ9NZM4 1560 aa38.63■■■■□ 3.77
SMIM19-207ENST00000518574 SHROOM4Q9ULL8 1493 aa38.21■■■■□ 3.71
SMIM19-207ENST00000518574 SCRIBQ14160 1630 aa38.17■■■■□ 3.7
SMIM19-207ENST00000518574 CC2D2AQ9P2K1 1620 aa37.7■■■■□ 3.63
SMIM19-207ENST00000518574 EIF4G1Q04637 1599 aaKnown RBP37.68■■■■□ 3.62
SMIM19-207ENST00000518574 CECR2Q9BXF3 1484 aa37.55■■■■□ 3.6
SMIM19-207ENST00000518574 NCAPD3P42695 1498 aa36.53■■■■□ 3.44
SMIM19-207ENST00000518574 SMARCA4P51532 1647 aa36.48■■■■□ 3.43
SMIM19-207ENST00000518574 ATAD2BQ9ULI0 1458 aa36.43■■■■□ 3.42
SMIM19-207ENST00000518574 SMARCA2P51531 1590 aa36.39■■■■□ 3.42
SMIM19-207ENST00000518574 BAZ1AQ9NRL2 1556 aaPredicted RBP36.33■■■■□ 3.41
SMIM19-207ENST00000518574 HMGXB3Q12766 1538 aa36.31■■■■□ 3.4
SMIM19-207ENST00000518574 PEG3Q9GZU2 1588 aa36.15■■■■□ 3.38
SMIM19-207ENST00000518574 BAZ1BQ9UIG0 1483 aaKnown RBP36.1■■■■□ 3.37
SMIM19-207ENST00000518574 MROH2BQ7Z745 1585 aa36.02■■■■□ 3.36
SMIM19-207ENST00000518574 ERCC6Q03468 1493 aa35.99■■■■□ 3.35
SMIM19-207ENST00000518574 CUX2O14529 1486 aa35.9■■■■□ 3.34
SMIM19-207ENST00000518574 NESP48681 1621 aa35.85■■■■□ 3.33
SMIM19-207ENST00000518574 LAMC3Q9Y6N6 1575 aa35.72■■■■□ 3.31
SMIM19-207ENST00000518574 WIZO95785 1651 aa35.62■■■■□ 3.29
SMIM19-207ENST00000518574 DNAJC5Q9H3Z4 198 aa35.61■■■■□ 3.29
SMIM19-207ENST00000518574 THOC2Q8NI27 1593 aaKnown RBP35.51■■■■□ 3.28
SMIM19-207ENST00000518574 PDS5BQ9NTI5 1447 aa35.47■■■■□ 3.27
SMIM19-207ENST00000518574 KIF21AQ7Z4S6 1674 aa35.46■■■■□ 3.27
SMIM19-207ENST00000518574 CADPSQ9ULU8 1353 aa35.41■■■■□ 3.26
SMIM19-207ENST00000518574 RSF1Q96T23 1441 aaPredicted RBP35.34■■■■□ 3.25
SMIM19-207ENST00000518574 TOP2AP11388 1531 aaKnown RBP35.2■■■■□ 3.23
SMIM19-207ENST00000518574 MRC2Q9UBG0 1479 aa35.15■■■■□ 3.22
SMIM19-207ENST00000518574 WDR62O43379 1518 aa35.07■■■■□ 3.21
SMIM19-207ENST00000518574 CFTRP13569 1480 aa35.07■■■■□ 3.2
SMIM19-207ENST00000518574 CEP164Q9UPV0 1460 aa35.05■■■■□ 3.2
SMIM19-207ENST00000518574 FANCD2Q9BXW9 1451 aa35.01■■■■□ 3.19
SMIM19-207ENST00000518574 PRDM2Q13029 1718 aa34.83■■■■□ 3.17
SMIM19-207ENST00000518574 CCDC88BA6NC98 1476 aa34.77■■■■□ 3.16
SMIM19-207ENST00000518574 URB2Q14146 1524 aaKnown RBP34.71■■■■□ 3.15
SMIM19-207ENST00000518574 TOPBP1Q92547 1522 aa34.38■■■■□ 3.09
SMIM19-207ENST00000518574 ABCC8Q09428 1581 aa34.36■■■■□ 3.09
SMIM19-207ENST00000518574 IFT140Q96RY7 1462 aa34.34■■■■□ 3.09
SMIM19-207ENST00000518574 DNMBPQ6XZF7 1577 aa34.3■■■■□ 3.08
SMIM19-207ENST00000518574 OSCARQ8IYS5 282 aa34.25■■■■□ 3.07
SMIM19-207ENST00000518574 ZNF608Q9ULD9 1512 aaPredicted RBP34.23■■■■□ 3.07
SMIM19-207ENST00000518574 EIF4G3O43432 1585 aaKnown RBP34.11■■■■□ 3.05
SMIM19-207ENST00000518574 TRIM41Q8WV44 630 aa34.08■■■■□ 3.05
SMIM19-207ENST00000518574 TARBP1Q13395 1621 aaKnown RBP34.08■■■■□ 3.05
SMIM19-207ENST00000518574 POLA1P09884 1462 aaPredicted RBP34.03■■■■□ 3.04
SMIM19-207ENST00000518574 AQRO60306 1485 aaKnown RBP eCLIP33.94■■■■□ 3.02
SMIM19-207ENST00000518574 RAD54L2Q9Y4B4 1467 aa33.87■■■■□ 3.01
SMIM19-207ENST00000518574 SOGA1O94964 1423 aa33.87■■■■□ 3.01
SMIM19-207ENST00000518574 SUPT5HO00267 1087 aaKnown RBP33.85■■■■□ 3.01
SMIM19-207ENST00000518574 CUX1P39880 1505 aa33.84■■■■□ 3.01
SMIM19-207ENST00000518574 FGD5Q6ZNL6 1462 aa33.84■■■■□ 3.01
SMIM19-207ENST00000518574 CHD1O14646 1710 aa33.83■■■■□ 3.01
SMIM19-207ENST00000518574 WDR97A6NE52 1622 aa33.81■■■■□ 3
SMIM19-207ENST00000518574 RIMBP3CA6NJZ7 1639 aa33.81■■■■□ 3
SMIM19-207ENST00000518574 RIMBP3BA6NNM3 1639 aa33.81■■■■□ 3
SMIM19-207ENST00000518574 RIMBP3Q9UFD9 1639 aa33.81■■■■□ 3
SMIM19-207ENST00000518574 TDRD9Q8NDG6 1382 aaKnown RBP33.75■■■□□ 2.99
SMIM19-207ENST00000518574 ARHGEF11O15085 1522 aa33.72■■■□□ 2.99
SMIM19-207ENST00000518574 FBLN2P98095 1184 aa33.65■■■□□ 2.98
SMIM19-207ENST00000518574 SNAPC4Q5SXM2 1469 aa33.62■■■□□ 2.97
SMIM19-207ENST00000518574 GRIN2BQ13224 1484 aa33.58■■■□□ 2.97
SMIM19-207ENST00000518574 MAGI1Q96QZ7 1491 aaPredicted RBP33.58■■■□□ 2.97
SMIM19-207ENST00000518574 PBRM1Q86U86 1689 aa33.5■■■□□ 2.95
SMIM19-207ENST00000518574 ABCA10Q8WWZ4 1543 aa33.49■■■□□ 2.95
SMIM19-207ENST00000518574 GAPVD1Q14C86 1478 aa33.48■■■□□ 2.95
SMIM19-207ENST00000518574 CHMP7Q8WUX9 453 aaPredicted RBP33.47■■■□□ 2.95
SMIM19-207ENST00000518574 SYNJ2O15056 1496 aa33.45■■■□□ 2.95
SMIM19-207ENST00000518574 SYNJ1O43426 1573 aa33.44■■■□□ 2.94
SMIM19-207ENST00000518574 ABCA5Q8WWZ7 1642 aa33.44■■■□□ 2.94
SMIM19-207ENST00000518574 CLASP1Q7Z460 1538 aa33.43■■■□□ 2.94
SMIM19-207ENST00000518574 BIVM-ERCC5R4GMW8 1640 aa33.4■■■□□ 2.94
SMIM19-207ENST00000518574 CYB5RLQ6IPT4 315 aa33.4■■■□□ 2.94
SMIM19-207ENST00000518574 TOP2BQ02880 1626 aa33.39■■■□□ 2.94
SMIM19-207ENST00000518574 ARAP1Q96P48 1450 aa33.38■■■□□ 2.93
SMIM19-207ENST00000518574 WRNQ14191 1432 aaPredicted RBP eCLIP33.38■■■□□ 2.93
SMIM19-207ENST00000518574 ADAMTS12P58397 1594 aa33.17■■■□□ 2.9
SMIM19-207ENST00000518574 GRIN2AQ12879 1464 aa33.15■■■□□ 2.9
SMIM19-207ENST00000518574 ERICH3Q5RHP9 1530 aa33.1■■■□□ 2.89
SMIM19-207ENST00000518574 FHAD1B1AJZ9 1412 aa33.07■■■□□ 2.88
SMIM19-207ENST00000518574 NUP160Q12769 1436 aa33.03■■■□□ 2.88
SMIM19-207ENST00000518574 CEP170Q5SW79 1584 aa33.01■■■□□ 2.88
SMIM19-207ENST00000518574 TRHP20396 242 aaPredicted RBP32.97■■■□□ 2.87
SMIM19-207ENST00000518574 SHROOM2Q13796 1616 aa32.9■■■□□ 2.86
SMIM19-207ENST00000518574 ERCC6L2Q5T890 1561 aa32.87■■■□□ 2.85
SMIM19-207ENST00000518574 KIF27Q86VH2 1401 aa32.72■■■□□ 2.83
SMIM19-207ENST00000518574 RUSC2Q8N2Y8 1516 aa32.7■■■□□ 2.83
SMIM19-207ENST00000518574 CUL7Q14999 1698 aa32.68■■■□□ 2.82
SMIM19-207ENST00000518574 PRG4Q92954 1404 aaPredicted RBP32.67■■■□□ 2.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms