RNA–Protein interactions for RNA: ENST00000518224.1

IGHV3-25-201, Transcript of immunoglobulin heavy variable 3-25 (pseudogene), humanhuman

BASIC

Gene IGHV3-25, Length 351 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-25-201ENST00000518224 NISCHQ9Y2I1 1504 aa28.06■■■□□ 2.08
IGHV3-25-201ENST00000518224 CCDC180Q9P1Z9 1646 aa25.03■■□□□ 1.6
IGHV3-25-201ENST00000518224 ABCC9O60706 1549 aa24.53■■□□□ 1.52
IGHV3-25-201ENST00000518224 RB1CC1Q8TDY2 1594 aa23.59■■□□□ 1.37
IGHV3-25-201ENST00000518224 NACADO15069 1562 aa23.57■■□□□ 1.36
IGHV3-25-201ENST00000518224 MYO15BQ96JP2 1530 aa23.48■■□□□ 1.35
IGHV3-25-201ENST00000518224 ZCCHC6Q5VYS8 1495 aaKnown RBP23.36■■□□□ 1.33
IGHV3-25-201ENST00000518224 DCAF1Q9Y4B6 1507 aa23.29■■□□□ 1.32
IGHV3-25-201ENST00000518224 DCAF8L2P0C7V8 631 aa23.26■■□□□ 1.31
IGHV3-25-201ENST00000518224 UNC13AQ9UPW8 1703 aa23.05■■□□□ 1.28
IGHV3-25-201ENST00000518224 BICRAQ9NZM4 1560 aa22.94■■□□□ 1.26
IGHV3-25-201ENST00000518224 PABPN1Q86U42 306 aaKnown RBP eCLIP22.86■■□□□ 1.25
IGHV3-25-201ENST00000518224 SHROOM4Q9ULL8 1493 aa22.75■■□□□ 1.23
IGHV3-25-201ENST00000518224 DNAJC5BQ9UF47 199 aa22.73■■□□□ 1.23
IGHV3-25-201ENST00000518224 SCRIBQ14160 1630 aa22.71■■□□□ 1.23
IGHV3-25-201ENST00000518224 EIF4G1Q04637 1599 aaKnown RBP22.3■■□□□ 1.16
IGHV3-25-201ENST00000518224 CC2D2AQ9P2K1 1620 aa22.24■■□□□ 1.15
IGHV3-25-201ENST00000518224 CECR2Q9BXF3 1484 aa22.09■■□□□ 1.13
IGHV3-25-201ENST00000518224 NCAPD3P42695 1498 aa21.78■■□□□ 1.08
IGHV3-25-201ENST00000518224 SMARCA4P51532 1647 aa21.78■■□□□ 1.08
IGHV3-25-201ENST00000518224 BAZ1AQ9NRL2 1556 aaPredicted RBP21.74■■□□□ 1.07
IGHV3-25-201ENST00000518224 ATAD2BQ9ULI0 1458 aa21.73■■□□□ 1.07
IGHV3-25-201ENST00000518224 SMARCA2P51531 1590 aa21.68■■□□□ 1.06
IGHV3-25-201ENST00000518224 PEG3Q9GZU2 1588 aa21.66■■□□□ 1.06
IGHV3-25-201ENST00000518224 HMGXB3Q12766 1538 aa21.65■■□□□ 1.06
IGHV3-25-201ENST00000518224 MROH2BQ7Z745 1585 aa21.59■■□□□ 1.05
IGHV3-25-201ENST00000518224 BAZ1BQ9UIG0 1483 aaKnown RBP21.48■■□□□ 1.03
IGHV3-25-201ENST00000518224 RSF1Q96T23 1441 aaPredicted RBP21.31■■□□□ 1
IGHV3-25-201ENST00000518224 WIZO95785 1651 aa21.31■■□□□ 1
IGHV3-25-201ENST00000518224 NESP48681 1621 aa21.21■□□□□ 0.99
IGHV3-25-201ENST00000518224 LAMC3Q9Y6N6 1575 aa21.19■□□□□ 0.98
IGHV3-25-201ENST00000518224 ERCC6Q03468 1493 aa21.13■□□□□ 0.97
IGHV3-25-201ENST00000518224 TOP2AP11388 1531 aaKnown RBP21.12■□□□□ 0.97
IGHV3-25-201ENST00000518224 CADPSQ9ULU8 1353 aa21.09■□□□□ 0.97
IGHV3-25-201ENST00000518224 CUX2O14529 1486 aa21.08■□□□□ 0.97
IGHV3-25-201ENST00000518224 PDS5BQ9NTI5 1447 aa21.03■□□□□ 0.96
IGHV3-25-201ENST00000518224 THOC2Q8NI27 1593 aaKnown RBP20.97■□□□□ 0.95
IGHV3-25-201ENST00000518224 CFTRP13569 1480 aa20.96■□□□□ 0.95
IGHV3-25-201ENST00000518224 KIF21AQ7Z4S6 1674 aa20.94■□□□□ 0.94
IGHV3-25-201ENST00000518224 CCDC88BA6NC98 1476 aa20.87■□□□□ 0.93
IGHV3-25-201ENST00000518224 FANCD2Q9BXW9 1451 aa20.81■□□□□ 0.92
IGHV3-25-201ENST00000518224 MRC2Q9UBG0 1479 aa20.81■□□□□ 0.92
IGHV3-25-201ENST00000518224 CEP164Q9UPV0 1460 aa20.8■□□□□ 0.92
IGHV3-25-201ENST00000518224 WDR62O43379 1518 aa20.79■□□□□ 0.92
IGHV3-25-201ENST00000518224 PRDM2Q13029 1718 aa20.74■□□□□ 0.91
IGHV3-25-201ENST00000518224 URB2Q14146 1524 aaKnown RBP20.64■□□□□ 0.9
IGHV3-25-201ENST00000518224 DNAJC5Q9H3Z4 198 aa20.61■□□□□ 0.89
IGHV3-25-201ENST00000518224 ABCC8Q09428 1581 aa20.49■□□□□ 0.87
IGHV3-25-201ENST00000518224 TOPBP1Q92547 1522 aa20.48■□□□□ 0.87
IGHV3-25-201ENST00000518224 SUPT5HO00267 1087 aaKnown RBP20.46■□□□□ 0.87
IGHV3-25-201ENST00000518224 DNMBPQ6XZF7 1577 aa20.44■□□□□ 0.86
IGHV3-25-201ENST00000518224 IFT140Q96RY7 1462 aa20.39■□□□□ 0.85
IGHV3-25-201ENST00000518224 ZNF608Q9ULD9 1512 aaPredicted RBP20.3■□□□□ 0.84
IGHV3-25-201ENST00000518224 TARBP1Q13395 1621 aaKnown RBP20.3■□□□□ 0.84
IGHV3-25-201ENST00000518224 POLA1P09884 1462 aaPredicted RBP20.3■□□□□ 0.84
IGHV3-25-201ENST00000518224 CUX1P39880 1505 aa20.27■□□□□ 0.84
IGHV3-25-201ENST00000518224 EIF4G3O43432 1585 aaKnown RBP20.2■□□□□ 0.82
IGHV3-25-201ENST00000518224 FGD5Q6ZNL6 1462 aa20.19■□□□□ 0.82
IGHV3-25-201ENST00000518224 SOGA1O94964 1423 aa20.18■□□□□ 0.82
IGHV3-25-201ENST00000518224 RAD54L2Q9Y4B4 1467 aa20.17■□□□□ 0.82
IGHV3-25-201ENST00000518224 WDR97A6NE52 1622 aa20.16■□□□□ 0.82
IGHV3-25-201ENST00000518224 AQRO60306 1485 aaKnown RBP eCLIP20.14■□□□□ 0.81
IGHV3-25-201ENST00000518224 OSCARQ8IYS5 282 aa20.11■□□□□ 0.81
IGHV3-25-201ENST00000518224 TDRD9Q8NDG6 1382 aaKnown RBP20.07■□□□□ 0.8
IGHV3-25-201ENST00000518224 BIVM-ERCC5R4GMW8 1640 aa20.06■□□□□ 0.8
IGHV3-25-201ENST00000518224 TOP2BQ02880 1626 aa20.05■□□□□ 0.8
IGHV3-25-201ENST00000518224 WRNQ14191 1432 aaPredicted RBP eCLIP20.05■□□□□ 0.8
IGHV3-25-201ENST00000518224 ABCA10Q8WWZ4 1543 aa20.05■□□□□ 0.8
IGHV3-25-201ENST00000518224 SYNJ1O43426 1573 aa20.01■□□□□ 0.79
IGHV3-25-201ENST00000518224 GRIN2BQ13224 1484 aa19.99■□□□□ 0.79
IGHV3-25-201ENST00000518224 MAGI1Q96QZ7 1491 aaPredicted RBP19.98■□□□□ 0.79
IGHV3-25-201ENST00000518224 ABCA5Q8WWZ7 1642 aa19.98■□□□□ 0.79
IGHV3-25-201ENST00000518224 GAPVD1Q14C86 1478 aa19.95■□□□□ 0.78
IGHV3-25-201ENST00000518224 SNAPC4Q5SXM2 1469 aa19.95■□□□□ 0.78
IGHV3-25-201ENST00000518224 CHD1O14646 1710 aa19.95■□□□□ 0.78
IGHV3-25-201ENST00000518224 PBRM1Q86U86 1689 aa19.89■□□□□ 0.77
IGHV3-25-201ENST00000518224 SYNJ2O15056 1496 aa19.88■□□□□ 0.77
IGHV3-25-201ENST00000518224 CLASP1Q7Z460 1538 aa19.82■□□□□ 0.76
IGHV3-25-201ENST00000518224 RIMBP3CA6NJZ7 1639 aa19.82■□□□□ 0.76
IGHV3-25-201ENST00000518224 RIMBP3BA6NNM3 1639 aa19.82■□□□□ 0.76
IGHV3-25-201ENST00000518224 RIMBP3Q9UFD9 1639 aa19.82■□□□□ 0.76
IGHV3-25-201ENST00000518224 ARHGEF11O15085 1522 aa19.81■□□□□ 0.76
IGHV3-25-201ENST00000518224 FBLN2P98095 1184 aa19.81■□□□□ 0.76
IGHV3-25-201ENST00000518224 ERICH3Q5RHP9 1530 aa19.81■□□□□ 0.76
IGHV3-25-201ENST00000518224 CHMP7Q8WUX9 453 aaPredicted RBP19.8■□□□□ 0.76
IGHV3-25-201ENST00000518224 ADAMTS12P58397 1594 aa19.78■□□□□ 0.76
IGHV3-25-201ENST00000518224 FHAD1B1AJZ9 1412 aa19.74■□□□□ 0.75
IGHV3-25-201ENST00000518224 GRIN2AQ12879 1464 aa19.73■□□□□ 0.75
IGHV3-25-201ENST00000518224 NUP160Q12769 1436 aa19.7■□□□□ 0.74
IGHV3-25-201ENST00000518224 TRIM41Q8WV44 630 aa19.68■□□□□ 0.74
IGHV3-25-201ENST00000518224 ARAP1Q96P48 1450 aa19.66■□□□□ 0.74
IGHV3-25-201ENST00000518224 KIF27Q86VH2 1401 aa19.64■□□□□ 0.73
IGHV3-25-201ENST00000518224 CEP170Q5SW79 1584 aa19.63■□□□□ 0.73
IGHV3-25-201ENST00000518224 IGF1RP08069 1367 aa19.63■□□□□ 0.73
IGHV3-25-201ENST00000518224 SHROOM2Q13796 1616 aa19.57■□□□□ 0.72
IGHV3-25-201ENST00000518224 CYB5RLQ6IPT4 315 aa19.56■□□□□ 0.72
IGHV3-25-201ENST00000518224 CUL7Q14999 1698 aa19.56■□□□□ 0.72
IGHV3-25-201ENST00000518224 RUSC2Q8N2Y8 1516 aa19.49■□□□□ 0.71
IGHV3-25-201ENST00000518224 ERCC6L2Q5T890 1561 aa19.47■□□□□ 0.71
IGHV3-25-201ENST00000518224 CARMIL1Q5VZK9 1371 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms