RNA–Protein interactions for RNA: ENST00000518440.1

MSC-202, Transcript of musculin, humanhuman

TSL 3

Gene MSC, Length 455 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSC-202ENST00000518440 NISCHQ9Y2I1 1504 aa30.7■■■□□ 2.51
MSC-202ENST00000518440 ABCC9O60706 1549 aa27.57■■■□□ 2
MSC-202ENST00000518440 CCDC180Q9P1Z9 1646 aa27.52■■■□□ 2
MSC-202ENST00000518440 RB1CC1Q8TDY2 1594 aa26.24■■□□□ 1.79
MSC-202ENST00000518440 NACADO15069 1562 aa26.07■■□□□ 1.76
MSC-202ENST00000518440 DCAF8L2P0C7V8 631 aa25.96■■□□□ 1.75
MSC-202ENST00000518440 DNAJC5BQ9UF47 199 aa25.89■■□□□ 1.74
MSC-202ENST00000518440 MYO15BQ96JP2 1530 aa25.73■■□□□ 1.71
MSC-202ENST00000518440 PABPN1Q86U42 306 aaKnown RBP eCLIP25.69■■□□□ 1.7
MSC-202ENST00000518440 UNC13AQ9UPW8 1703 aa25.52■■□□□ 1.68
MSC-202ENST00000518440 BICRAQ9NZM4 1560 aa25.44■■□□□ 1.66
MSC-202ENST00000518440 ZCCHC6Q5VYS8 1495 aaKnown RBP25.43■■□□□ 1.66
MSC-202ENST00000518440 DCAF1Q9Y4B6 1507 aa25.38■■□□□ 1.65
MSC-202ENST00000518440 SHROOM4Q9ULL8 1493 aa25.18■■□□□ 1.62
MSC-202ENST00000518440 SCRIBQ14160 1630 aa25.06■■□□□ 1.6
MSC-202ENST00000518440 CC2D2AQ9P2K1 1620 aa24.88■■□□□ 1.57
MSC-202ENST00000518440 CECR2Q9BXF3 1484 aa24.86■■□□□ 1.57
MSC-202ENST00000518440 EIF4G1Q04637 1599 aaKnown RBP24.84■■□□□ 1.57
MSC-202ENST00000518440 NCAPD3P42695 1498 aa24.09■■□□□ 1.45
MSC-202ENST00000518440 ATAD2BQ9ULI0 1458 aa24■■□□□ 1.43
MSC-202ENST00000518440 SMARCA2P51531 1590 aa23.93■■□□□ 1.42
MSC-202ENST00000518440 SMARCA4P51532 1647 aa23.92■■□□□ 1.42
MSC-202ENST00000518440 HMGXB3Q12766 1538 aa23.88■■□□□ 1.41
MSC-202ENST00000518440 DNAJC5Q9H3Z4 198 aa23.85■■□□□ 1.41
MSC-202ENST00000518440 BAZ1AQ9NRL2 1556 aaPredicted RBP23.84■■□□□ 1.41
MSC-202ENST00000518440 ERCC6Q03468 1493 aa23.83■■□□□ 1.41
MSC-202ENST00000518440 CUX2O14529 1486 aa23.81■■□□□ 1.4
MSC-202ENST00000518440 BAZ1BQ9UIG0 1483 aaKnown RBP23.76■■□□□ 1.39
MSC-202ENST00000518440 PEG3Q9GZU2 1588 aa23.71■■□□□ 1.39
MSC-202ENST00000518440 NESP48681 1621 aa23.65■■□□□ 1.38
MSC-202ENST00000518440 MROH2BQ7Z745 1585 aa23.63■■□□□ 1.37
MSC-202ENST00000518440 LAMC3Q9Y6N6 1575 aa23.52■■□□□ 1.36
MSC-202ENST00000518440 PDS5BQ9NTI5 1447 aa23.44■■□□□ 1.34
MSC-202ENST00000518440 THOC2Q8NI27 1593 aaKnown RBP23.4■■□□□ 1.34
MSC-202ENST00000518440 CADPSQ9ULU8 1353 aa23.37■■□□□ 1.33
MSC-202ENST00000518440 WIZO95785 1651 aa23.3■■□□□ 1.32
MSC-202ENST00000518440 KIF21AQ7Z4S6 1674 aa23.29■■□□□ 1.32
MSC-202ENST00000518440 MRC2Q9UBG0 1479 aa23.2■■□□□ 1.3
MSC-202ENST00000518440 RSF1Q96T23 1441 aaPredicted RBP23.16■■□□□ 1.3
MSC-202ENST00000518440 WDR62O43379 1518 aa23.13■■□□□ 1.29
MSC-202ENST00000518440 CEP164Q9UPV0 1460 aa23.11■■□□□ 1.29
MSC-202ENST00000518440 CFTRP13569 1480 aa23.08■■□□□ 1.29
MSC-202ENST00000518440 FANCD2Q9BXW9 1451 aa23.07■■□□□ 1.28
MSC-202ENST00000518440 TOP2AP11388 1531 aaKnown RBP23.06■■□□□ 1.28
MSC-202ENST00000518440 URB2Q14146 1524 aaKnown RBP22.86■■□□□ 1.25
MSC-202ENST00000518440 CCDC88BA6NC98 1476 aa22.81■■□□□ 1.24
MSC-202ENST00000518440 TRIM41Q8WV44 630 aa22.77■■□□□ 1.24
MSC-202ENST00000518440 OSCARQ8IYS5 282 aa22.76■■□□□ 1.23
MSC-202ENST00000518440 PRDM2Q13029 1718 aa22.73■■□□□ 1.23
MSC-202ENST00000518440 IFT140Q96RY7 1462 aa22.66■■□□□ 1.22
MSC-202ENST00000518440 ABCC8Q09428 1581 aa22.63■■□□□ 1.21
MSC-202ENST00000518440 TOPBP1Q92547 1522 aa22.62■■□□□ 1.21
MSC-202ENST00000518440 ZNF608Q9ULD9 1512 aaPredicted RBP22.57■■□□□ 1.2
MSC-202ENST00000518440 DNMBPQ6XZF7 1577 aa22.53■■□□□ 1.2
MSC-202ENST00000518440 EIF4G3O43432 1585 aaKnown RBP22.42■■□□□ 1.18
MSC-202ENST00000518440 AQRO60306 1485 aaKnown RBP eCLIP22.4■■□□□ 1.18
MSC-202ENST00000518440 POLA1P09884 1462 aaPredicted RBP22.39■■□□□ 1.17
MSC-202ENST00000518440 TARBP1Q13395 1621 aaKnown RBP22.39■■□□□ 1.17
MSC-202ENST00000518440 RIMBP3CA6NJZ7 1639 aa22.35■■□□□ 1.17
MSC-202ENST00000518440 RIMBP3BA6NNM3 1639 aa22.35■■□□□ 1.17
MSC-202ENST00000518440 RIMBP3Q9UFD9 1639 aa22.35■■□□□ 1.17
MSC-202ENST00000518440 SOGA1O94964 1423 aa22.32■■□□□ 1.16
MSC-202ENST00000518440 ARHGEF11O15085 1522 aa22.32■■□□□ 1.16
MSC-202ENST00000518440 RAD54L2Q9Y4B4 1467 aa22.29■■□□□ 1.16
MSC-202ENST00000518440 FBLN2P98095 1184 aa22.28■■□□□ 1.16
MSC-202ENST00000518440 TDRD9Q8NDG6 1382 aaKnown RBP22.25■■□□□ 1.15
MSC-202ENST00000518440 FGD5Q6ZNL6 1462 aa22.24■■□□□ 1.15
MSC-202ENST00000518440 CHD1O14646 1710 aa22.23■■□□□ 1.15
MSC-202ENST00000518440 CYB5RLQ6IPT4 315 aa22.21■■□□□ 1.15
MSC-202ENST00000518440 CUX1P39880 1505 aa22.21■■□□□ 1.15
MSC-202ENST00000518440 WDR97A6NE52 1622 aa22.2■■□□□ 1.15
MSC-202ENST00000518440 SNAPC4Q5SXM2 1469 aa22.15■■□□□ 1.14
MSC-202ENST00000518440 CHMP7Q8WUX9 453 aaPredicted RBP22.14■■□□□ 1.13
MSC-202ENST00000518440 SUPT5HO00267 1087 aaKnown RBP22.13■■□□□ 1.13
MSC-202ENST00000518440 GRIN2BQ13224 1484 aa22.13■■□□□ 1.13
MSC-202ENST00000518440 MAGI1Q96QZ7 1491 aaPredicted RBP22.13■■□□□ 1.13
MSC-202ENST00000518440 ARAP1Q96P48 1450 aa22.09■■□□□ 1.13
MSC-202ENST00000518440 SYNJ1O43426 1573 aa22.04■■□□□ 1.12
MSC-202ENST00000518440 SYNJ2O15056 1496 aa22.04■■□□□ 1.12
MSC-202ENST00000518440 GAPVD1Q14C86 1478 aa22.03■■□□□ 1.12
MSC-202ENST00000518440 CLASP1Q7Z460 1538 aa22.03■■□□□ 1.12
MSC-202ENST00000518440 ABCA10Q8WWZ4 1543 aa22.01■■□□□ 1.11
MSC-202ENST00000518440 TRHP20396 242 aaPredicted RBP21.97■■□□□ 1.11
MSC-202ENST00000518440 WRNQ14191 1432 aaPredicted RBP eCLIP21.95■■□□□ 1.1
MSC-202ENST00000518440 PBRM1Q86U86 1689 aa21.93■■□□□ 1.1
MSC-202ENST00000518440 ABCA5Q8WWZ7 1642 aa21.93■■□□□ 1.1
MSC-202ENST00000518440 TOP2BQ02880 1626 aa21.84■■□□□ 1.09
MSC-202ENST00000518440 BIVM-ERCC5R4GMW8 1640 aa21.82■■□□□ 1.08
MSC-202ENST00000518440 GRIN2AQ12879 1464 aa21.82■■□□□ 1.08
MSC-202ENST00000518440 FHAD1B1AJZ9 1412 aa21.78■■□□□ 1.08
MSC-202ENST00000518440 NUP160Q12769 1436 aa21.77■■□□□ 1.08
MSC-202ENST00000518440 ADAMTS12P58397 1594 aa21.77■■□□□ 1.08
MSC-202ENST00000518440 ERICH3Q5RHP9 1530 aa21.73■■□□□ 1.07
MSC-202ENST00000518440 CEP170Q5SW79 1584 aa21.7■■□□□ 1.06
MSC-202ENST00000518440 ERCC6L2Q5T890 1561 aa21.65■■□□□ 1.06
MSC-202ENST00000518440 SHROOM2Q13796 1616 aa21.62■■□□□ 1.05
MSC-202ENST00000518440 JPH4Q96JJ6 628 aa21.58■■□□□ 1.05
MSC-202ENST00000518440 PRG4Q92954 1404 aaPredicted RBP21.55■■□□□ 1.04
MSC-202ENST00000518440 KIF27Q86VH2 1401 aa21.48■■□□□ 1.03
MSC-202ENST00000518440 IGF1RP08069 1367 aa21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 122.5 ms