RNA–Protein interactions for RNA: ENST00000518391.5

CDK16-212, Transcript of cyclin dependent kinase 16, humanhuman

TSL 3

Gene CDK16, Length 785 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK16-212ENST00000518391 NISCHQ9Y2I1 1504 aa38.74■■■■□ 3.79
CDK16-212ENST00000518391 CCDC180Q9P1Z9 1646 aa34.72■■■■□ 3.15
CDK16-212ENST00000518391 ABCC9O60706 1549 aa34.49■■■■□ 3.11
CDK16-212ENST00000518391 RB1CC1Q8TDY2 1594 aa32.92■■■□□ 2.86
CDK16-212ENST00000518391 NACADO15069 1562 aa32.76■■■□□ 2.84
CDK16-212ENST00000518391 MYO15BQ96JP2 1530 aa32.44■■■□□ 2.78
CDK16-212ENST00000518391 DCAF8L2P0C7V8 631 aa32.36■■■□□ 2.77
CDK16-212ENST00000518391 DNAJC5BQ9UF47 199 aa32.33■■■□□ 2.77
CDK16-212ENST00000518391 UNC13AQ9UPW8 1703 aa32.26■■■□□ 2.75
CDK16-212ENST00000518391 ZCCHC6Q5VYS8 1495 aaKnown RBP32.16■■■□□ 2.74
CDK16-212ENST00000518391 PABPN1Q86U42 306 aaKnown RBP eCLIP32.09■■■□□ 2.73
CDK16-212ENST00000518391 BICRAQ9NZM4 1560 aa32.07■■■□□ 2.72
CDK16-212ENST00000518391 DCAF1Q9Y4B6 1507 aa32.06■■■□□ 2.72
CDK16-212ENST00000518391 SHROOM4Q9ULL8 1493 aa31.63■■■□□ 2.65
CDK16-212ENST00000518391 SCRIBQ14160 1630 aa31.56■■■□□ 2.64
CDK16-212ENST00000518391 CC2D2AQ9P2K1 1620 aa31.22■■■□□ 2.59
CDK16-212ENST00000518391 EIF4G1Q04637 1599 aaKnown RBP31.2■■■□□ 2.58
CDK16-212ENST00000518391 CECR2Q9BXF3 1484 aa31.08■■■□□ 2.57
CDK16-212ENST00000518391 NCAPD3P42695 1498 aa30.28■■■□□ 2.44
CDK16-212ENST00000518391 ATAD2BQ9ULI0 1458 aa30.19■■■□□ 2.42
CDK16-212ENST00000518391 SMARCA4P51532 1647 aa30.18■■■□□ 2.42
CDK16-212ENST00000518391 SMARCA2P51531 1590 aa30.07■■■□□ 2.4
CDK16-212ENST00000518391 HMGXB3Q12766 1538 aa30.06■■■□□ 2.4
CDK16-212ENST00000518391 BAZ1AQ9NRL2 1556 aaPredicted RBP30.03■■■□□ 2.4
CDK16-212ENST00000518391 PEG3Q9GZU2 1588 aa29.97■■■□□ 2.39
CDK16-212ENST00000518391 MROH2BQ7Z745 1585 aa29.86■■■□□ 2.37
CDK16-212ENST00000518391 BAZ1BQ9UIG0 1483 aaKnown RBP29.83■■■□□ 2.37
CDK16-212ENST00000518391 NESP48681 1621 aa29.72■■■□□ 2.35
CDK16-212ENST00000518391 CUX2O14529 1486 aa29.71■■■□□ 2.35
CDK16-212ENST00000518391 ERCC6Q03468 1493 aa29.69■■■□□ 2.34
CDK16-212ENST00000518391 DNAJC5Q9H3Z4 198 aa29.54■■■□□ 2.32
CDK16-212ENST00000518391 LAMC3Q9Y6N6 1575 aa29.53■■■□□ 2.32
CDK16-212ENST00000518391 WIZO95785 1651 aa29.47■■■□□ 2.31
CDK16-212ENST00000518391 THOC2Q8NI27 1593 aaKnown RBP29.44■■■□□ 2.3
CDK16-212ENST00000518391 KIF21AQ7Z4S6 1674 aa29.34■■■□□ 2.29
CDK16-212ENST00000518391 CADPSQ9ULU8 1353 aa29.31■■■□□ 2.28
CDK16-212ENST00000518391 PDS5BQ9NTI5 1447 aa29.29■■■□□ 2.28
CDK16-212ENST00000518391 RSF1Q96T23 1441 aaPredicted RBP29.28■■■□□ 2.28
CDK16-212ENST00000518391 TOP2AP11388 1531 aaKnown RBP29.13■■■□□ 2.25
CDK16-212ENST00000518391 MRC2Q9UBG0 1479 aa29.08■■■□□ 2.25
CDK16-212ENST00000518391 WDR62O43379 1518 aa29.06■■■□□ 2.24
CDK16-212ENST00000518391 CFTRP13569 1480 aa29.05■■■□□ 2.24
CDK16-212ENST00000518391 FANCD2Q9BXW9 1451 aa28.96■■■□□ 2.23
CDK16-212ENST00000518391 CEP164Q9UPV0 1460 aa28.96■■■□□ 2.23
CDK16-212ENST00000518391 CCDC88BA6NC98 1476 aa28.78■■■□□ 2.2
CDK16-212ENST00000518391 URB2Q14146 1524 aaKnown RBP28.78■■■□□ 2.2
CDK16-212ENST00000518391 PRDM2Q13029 1718 aa28.76■■■□□ 2.19
CDK16-212ENST00000518391 TOPBP1Q92547 1522 aa28.46■■■□□ 2.15
CDK16-212ENST00000518391 IFT140Q96RY7 1462 aa28.4■■■□□ 2.14
CDK16-212ENST00000518391 ZNF608Q9ULD9 1512 aaPredicted RBP28.38■■■□□ 2.13
CDK16-212ENST00000518391 ABCC8Q09428 1581 aa28.37■■■□□ 2.13
CDK16-212ENST00000518391 DNMBPQ6XZF7 1577 aa28.37■■■□□ 2.13
CDK16-212ENST00000518391 OSCARQ8IYS5 282 aa28.29■■■□□ 2.12
CDK16-212ENST00000518391 TARBP1Q13395 1621 aaKnown RBP28.25■■■□□ 2.11
CDK16-212ENST00000518391 EIF4G3O43432 1585 aaKnown RBP28.22■■■□□ 2.11
CDK16-212ENST00000518391 POLA1P09884 1462 aaPredicted RBP28.19■■■□□ 2.1
CDK16-212ENST00000518391 TRIM41Q8WV44 630 aa28.13■■■□□ 2.09
CDK16-212ENST00000518391 AQRO60306 1485 aaKnown RBP eCLIP28.09■■■□□ 2.099e-9■■■■■ 37.8
CDK16-212ENST00000518391 RAD54L2Q9Y4B4 1467 aa28.05■■■□□ 2.08
CDK16-212ENST00000518391 CUX1P39880 1505 aa28.04■■■□□ 2.08
CDK16-212ENST00000518391 FGD5Q6ZNL6 1462 aa28■■■□□ 2.07
CDK16-212ENST00000518391 RIMBP3CA6NJZ7 1639 aa28■■■□□ 2.07
CDK16-212ENST00000518391 RIMBP3BA6NNM3 1639 aa28■■■□□ 2.07
CDK16-212ENST00000518391 RIMBP3Q9UFD9 1639 aa28■■■□□ 2.07
CDK16-212ENST00000518391 SOGA1O94964 1423 aa27.99■■■□□ 2.07
CDK16-212ENST00000518391 CHD1O14646 1710 aa27.97■■■□□ 2.07
CDK16-212ENST00000518391 WDR97A6NE52 1622 aa27.95■■■□□ 2.06
CDK16-212ENST00000518391 ARHGEF11O15085 1522 aa27.92■■■□□ 2.06
CDK16-212ENST00000518391 TDRD9Q8NDG6 1382 aaKnown RBP27.92■■■□□ 2.06
CDK16-212ENST00000518391 SUPT5HO00267 1087 aaKnown RBP27.88■■■□□ 2.05
CDK16-212ENST00000518391 SNAPC4Q5SXM2 1469 aa27.81■■■□□ 2.04
CDK16-212ENST00000518391 GRIN2BQ13224 1484 aa27.76■■■□□ 2.04
CDK16-212ENST00000518391 MAGI1Q96QZ7 1491 aaPredicted RBP27.76■■■□□ 2.04
CDK16-212ENST00000518391 ABCA10Q8WWZ4 1543 aa27.72■■■□□ 2.03
CDK16-212ENST00000518391 FBLN2P98095 1184 aa27.72■■■□□ 2.03
CDK16-212ENST00000518391 CLASP1Q7Z460 1538 aa27.72■■■□□ 2.03
CDK16-212ENST00000518391 ABCA5Q8WWZ7 1642 aa27.7■■■□□ 2.02
CDK16-212ENST00000518391 ARAP1Q96P48 1450 aa27.68■■■□□ 2.02
CDK16-212ENST00000518391 PBRM1Q86U86 1689 aa27.68■■■□□ 2.02
CDK16-212ENST00000518391 SYNJ2O15056 1496 aa27.67■■■□□ 2.02
CDK16-212ENST00000518391 GAPVD1Q14C86 1478 aa27.67■■■□□ 2.02
CDK16-212ENST00000518391 BIVM-ERCC5R4GMW8 1640 aa27.63■■■□□ 2.01
CDK16-212ENST00000518391 TOP2BQ02880 1626 aa27.62■■■□□ 2.01
CDK16-212ENST00000518391 SYNJ1O43426 1573 aa27.61■■■□□ 2.01
CDK16-212ENST00000518391 CYB5RLQ6IPT4 315 aa27.59■■■□□ 2.01
CDK16-212ENST00000518391 CHMP7Q8WUX9 453 aaPredicted RBP27.59■■■□□ 2.01
CDK16-212ENST00000518391 WRNQ14191 1432 aaPredicted RBP eCLIP27.57■■■□□ 2
CDK16-212ENST00000518391 ADAMTS12P58397 1594 aa27.45■■□□□ 1.99
CDK16-212ENST00000518391 GRIN2AQ12879 1464 aa27.42■■□□□ 1.98
CDK16-212ENST00000518391 NUP160Q12769 1436 aa27.37■■□□□ 1.97
CDK16-212ENST00000518391 ERICH3Q5RHP9 1530 aa27.36■■□□□ 1.97
CDK16-212ENST00000518391 CEP170Q5SW79 1584 aa27.35■■□□□ 1.97
CDK16-212ENST00000518391 FHAD1B1AJZ9 1412 aa27.33■■□□□ 1.97
CDK16-212ENST00000518391 ERCC6L2Q5T890 1561 aa27.27■■□□□ 1.96
CDK16-212ENST00000518391 SHROOM2Q13796 1616 aa27.27■■□□□ 1.96
CDK16-212ENST00000518391 TRHP20396 242 aaPredicted RBP27.15■■□□□ 1.94
CDK16-212ENST00000518391 RUSC2Q8N2Y8 1516 aa27.07■■□□□ 1.92
CDK16-212ENST00000518391 IGF1RP08069 1367 aa27.05■■□□□ 1.92
CDK16-212ENST00000518391 PRG4Q92954 1404 aaPredicted RBP27.01■■□□□ 1.91
CDK16-212ENST00000518391 KIF27Q86VH2 1401 aa27■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms