RNA–Protein interactions for RNA: ENST00000518365.1

LGI3-204, Transcript of leucine rich repeat LGI family member 3, humanhuman

TSL 3

Gene LGI3, Length 784 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGI3-204ENST00000518365 NISCHQ9Y2I1 1504 aa62.55■■■■■ 7.6
LGI3-204ENST00000518365 ABCC9O60706 1549 aa57.17■■■■■ 6.74
LGI3-204ENST00000518365 CCDC180Q9P1Z9 1646 aa56.41■■■■■ 6.62
LGI3-204ENST00000518365 DNAJC5BQ9UF47 199 aa54.38■■■■■ 6.3
LGI3-204ENST00000518365 RB1CC1Q8TDY2 1594 aa53.98■■■■■ 6.23
LGI3-204ENST00000518365 NACADO15069 1562 aa53.43■■■■■ 6.14
LGI3-204ENST00000518365 PABPN1Q86U42 306 aaKnown RBP eCLIP53.14■■■■■ 6.1
LGI3-204ENST00000518365 DCAF8L2P0C7V8 631 aa53.1■■■■■ 6.09
LGI3-204ENST00000518365 UNC13AQ9UPW8 1703 aa53.09■■■■■ 6.09
LGI3-204ENST00000518365 BICRAQ9NZM4 1560 aa52.64■■■■■ 6.02
LGI3-204ENST00000518365 MYO15BQ96JP2 1530 aa52.4■■■■■ 5.98
LGI3-204ENST00000518365 ZCCHC6Q5VYS8 1495 aaKnown RBP51.68■■■■■ 5.86
LGI3-204ENST00000518365 CC2D2AQ9P2K1 1620 aa51.62■■■■■ 5.85
LGI3-204ENST00000518365 DCAF1Q9Y4B6 1507 aa51.52■■■■■ 5.84
LGI3-204ENST00000518365 SHROOM4Q9ULL8 1493 aa51.49■■■■■ 5.83
LGI3-204ENST00000518365 CECR2Q9BXF3 1484 aa51.48■■■■■ 5.83
LGI3-204ENST00000518365 SCRIBQ14160 1630 aa51.46■■■■■ 5.83
LGI3-204ENST00000518365 EIF4G1Q04637 1599 aaKnown RBP51.29■■■■■ 5.8
LGI3-204ENST00000518365 DNAJC5Q9H3Z4 198 aa50.23■■■■■ 5.63
LGI3-204ENST00000518365 CUX2O14529 1486 aa49.37■■■■■ 5.49
LGI3-204ENST00000518365 NCAPD3P42695 1498 aa49.36■■■■■ 5.49
LGI3-204ENST00000518365 ERCC6Q03468 1493 aa49.25■■■■■ 5.48
LGI3-204ENST00000518365 ATAD2BQ9ULI0 1458 aa49.17■■■■■ 5.46
LGI3-204ENST00000518365 NESP48681 1621 aa48.99■■■■■ 5.43
LGI3-204ENST00000518365 SMARCA4P51532 1647 aa48.98■■■■■ 5.43
LGI3-204ENST00000518365 HMGXB3Q12766 1538 aa48.91■■■■■ 5.42
LGI3-204ENST00000518365 SMARCA2P51531 1590 aa48.9■■■■■ 5.42
LGI3-204ENST00000518365 BAZ1BQ9UIG0 1483 aaKnown RBP48.6■■■■■ 5.37
LGI3-204ENST00000518365 THOC2Q8NI27 1593 aaKnown RBP48.58■■■■■ 5.37
LGI3-204ENST00000518365 BAZ1AQ9NRL2 1556 aaPredicted RBP48.52■■■■■ 5.36
LGI3-204ENST00000518365 PEG3Q9GZU2 1588 aa48.45■■■■■ 5.35
LGI3-204ENST00000518365 KIF21AQ7Z4S6 1674 aa48.37■■■■■ 5.33
LGI3-204ENST00000518365 LAMC3Q9Y6N6 1575 aa48.34■■■■■ 5.33
LGI3-204ENST00000518365 MROH2BQ7Z745 1585 aa48.29■■■■■ 5.32
LGI3-204ENST00000518365 PDS5BQ9NTI5 1447 aa48.01■■■■■ 5.28
LGI3-204ENST00000518365 CADPSQ9ULU8 1353 aa47.81■■■■■ 5.24
LGI3-204ENST00000518365 TRIM41Q8WV44 630 aa47.78■■■■■ 5.24
LGI3-204ENST00000518365 WIZO95785 1651 aa47.74■■■■■ 5.23
LGI3-204ENST00000518365 MRC2Q9UBG0 1479 aa47.72■■■■■ 5.23
LGI3-204ENST00000518365 WDR62O43379 1518 aa47.67■■■■■ 5.22
LGI3-204ENST00000518365 CEP164Q9UPV0 1460 aa47.38■■■■■ 5.17
LGI3-204ENST00000518365 FANCD2Q9BXW9 1451 aa47.31■■■■■ 5.16
LGI3-204ENST00000518365 CFTRP13569 1480 aa47.15■■■■■ 5.14
LGI3-204ENST00000518365 URB2Q14146 1524 aaKnown RBP47.05■■■■■ 5.12
LGI3-204ENST00000518365 OSCARQ8IYS5 282 aa47.02■■■■■ 5.12
LGI3-204ENST00000518365 RSF1Q96T23 1441 aaPredicted RBP46.96■■■■■ 5.11
LGI3-204ENST00000518365 TOP2AP11388 1531 aaKnown RBP46.91■■■■■ 5.1
LGI3-204ENST00000518365 PRDM2Q13029 1718 aa46.76■■■■■ 5.08
LGI3-204ENST00000518365 RIMBP3CA6NJZ7 1639 aa46.67■■■■■ 5.06
LGI3-204ENST00000518365 RIMBP3BA6NNM3 1639 aa46.67■■■■■ 5.06
LGI3-204ENST00000518365 RIMBP3Q9UFD9 1639 aa46.67■■■■■ 5.06
LGI3-204ENST00000518365 ZNF608Q9ULD9 1512 aaPredicted RBP46.62■■■■■ 5.05
LGI3-204ENST00000518365 CCDC88BA6NC98 1476 aa46.45■■■■■ 5.03
LGI3-204ENST00000518365 IFT140Q96RY7 1462 aa46.44■■■■■ 5.02
LGI3-204ENST00000518365 ARHGEF11O15085 1522 aa46.38■■■■■ 5.01
LGI3-204ENST00000518365 TOPBP1Q92547 1522 aa46.38■■■■■ 5.01
LGI3-204ENST00000518365 EIF4G3O43432 1585 aaKnown RBP46.28■■■■■ 5
LGI3-204ENST00000518365 CHD1O14646 1710 aa46.17■■■■■ 4.98
LGI3-204ENST00000518365 DNMBPQ6XZF7 1577 aa46.11■■■■■ 4.97
LGI3-204ENST00000518365 TARBP1Q13395 1621 aaKnown RBP46.08■■■■■ 4.97
LGI3-204ENST00000518365 AQRO60306 1485 aaKnown RBP eCLIP46.07■■■■■ 4.97
LGI3-204ENST00000518365 CYB5RLQ6IPT4 315 aa46.07■■■■■ 4.97
LGI3-204ENST00000518365 ABCC8Q09428 1581 aa46.05■■■■■ 4.96
LGI3-204ENST00000518365 ARAP1Q96P48 1450 aa45.91■■■■■ 4.94
LGI3-204ENST00000518365 POLA1P09884 1462 aaPredicted RBP45.86■■■■■ 4.93
LGI3-204ENST00000518365 FBLN2P98095 1184 aa45.81■■■■■ 4.92
LGI3-204ENST00000518365 RAD54L2Q9Y4B4 1467 aa45.78■■■■■ 4.92
LGI3-204ENST00000518365 TRHP20396 242 aaPredicted RBP45.71■■■■■ 4.91
LGI3-204ENST00000518365 TDRD9Q8NDG6 1382 aaKnown RBP45.66■■■■■ 4.9
LGI3-204ENST00000518365 SOGA1O94964 1423 aa45.59■■■■■ 4.89
LGI3-204ENST00000518365 SNAPC4Q5SXM2 1469 aa45.53■■■■■ 4.88
LGI3-204ENST00000518365 CLASP1Q7Z460 1538 aa45.51■■■■■ 4.88
LGI3-204ENST00000518365 FGD5Q6ZNL6 1462 aa45.49■■■■■ 4.87
LGI3-204ENST00000518365 CUX1P39880 1505 aa45.39■■■■■ 4.86
LGI3-204ENST00000518365 WDR97A6NE52 1622 aa45.34■■■■■ 4.85
LGI3-204ENST00000518365 SYNJ1O43426 1573 aa45.31■■■■■ 4.84
LGI3-204ENST00000518365 CHMP7Q8WUX9 453 aaPredicted RBP45.3■■■■■ 4.84
LGI3-204ENST00000518365 MAGI1Q96QZ7 1491 aaPredicted RBP45.28■■■■■ 4.84
LGI3-204ENST00000518365 GRIN2BQ13224 1484 aa45.23■■■■■ 4.83
LGI3-204ENST00000518365 PBRM1Q86U86 1689 aa45.18■■■■■ 4.82
LGI3-204ENST00000518365 SYNJ2O15056 1496 aa45.17■■■■■ 4.82
LGI3-204ENST00000518365 GAPVD1Q14C86 1478 aa45.02■■■■■ 4.8
LGI3-204ENST00000518365 ABCA5Q8WWZ7 1642 aa44.95■■■■■ 4.79
LGI3-204ENST00000518365 ERCC6L2Q5T890 1561 aa44.9■■■■■ 4.78
LGI3-204ENST00000518365 ABCA10Q8WWZ4 1543 aa44.87■■■■■ 4.77
LGI3-204ENST00000518365 AEBP2Q6ZN18 517 aaPredicted RBP44.79■■■■■ 4.76
LGI3-204ENST00000518365 GRIN2AQ12879 1464 aa44.7■■■■■ 4.75
LGI3-204ENST00000518365 CEP170Q5SW79 1584 aa44.68■■■■■ 4.74
LGI3-204ENST00000518365 ADAMTS12P58397 1594 aa44.64■■■■■ 4.74
LGI3-204ENST00000518365 NUP160Q12769 1436 aa44.58■■■■■ 4.73
LGI3-204ENST00000518365 SHROOM2Q13796 1616 aa44.53■■■■■ 4.72
LGI3-204ENST00000518365 WRNQ14191 1432 aaPredicted RBP eCLIP44.48■■■■■ 4.71
LGI3-204ENST00000518365 BIVM-ERCC5R4GMW8 1640 aa44.46■■■■■ 4.71
LGI3-204ENST00000518365 KIF13AQ9H1H9 1805 aa44.45■■■■■ 4.71
LGI3-204ENST00000518365 TOP2BQ02880 1626 aa44.41■■■■■ 4.7
LGI3-204ENST00000518365 SUPT5HO00267 1087 aaKnown RBP44.39■■■■■ 4.7
LGI3-204ENST00000518365 FHAD1B1AJZ9 1412 aa44.37■■■■■ 4.69
LGI3-204ENST00000518365 ERICH3Q5RHP9 1530 aa44.26■■■■■ 4.68
LGI3-204ENST00000518365 PRG4Q92954 1404 aaPredicted RBP44.2■■■■■ 4.67
LGI3-204ENST00000518365 JPH4Q96JJ6 628 aa44.1■■■■■ 4.65
Retrieved 100 of 20,778 RNA–protein pairs in 113.4 ms