RNA–Protein interactions for RNA: ENST00000518461.2

HR-205, Transcript of HR, lysine demethylase and nuclear receptor corepressor, humanhuman

TSL 4

Gene HR, Length 560 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HR-205ENST00000518461 NISCHQ9Y2I1 1504 aa28.98■■■□□ 2.23
HR-205ENST00000518461 CCDC180Q9P1Z9 1646 aa25.45■■□□□ 1.66
HR-205ENST00000518461 ABCC9O60706 1549 aa24.45■■□□□ 1.51
HR-205ENST00000518461 ZCCHC6Q5VYS8 1495 aaKnown RBP24.22■■□□□ 1.47
HR-205ENST00000518461 DCAF8L2P0C7V8 631 aa24.09■■□□□ 1.45
HR-205ENST00000518461 DCAF1Q9Y4B6 1507 aa23.95■■□□□ 1.43
HR-205ENST00000518461 MYO15BQ96JP2 1530 aa23.84■■□□□ 1.41
HR-205ENST00000518461 NACADO15069 1562 aa23.82■■□□□ 1.4
HR-205ENST00000518461 RB1CC1Q8TDY2 1594 aa23.69■■□□□ 1.38
HR-205ENST00000518461 SCRIBQ14160 1630 aa23.32■■□□□ 1.32
HR-205ENST00000518461 SHROOM4Q9ULL8 1493 aa23.31■■□□□ 1.32
HR-205ENST00000518461 UNC13AQ9UPW8 1703 aa23.23■■□□□ 1.31
HR-205ENST00000518461 BICRAQ9NZM4 1560 aa23.03■■□□□ 1.28
HR-205ENST00000518461 PABPN1Q86U42 306 aaKnown RBP eCLIP23.02■■□□□ 1.28
HR-205ENST00000518461 CECR2Q9BXF3 1484 aa22.57■■□□□ 1.2
HR-205ENST00000518461 MROH2BQ7Z745 1585 aa22.38■■□□□ 1.17
HR-205ENST00000518461 BAZ1AQ9NRL2 1556 aaPredicted RBP22.38■■□□□ 1.17
HR-205ENST00000518461 SMARCA4P51532 1647 aa22.35■■□□□ 1.17
HR-205ENST00000518461 EIF4G1Q04637 1599 aaKnown RBP22.33■■□□□ 1.17
HR-205ENST00000518461 RSF1Q96T23 1441 aaPredicted RBP22.32■■□□□ 1.16
HR-205ENST00000518461 SUPT5HO00267 1087 aaKnown RBP22.25■■□□□ 1.15
HR-205ENST00000518461 WIZO95785 1651 aa22.17■■□□□ 1.14
HR-205ENST00000518461 CC2D2AQ9P2K1 1620 aa22.12■■□□□ 1.13
HR-205ENST00000518461 ATAD2BQ9ULI0 1458 aa22.1■■□□□ 1.13
HR-205ENST00000518461 PEG3Q9GZU2 1588 aa22.1■■□□□ 1.13
HR-205ENST00000518461 DNAJC5BQ9UF47 199 aa22.06■■□□□ 1.12
HR-205ENST00000518461 SMARCA2P51531 1590 aa22.05■■□□□ 1.12
HR-205ENST00000518461 NCAPD3P42695 1498 aa22.01■■□□□ 1.11
HR-205ENST00000518461 BAZ1BQ9UIG0 1483 aaKnown RBP21.92■■□□□ 1.1
HR-205ENST00000518461 TOP2AP11388 1531 aaKnown RBP21.9■■□□□ 1.1
HR-205ENST00000518461 HMGXB3Q12766 1538 aa21.89■■□□□ 1.09
HR-205ENST00000518461 CCDC88BA6NC98 1476 aa21.71■■□□□ 1.07
HR-205ENST00000518461 CADPSQ9ULU8 1353 aa21.4■■□□□ 1.02
HR-205ENST00000518461 CFTRP13569 1480 aa21.38■■□□□ 1.01
HR-205ENST00000518461 NESP48681 1621 aa21.35■■□□□ 1.01
HR-205ENST00000518461 LAMC3Q9Y6N6 1575 aa21.29■■□□□ 1
HR-205ENST00000518461 PRDM2Q13029 1718 aa21.21■□□□□ 0.99
HR-205ENST00000518461 PDS5BQ9NTI5 1447 aa21.14■□□□□ 0.98
HR-205ENST00000518461 FANCD2Q9BXW9 1451 aa21.13■□□□□ 0.97
HR-205ENST00000518461 CHIC1Q5VXU3 224 aa21.11■□□□□ 0.97
HR-205ENST00000518461 ABCC8Q09428 1581 aa21.08■□□□□ 0.97
HR-205ENST00000518461 KIF21AQ7Z4S6 1674 aa21.07■□□□□ 0.96
HR-205ENST00000518461 CEP164Q9UPV0 1460 aa21.02■□□□□ 0.96
HR-205ENST00000518461 WRNQ14191 1432 aaPredicted RBP eCLIP21■□□□□ 0.95
HR-205ENST00000518461 ERCC6Q03468 1493 aa20.97■□□□□ 0.95
HR-205ENST00000518461 TRIM41Q8WV44 630 aa20.96■□□□□ 0.95
HR-205ENST00000518461 CUX1P39880 1505 aa20.94■□□□□ 0.94
HR-205ENST00000518461 SYNJ1O43426 1573 aa20.93■□□□□ 0.94
HR-205ENST00000518461 URB2Q14146 1524 aaKnown RBP20.92■□□□□ 0.94
HR-205ENST00000518461 MRC2Q9UBG0 1479 aa20.89■□□□□ 0.94
HR-205ENST00000518461 TOP2BQ02880 1626 aa20.88■□□□□ 0.93
HR-205ENST00000518461 TOPBP1Q92547 1522 aa20.88■□□□□ 0.93
HR-205ENST00000518461 BIVM-ERCC5R4GMW8 1640 aa20.87■□□□□ 0.93
HR-205ENST00000518461 DNMBPQ6XZF7 1577 aa20.86■□□□□ 0.93
HR-205ENST00000518461 THOC2Q8NI27 1593 aaKnown RBP20.82■□□□□ 0.92
HR-205ENST00000518461 WDR62O43379 1518 aa20.79■□□□□ 0.92
HR-205ENST00000518461 FGD5Q6ZNL6 1462 aa20.76■□□□□ 0.91
HR-205ENST00000518461 POLA1P09884 1462 aaPredicted RBP20.73■□□□□ 0.91
HR-205ENST00000518461 SOGA1O94964 1423 aa20.7■□□□□ 0.9
HR-205ENST00000518461 RAD54L2Q9Y4B4 1467 aa20.69■□□□□ 0.9
HR-205ENST00000518461 CUX2O14529 1486 aa20.68■□□□□ 0.9
HR-205ENST00000518461 TARBP1Q13395 1621 aaKnown RBP20.61■□□□□ 0.89
HR-205ENST00000518461 RUSC2Q8N2Y8 1516 aa20.6■□□□□ 0.89
HR-205ENST00000518461 IFT140Q96RY7 1462 aa20.58■□□□□ 0.89
HR-205ENST00000518461 ABCA10Q8WWZ4 1543 aa20.58■□□□□ 0.88
HR-205ENST00000518461 FAM9AQ8IZU1 332 aaPredicted RBP20.56■□□□□ 0.88
HR-205ENST00000518461 WDR97A6NE52 1622 aa20.53■□□□□ 0.88
HR-205ENST00000518461 TDRD9Q8NDG6 1382 aaKnown RBP20.53■□□□□ 0.88
HR-205ENST00000518461 KIF27Q86VH2 1401 aa20.51■□□□□ 0.87
HR-205ENST00000518461 ZNF608Q9ULD9 1512 aaPredicted RBP20.49■□□□□ 0.87
HR-205ENST00000518461 AQRO60306 1485 aaKnown RBP eCLIP20.47■□□□□ 0.87
HR-205ENST00000518461 CSRNP3Q8WYN3 585 aa20.46■□□□□ 0.87
HR-205ENST00000518461 EEA1Q15075 1411 aa20.45■□□□□ 0.86
HR-205ENST00000518461 ABCA5Q8WWZ7 1642 aa20.43■□□□□ 0.86
HR-205ENST00000518461 IGF1RP08069 1367 aa20.43■□□□□ 0.86
HR-205ENST00000518461 GAPVD1Q14C86 1478 aa20.43■□□□□ 0.86
HR-205ENST00000518461 EIF4G3O43432 1585 aaKnown RBP20.37■□□□□ 0.85
HR-205ENST00000518461 GRIN2BQ13224 1484 aa20.33■□□□□ 0.85
HR-205ENST00000518461 PBRM1Q86U86 1689 aa20.32■□□□□ 0.84
HR-205ENST00000518461 ERICH3Q5RHP9 1530 aa20.32■□□□□ 0.84
HR-205ENST00000518461 LOC105371045A0A1W2PR82 267 aa20.31■□□□□ 0.84
HR-205ENST00000518461 CARMIL1Q5VZK9 1371 aa20.29■□□□□ 0.84
HR-205ENST00000518461 PRXQ9BXM0 1461 aa20.28■□□□□ 0.84
HR-205ENST00000518461 EHMT2Q96KQ7 1210 aa20.26■□□□□ 0.83
HR-205ENST00000518461 SNAPC4Q5SXM2 1469 aa20.23■□□□□ 0.83
HR-205ENST00000518461 CUL7Q14999 1698 aa20.22■□□□□ 0.83
HR-205ENST00000518461 KIF21BO75037 1637 aa20.22■□□□□ 0.83
HR-205ENST00000518461 FHAD1B1AJZ9 1412 aa20.2■□□□□ 0.82
HR-205ENST00000518461 RAPGEF2Q9Y4G8 1499 aa20.2■□□□□ 0.82
HR-205ENST00000518461 MAGI1Q96QZ7 1491 aaPredicted RBP20.19■□□□□ 0.82
HR-205ENST00000518461 ADAMTS12P58397 1594 aa20.18■□□□□ 0.82
HR-205ENST00000518461 GOLGA3Q08378 1498 aa20.15■□□□□ 0.82
HR-205ENST00000518461 CHMP7Q8WUX9 453 aaPredicted RBP20.13■□□□□ 0.81
HR-205ENST00000518461 SYNJ2O15056 1496 aa20.12■□□□□ 0.81
HR-205ENST00000518461 UBTFP17480 764 aaKnown RBP20.12■□□□□ 0.81
HR-205ENST00000518461 FBLN2P98095 1184 aa20.12■□□□□ 0.81
HR-205ENST00000518461 GRIN2AQ12879 1464 aa20.07■□□□□ 0.8
HR-205ENST00000518461 TNIKQ9UKE5 1360 aa20.05■□□□□ 0.8
HR-205ENST00000518461 CHD1O14646 1710 aa20.04■□□□□ 0.8
HR-205ENST00000518461 CEP170Q5SW79 1584 aa19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms