RNA–Protein interactions for RNA: ENST00000518542.1

CSGALNACT1-206, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 3

Gene CSGALNACT1, Length 895 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-206ENST00000518542 AEBP2Q6ZN18 517 aaPredicted RBP19.29■□□□□ 0.68
CSGALNACT1-206ENST00000518542 CHIC1Q5VXU3 224 aa18.89■□□□□ 0.61
CSGALNACT1-206ENST00000518542 NISCHQ9Y2I1 1504 aa18.25■□□□□ 0.51
CSGALNACT1-206ENST00000518542 PHF23Q9BUL5 403 aaPredicted RBP16.64■□□□□ 0.25
CSGALNACT1-206ENST00000518542 SENP3Q9H4L4 574 aaPredicted RBP16.33■□□□□ 0.2
CSGALNACT1-206ENST00000518542 CCDC180Q9P1Z9 1646 aa16.19■□□□□ 0.18
CSGALNACT1-206ENST00000518542 ABCC9O60706 1549 aa16.03■□□□□ 0.16
CSGALNACT1-206ENST00000518542 PLPPR3Q6T4P5 718 aa15.37■□□□□ 0.05
CSGALNACT1-206ENST00000518542 DNAJC5BQ9UF47 199 aa15.31■□□□□ 0.04
CSGALNACT1-206ENST00000518542 DCAF8L2P0C7V8 631 aa15.24■□□□□ 0.03
CSGALNACT1-206ENST00000518542 ZCCHC6Q5VYS8 1495 aaKnown RBP15.23■□□□□ 0.03
CSGALNACT1-206ENST00000518542 NACADO15069 1562 aa15.18■□□□□ 0.02
CSGALNACT1-206ENST00000518542 FOXD1Q16676 465 aa15.17■□□□□ 0.02
CSGALNACT1-206ENST00000518542 RB1CC1Q8TDY2 1594 aa15.16■□□□□ 0.02
CSGALNACT1-206ENST00000518542 MYO15BQ96JP2 1530 aa15.12■□□□□ 0.01
CSGALNACT1-206ENST00000518542 DCAF1Q9Y4B6 1507 aa15.12■□□□□ 0.01
CSGALNACT1-206ENST00000518542 UNC13AQ9UPW8 1703 aa14.92□□□□□ -0.02
CSGALNACT1-206ENST00000518542 PABPN1Q86U42 306 aaKnown RBP eCLIP14.84□□□□□ -0.03
CSGALNACT1-206ENST00000518542 BICRAQ9NZM4 1560 aa14.79□□□□□ -0.04
CSGALNACT1-206ENST00000518542 SCRIBQ14160 1630 aa14.77□□□□□ -0.05
CSGALNACT1-206ENST00000518542 ADRA2BP18089 450 aa14.66□□□□□ -0.06
CSGALNACT1-206ENST00000518542 PPP6R1Q9UPN7 881 aa14.66□□□□□ -0.06
CSGALNACT1-206ENST00000518542 SHROOM4Q9ULL8 1493 aa14.55□□□□□ -0.08
CSGALNACT1-206ENST00000518542 CC2D2AQ9P2K1 1620 aa14.5□□□□□ -0.09
CSGALNACT1-206ENST00000518542 CECR2Q9BXF3 1484 aa14.45□□□□□ -0.1
CSGALNACT1-206ENST00000518542 EIF4G1Q04637 1599 aaKnown RBP14.39□□□□□ -0.11
CSGALNACT1-206ENST00000518542 PIAS4Q8N2W9 510 aaPredicted RBP14.33□□□□□ -0.12
CSGALNACT1-206ENST00000518542 DNAJC5Q9H3Z4 198 aa14.21□□□□□ -0.13
CSGALNACT1-206ENST00000518542 BAZ1AQ9NRL2 1556 aaPredicted RBP14.16□□□□□ -0.14
CSGALNACT1-206ENST00000518542 SMARCA4P51532 1647 aa14.14□□□□□ -0.15
CSGALNACT1-206ENST00000518542 MROH2BQ7Z745 1585 aa14.06□□□□□ -0.16
CSGALNACT1-206ENST00000518542 SMARCA2P51531 1590 aa14.04□□□□□ -0.16
CSGALNACT1-206ENST00000518542 ATAD2BQ9ULI0 1458 aa14□□□□□ -0.17
CSGALNACT1-206ENST00000518542 PEG3Q9GZU2 1588 aa13.99□□□□□ -0.17
CSGALNACT1-206ENST00000518542 NCAPD3P42695 1498 aa13.99□□□□□ -0.17
CSGALNACT1-206ENST00000518542 RSF1Q96T23 1441 aaPredicted RBP13.96□□□□□ -0.18
CSGALNACT1-206ENST00000518542 MSH5O43196 834 aa13.94□□□□□ -0.18
CSGALNACT1-206ENST00000518542 WIZO95785 1651 aa13.94□□□□□ -0.18
CSGALNACT1-206ENST00000518542 HMGXB3Q12766 1538 aa13.94□□□□□ -0.18
CSGALNACT1-206ENST00000518542 BAZ1BQ9UIG0 1483 aaKnown RBP13.93□□□□□ -0.18
CSGALNACT1-206ENST00000518542 CUX2O14529 1486 aa13.92□□□□□ -0.18
CSGALNACT1-206ENST00000518542 ERCC6Q03468 1493 aa13.8□□□□□ -0.2
CSGALNACT1-206ENST00000518542 TOP2AP11388 1531 aaKnown RBP13.8□□□□□ -0.2
CSGALNACT1-206ENST00000518542 SUPT5HO00267 1087 aaKnown RBP13.77□□□□□ -0.21
CSGALNACT1-206ENST00000518542 NESP48681 1621 aa13.72□□□□□ -0.21
CSGALNACT1-206ENST00000518542 THOC2Q8NI27 1593 aaKnown RBP13.67□□□□□ -0.22
CSGALNACT1-206ENST00000518542 CCDC88BA6NC98 1476 aa13.62□□□□□ -0.23
CSGALNACT1-206ENST00000518542 LAMC3Q9Y6N6 1575 aa13.62□□□□□ -0.23
CSGALNACT1-206ENST00000518542 CADPSQ9ULU8 1353 aa13.59□□□□□ -0.23
CSGALNACT1-206ENST00000518542 KIF21AQ7Z4S6 1674 aa13.58□□□□□ -0.24
CSGALNACT1-206ENST00000518542 PPP4R3CPQ6ZMV5 832 aa13.57□□□□□ -0.24
CSGALNACT1-206ENST00000518542 CFTRP13569 1480 aa13.54□□□□□ -0.24
CSGALNACT1-206ENST00000518542 PDS5BQ9NTI5 1447 aa13.52□□□□□ -0.25
CSGALNACT1-206ENST00000518542 PRDM2Q13029 1718 aa13.5□□□□□ -0.25
CSGALNACT1-206ENST00000518542 FANCD2Q9BXW9 1451 aa13.43□□□□□ -0.26
CSGALNACT1-206ENST00000518542 TRIM41Q8WV44 630 aa13.42□□□□□ -0.26
CSGALNACT1-206ENST00000518542 CEP164Q9UPV0 1460 aa13.42□□□□□ -0.26
CSGALNACT1-206ENST00000518542 WDR62O43379 1518 aa13.39□□□□□ -0.27
CSGALNACT1-206ENST00000518542 SCAF1Q9H7N4 1312 aaKnown RBP13.39□□□□□ -0.27
CSGALNACT1-206ENST00000518542 MRC2Q9UBG0 1479 aa13.38□□□□□ -0.27
CSGALNACT1-206ENST00000518542 KCNA4P22459 653 aa13.35□□□□□ -0.27
CSGALNACT1-206ENST00000518542 ABCC8Q09428 1581 aa13.28□□□□□ -0.28
CSGALNACT1-206ENST00000518542 MAPK8IP2Q13387 824 aaPredicted RBP13.28□□□□□ -0.28
CSGALNACT1-206ENST00000518542 URB2Q14146 1524 aaKnown RBP13.28□□□□□ -0.28
CSGALNACT1-206ENST00000518542 DNMBPQ6XZF7 1577 aa13.24□□□□□ -0.29
CSGALNACT1-206ENST00000518542 TOPBP1Q92547 1522 aa13.23□□□□□ -0.29
CSGALNACT1-206ENST00000518542 NCBP3Q53F19 620 aaKnown RBP13.21□□□□□ -0.29
CSGALNACT1-206ENST00000518542 CUX1P39880 1505 aa13.18□□□□□ -0.3
CSGALNACT1-206ENST00000518542 OSCARQ8IYS5 282 aa13.18□□□□□ -0.3
CSGALNACT1-206ENST00000518542 WRNQ14191 1432 aaPredicted RBP eCLIP13.18□□□□□ -0.3
CSGALNACT1-206ENST00000518542 RIMBP3CA6NJZ7 1639 aa13.15□□□□□ -0.3
CSGALNACT1-206ENST00000518542 RIMBP3BA6NNM3 1639 aa13.15□□□□□ -0.3
CSGALNACT1-206ENST00000518542 RIMBP3Q9UFD9 1639 aa13.15□□□□□ -0.3
CSGALNACT1-206ENST00000518542 CNKSR2Q8WXI2 1034 aa13.15□□□□□ -0.3
CSGALNACT1-206ENST00000518542 TOP2BQ02880 1626 aa13.13□□□□□ -0.31
CSGALNACT1-206ENST00000518542 BIVM-ERCC5R4GMW8 1640 aa13.13□□□□□ -0.31
CSGALNACT1-206ENST00000518542 FGD5Q6ZNL6 1462 aa13.13□□□□□ -0.31
CSGALNACT1-206ENST00000518542 SYNJ1O43426 1573 aa13.12□□□□□ -0.31
CSGALNACT1-206ENST00000518542 POLA1P09884 1462 aaPredicted RBP13.12□□□□□ -0.31
CSGALNACT1-206ENST00000518542 IFT140Q96RY7 1462 aa13.12□□□□□ -0.31
CSGALNACT1-206ENST00000518542 SOGA1O94964 1423 aa13.1□□□□□ -0.31
CSGALNACT1-206ENST00000518542 TARBP1Q13395 1621 aaKnown RBP13.07□□□□□ -0.32
CSGALNACT1-206ENST00000518542 RAD54L2Q9Y4B4 1467 aa13.06□□□□□ -0.32
CSGALNACT1-206ENST00000518542 ARHGEF11O15085 1522 aa13.05□□□□□ -0.32
CSGALNACT1-206ENST00000518542 ZNF608Q9ULD9 1512 aaPredicted RBP13.05□□□□□ -0.32
CSGALNACT1-206ENST00000518542 DMRT2Q9Y5R5 561 aa13.05□□□□□ -0.32
CSGALNACT1-206ENST00000518542 NPM3O75607 178 aaKnown RBP13.04□□□□□ -0.32
CSGALNACT1-206ENST00000518542 WDR97A6NE52 1622 aa13.02□□□□□ -0.33
CSGALNACT1-206ENST00000518542 ABCA10Q8WWZ4 1543 aa13.01□□□□□ -0.33
CSGALNACT1-206ENST00000518542 EIF4G3O43432 1585 aaKnown RBP13□□□□□ -0.33
CSGALNACT1-206ENST00000518542 TDRD9Q8NDG6 1382 aaKnown RBP12.99□□□□□ -0.33
CSGALNACT1-206ENST00000518542 AQRO60306 1485 aaKnown RBP eCLIP12.98□□□□□ -0.33
CSGALNACT1-206ENST00000518542 CHD1O14646 1710 aa12.97□□□□□ -0.33
CSGALNACT1-206ENST00000518542 GAPVD1Q14C86 1478 aa12.95□□□□□ -0.34
CSGALNACT1-206ENST00000518542 ABCA5Q8WWZ7 1642 aa12.94□□□□□ -0.34
CSGALNACT1-206ENST00000518542 PBRM1Q86U86 1689 aa12.93□□□□□ -0.34
CSGALNACT1-206ENST00000518542 GRIN2BQ13224 1484 aa12.92□□□□□ -0.34
CSGALNACT1-206ENST00000518542 ARAP1Q96P48 1450 aa12.91□□□□□ -0.34
CSGALNACT1-206ENST00000518542 KIF27Q86VH2 1401 aa12.91□□□□□ -0.34
CSGALNACT1-206ENST00000518542 CYB5RLQ6IPT4 315 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms