RNA–Protein interactions for RNA: ENST00000518317.5

RUNX1T1-210, Transcript of RUNX1 translocation partner 1, humanhuman

TSL 4

Gene RUNX1T1, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1T1-210ENST00000518317 NISCHQ9Y2I1 1504 aa29.5■■■□□ 2.31
RUNX1T1-210ENST00000518317 CCDC180Q9P1Z9 1646 aa26.29■■□□□ 1.8
RUNX1T1-210ENST00000518317 ABCC9O60706 1549 aa25.88■■□□□ 1.73
RUNX1T1-210ENST00000518317 RB1CC1Q8TDY2 1594 aa24.84■■□□□ 1.57
RUNX1T1-210ENST00000518317 NACADO15069 1562 aa24.77■■□□□ 1.56
RUNX1T1-210ENST00000518317 DCAF8L2P0C7V8 631 aa24.76■■□□□ 1.55
RUNX1T1-210ENST00000518317 MYO15BQ96JP2 1530 aa24.56■■□□□ 1.52
RUNX1T1-210ENST00000518317 ZCCHC6Q5VYS8 1495 aaKnown RBP24.51■■□□□ 1.51
RUNX1T1-210ENST00000518317 DCAF1Q9Y4B6 1507 aa24.39■■□□□ 1.49
RUNX1T1-210ENST00000518317 UNC13AQ9UPW8 1703 aa24.29■■□□□ 1.48
RUNX1T1-210ENST00000518317 PABPN1Q86U42 306 aaKnown RBP eCLIP24.19■■□□□ 1.46
RUNX1T1-210ENST00000518317 BICRAQ9NZM4 1560 aa24.08■■□□□ 1.45
RUNX1T1-210ENST00000518317 SCRIBQ14160 1630 aa23.96■■□□□ 1.43
RUNX1T1-210ENST00000518317 DNAJC5BQ9UF47 199 aa23.95■■□□□ 1.42
RUNX1T1-210ENST00000518317 SHROOM4Q9ULL8 1493 aa23.8■■□□□ 1.4
RUNX1T1-210ENST00000518317 EIF4G1Q04637 1599 aaKnown RBP23.46■■□□□ 1.35
RUNX1T1-210ENST00000518317 CC2D2AQ9P2K1 1620 aa23.41■■□□□ 1.34
RUNX1T1-210ENST00000518317 CECR2Q9BXF3 1484 aa23.28■■□□□ 1.32
RUNX1T1-210ENST00000518317 SMARCA4P51532 1647 aa22.91■■□□□ 1.26
RUNX1T1-210ENST00000518317 BAZ1AQ9NRL2 1556 aaPredicted RBP22.87■■□□□ 1.25
RUNX1T1-210ENST00000518317 NCAPD3P42695 1498 aa22.86■■□□□ 1.25
RUNX1T1-210ENST00000518317 ATAD2BQ9ULI0 1458 aa22.84■■□□□ 1.25
RUNX1T1-210ENST00000518317 SMARCA2P51531 1590 aa22.8■■□□□ 1.24
RUNX1T1-210ENST00000518317 MROH2BQ7Z745 1585 aa22.72■■□□□ 1.23
RUNX1T1-210ENST00000518317 HMGXB3Q12766 1538 aa22.71■■□□□ 1.23
RUNX1T1-210ENST00000518317 PEG3Q9GZU2 1588 aa22.69■■□□□ 1.22
RUNX1T1-210ENST00000518317 BAZ1BQ9UIG0 1483 aaKnown RBP22.63■■□□□ 1.21
RUNX1T1-210ENST00000518317 WIZO95785 1651 aa22.49■■□□□ 1.19
RUNX1T1-210ENST00000518317 RSF1Q96T23 1441 aaPredicted RBP22.4■■□□□ 1.18
RUNX1T1-210ENST00000518317 NESP48681 1621 aa22.35■■□□□ 1.17
RUNX1T1-210ENST00000518317 ERCC6Q03468 1493 aa22.32■■□□□ 1.16
RUNX1T1-210ENST00000518317 LAMC3Q9Y6N6 1575 aa22.29■■□□□ 1.16
RUNX1T1-210ENST00000518317 TOP2AP11388 1531 aaKnown RBP22.21■■□□□ 1.15
RUNX1T1-210ENST00000518317 CADPSQ9ULU8 1353 aa22.19■■□□□ 1.14
RUNX1T1-210ENST00000518317 PDS5BQ9NTI5 1447 aa22.15■■□□□ 1.14
RUNX1T1-210ENST00000518317 CUX2O14529 1486 aa22.15■■□□□ 1.14
RUNX1T1-210ENST00000518317 KIF21AQ7Z4S6 1674 aa22.09■■□□□ 1.13
RUNX1T1-210ENST00000518317 THOC2Q8NI27 1593 aaKnown RBP22.04■■□□□ 1.12
RUNX1T1-210ENST00000518317 CFTRP13569 1480 aa22.02■■□□□ 1.12
RUNX1T1-210ENST00000518317 CCDC88BA6NC98 1476 aa21.98■■□□□ 1.11
RUNX1T1-210ENST00000518317 FANCD2Q9BXW9 1451 aa21.91■■□□□ 1.1
RUNX1T1-210ENST00000518317 MRC2Q9UBG0 1479 aa21.9■■□□□ 1.1
RUNX1T1-210ENST00000518317 CEP164Q9UPV0 1460 aa21.9■■□□□ 1.1
RUNX1T1-210ENST00000518317 PRDM2Q13029 1718 aa21.84■■□□□ 1.09
RUNX1T1-210ENST00000518317 WDR62O43379 1518 aa21.84■■□□□ 1.09
RUNX1T1-210ENST00000518317 SUPT5HO00267 1087 aaKnown RBP21.74■■□□□ 1.07
RUNX1T1-210ENST00000518317 DNAJC5Q9H3Z4 198 aa21.72■■□□□ 1.07
RUNX1T1-210ENST00000518317 URB2Q14146 1524 aaKnown RBP21.7■■□□□ 1.07
RUNX1T1-210ENST00000518317 ABCC8Q09428 1581 aa21.57■■□□□ 1.04
RUNX1T1-210ENST00000518317 TOPBP1Q92547 1522 aa21.55■■□□□ 1.04
RUNX1T1-210ENST00000518317 DNMBPQ6XZF7 1577 aa21.51■■□□□ 1.03
RUNX1T1-210ENST00000518317 IFT140Q96RY7 1462 aa21.45■■□□□ 1.03
RUNX1T1-210ENST00000518317 ZNF608Q9ULD9 1512 aaPredicted RBP21.37■■□□□ 1.01
RUNX1T1-210ENST00000518317 POLA1P09884 1462 aaPredicted RBP21.35■■□□□ 1.01
RUNX1T1-210ENST00000518317 TARBP1Q13395 1621 aaKnown RBP21.33■■□□□ 1.01
RUNX1T1-210ENST00000518317 CUX1P39880 1505 aa21.32■■□□□ 1
RUNX1T1-210ENST00000518317 SOGA1O94964 1423 aa21.29■■□□□ 1
RUNX1T1-210ENST00000518317 FGD5Q6ZNL6 1462 aa21.27■■□□□ 1
RUNX1T1-210ENST00000518317 RAD54L2Q9Y4B4 1467 aa21.27■■□□□ 1
RUNX1T1-210ENST00000518317 EIF4G3O43432 1585 aaKnown RBP21.27■□□□□ 0.99
RUNX1T1-210ENST00000518317 OSCARQ8IYS5 282 aa21.26■□□□□ 0.99
RUNX1T1-210ENST00000518317 AQRO60306 1485 aaKnown RBP eCLIP21.25■□□□□ 0.99
RUNX1T1-210ENST00000518317 TDRD9Q8NDG6 1382 aaKnown RBP21.18■□□□□ 0.98
RUNX1T1-210ENST00000518317 WDR97A6NE52 1622 aa21.15■□□□□ 0.98
RUNX1T1-210ENST00000518317 WRNQ14191 1432 aaPredicted RBP eCLIP21.12■□□□□ 0.97
RUNX1T1-210ENST00000518317 TOP2BQ02880 1626 aa21.1■□□□□ 0.97
RUNX1T1-210ENST00000518317 BIVM-ERCC5R4GMW8 1640 aa21.1■□□□□ 0.97
RUNX1T1-210ENST00000518317 SYNJ1O43426 1573 aa21.07■□□□□ 0.96
RUNX1T1-210ENST00000518317 ABCA10Q8WWZ4 1543 aa21.07■□□□□ 0.96
RUNX1T1-210ENST00000518317 CHD1O14646 1710 aa21.05■□□□□ 0.96
RUNX1T1-210ENST00000518317 FBLN2P98095 1184 aa21.05■□□□□ 0.96
RUNX1T1-210ENST00000518317 GRIN2BQ13224 1484 aa21.04■□□□□ 0.96
RUNX1T1-210ENST00000518317 GAPVD1Q14C86 1478 aa21.03■□□□□ 0.96
RUNX1T1-210ENST00000518317 SNAPC4Q5SXM2 1469 aa21.02■□□□□ 0.96
RUNX1T1-210ENST00000518317 MAGI1Q96QZ7 1491 aaPredicted RBP21■□□□□ 0.95
RUNX1T1-210ENST00000518317 PBRM1Q86U86 1689 aa20.99■□□□□ 0.95
RUNX1T1-210ENST00000518317 ABCA5Q8WWZ7 1642 aa20.98■□□□□ 0.95
RUNX1T1-210ENST00000518317 CHMP7Q8WUX9 453 aaPredicted RBP20.97■□□□□ 0.95
RUNX1T1-210ENST00000518317 SYNJ2O15056 1496 aa20.92■□□□□ 0.94
RUNX1T1-210ENST00000518317 TRIM41Q8WV44 630 aa20.91■□□□□ 0.94
RUNX1T1-210ENST00000518317 RIMBP3CA6NJZ7 1639 aa20.89■□□□□ 0.93
RUNX1T1-210ENST00000518317 RIMBP3BA6NNM3 1639 aa20.89■□□□□ 0.93
RUNX1T1-210ENST00000518317 RIMBP3Q9UFD9 1639 aa20.89■□□□□ 0.93
RUNX1T1-210ENST00000518317 ARHGEF11O15085 1522 aa20.85■□□□□ 0.93
RUNX1T1-210ENST00000518317 ERICH3Q5RHP9 1530 aa20.82■□□□□ 0.92
RUNX1T1-210ENST00000518317 CLASP1Q7Z460 1538 aa20.8■□□□□ 0.92
RUNX1T1-210ENST00000518317 ADAMTS12P58397 1594 aa20.79■□□□□ 0.92
RUNX1T1-210ENST00000518317 FHAD1B1AJZ9 1412 aa20.78■□□□□ 0.92
RUNX1T1-210ENST00000518317 GRIN2AQ12879 1464 aa20.76■□□□□ 0.91
RUNX1T1-210ENST00000518317 CYB5RLQ6IPT4 315 aa20.72■□□□□ 0.91
RUNX1T1-210ENST00000518317 KIF27Q86VH2 1401 aa20.71■□□□□ 0.91
RUNX1T1-210ENST00000518317 NUP160Q12769 1436 aa20.68■□□□□ 0.9
RUNX1T1-210ENST00000518317 ARAP1Q96P48 1450 aa20.68■□□□□ 0.9
RUNX1T1-210ENST00000518317 CEP170Q5SW79 1584 aa20.67■□□□□ 0.9
RUNX1T1-210ENST00000518317 IGF1RP08069 1367 aa20.66■□□□□ 0.9
RUNX1T1-210ENST00000518317 CUL7Q14999 1698 aa20.59■□□□□ 0.89
RUNX1T1-210ENST00000518317 SHROOM2Q13796 1616 aa20.55■□□□□ 0.88
RUNX1T1-210ENST00000518317 CARMIL1Q5VZK9 1371 aa20.53■□□□□ 0.88
RUNX1T1-210ENST00000518317 JPH4Q96JJ6 628 aa20.52■□□□□ 0.88
RUNX1T1-210ENST00000518317 ERCC6L2Q5T890 1561 aa20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms