RNA–Protein interactions for RNA: ENST00000518211.1

RB1CC1-204, Transcript of RB1 inducible coiled-coil 1, humanhuman

TSL 5

Gene RB1CC1, Length 891 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RB1CC1-204ENST00000518211 NISCHQ9Y2I1 1504 aa46.23■■■■■ 4.99
RB1CC1-204ENST00000518211 ABCC9O60706 1549 aa42.42■■■■■ 4.38
RB1CC1-204ENST00000518211 CCDC180Q9P1Z9 1646 aa41.77■■■■■ 4.28
RB1CC1-204ENST00000518211 DNAJC5BQ9UF47 199 aa40.39■■■■■ 4.06
RB1CC1-204ENST00000518211 RB1CC1Q8TDY2 1594 aa40■■■■□ 3.99
RB1CC1-204ENST00000518211 NACADO15069 1562 aa39.55■■■■□ 3.92
RB1CC1-204ENST00000518211 UNC13AQ9UPW8 1703 aa39.4■■■■□ 3.9
RB1CC1-204ENST00000518211 PABPN1Q86U42 306 aaKnown RBP eCLIP39.38■■■■□ 3.89
RB1CC1-204ENST00000518211 DCAF8L2P0C7V8 631 aa39.27■■■■□ 3.88
RB1CC1-204ENST00000518211 BICRAQ9NZM4 1560 aa39.03■■■■□ 3.84
RB1CC1-204ENST00000518211 MYO15BQ96JP2 1530 aa38.72■■■■□ 3.79
RB1CC1-204ENST00000518211 CC2D2AQ9P2K1 1620 aa38.3■■■■□ 3.72
RB1CC1-204ENST00000518211 ZCCHC6Q5VYS8 1495 aaKnown RBP38.2■■■■□ 3.71
RB1CC1-204ENST00000518211 CECR2Q9BXF3 1484 aa38.2■■■■□ 3.71
RB1CC1-204ENST00000518211 SCRIBQ14160 1630 aa38.13■■■■□ 3.69
RB1CC1-204ENST00000518211 SHROOM4Q9ULL8 1493 aa38.12■■■■□ 3.69
RB1CC1-204ENST00000518211 DCAF1Q9Y4B6 1507 aa38.05■■■■□ 3.68
RB1CC1-204ENST00000518211 EIF4G1Q04637 1599 aaKnown RBP38.03■■■■□ 3.68
RB1CC1-204ENST00000518211 DNAJC5Q9H3Z4 198 aa37.35■■■■□ 3.57
RB1CC1-204ENST00000518211 CUX2O14529 1486 aa36.65■■■■□ 3.46
RB1CC1-204ENST00000518211 ERCC6Q03468 1493 aa36.56■■■■□ 3.44
RB1CC1-204ENST00000518211 NCAPD3P42695 1498 aa36.5■■■■□ 3.43
RB1CC1-204ENST00000518211 ATAD2BQ9ULI0 1458 aa36.37■■■■□ 3.41
RB1CC1-204ENST00000518211 NESP48681 1621 aa36.34■■■■□ 3.41
RB1CC1-204ENST00000518211 SMARCA4P51532 1647 aa36.26■■■■□ 3.39
RB1CC1-204ENST00000518211 HMGXB3Q12766 1538 aa36.22■■■■□ 3.39
RB1CC1-204ENST00000518211 SMARCA2P51531 1590 aa36.18■■■■□ 3.38
RB1CC1-204ENST00000518211 THOC2Q8NI27 1593 aaKnown RBP36.07■■■■□ 3.37
RB1CC1-204ENST00000518211 BAZ1BQ9UIG0 1483 aaKnown RBP35.97■■■■□ 3.35
RB1CC1-204ENST00000518211 KIF21AQ7Z4S6 1674 aa35.91■■■■□ 3.34
RB1CC1-204ENST00000518211 BAZ1AQ9NRL2 1556 aaPredicted RBP35.88■■■■□ 3.33
RB1CC1-204ENST00000518211 PEG3Q9GZU2 1588 aa35.83■■■■□ 3.33
RB1CC1-204ENST00000518211 LAMC3Q9Y6N6 1575 aa35.81■■■■□ 3.32
RB1CC1-204ENST00000518211 MROH2BQ7Z745 1585 aa35.71■■■■□ 3.31
RB1CC1-204ENST00000518211 TRIM41Q8WV44 630 aa35.55■■■■□ 3.28
RB1CC1-204ENST00000518211 PDS5BQ9NTI5 1447 aa35.53■■■■□ 3.28
RB1CC1-204ENST00000518211 MRC2Q9UBG0 1479 aa35.37■■■■□ 3.25
RB1CC1-204ENST00000518211 CADPSQ9ULU8 1353 aa35.37■■■■□ 3.25
RB1CC1-204ENST00000518211 WDR62O43379 1518 aa35.34■■■■□ 3.25
RB1CC1-204ENST00000518211 WIZO95785 1651 aa35.32■■■■□ 3.24
RB1CC1-204ENST00000518211 CEP164Q9UPV0 1460 aa35.09■■■■□ 3.21
RB1CC1-204ENST00000518211 FANCD2Q9BXW9 1451 aa35.03■■■■□ 3.2
RB1CC1-204ENST00000518211 CFTRP13569 1480 aa34.87■■■■□ 3.17
RB1CC1-204ENST00000518211 URB2Q14146 1524 aaKnown RBP34.86■■■■□ 3.17
RB1CC1-204ENST00000518211 OSCARQ8IYS5 282 aa34.84■■■■□ 3.17
RB1CC1-204ENST00000518211 TOP2AP11388 1531 aaKnown RBP34.69■■■■□ 3.14
RB1CC1-204ENST00000518211 RIMBP3CA6NJZ7 1639 aa34.68■■■■□ 3.14
RB1CC1-204ENST00000518211 RIMBP3BA6NNM3 1639 aa34.68■■■■□ 3.14
RB1CC1-204ENST00000518211 RIMBP3Q9UFD9 1639 aa34.68■■■■□ 3.14
RB1CC1-204ENST00000518211 RSF1Q96T23 1441 aaPredicted RBP34.66■■■■□ 3.14
RB1CC1-204ENST00000518211 PRDM2Q13029 1718 aa34.65■■■■□ 3.14
RB1CC1-204ENST00000518211 ZNF608Q9ULD9 1512 aaPredicted RBP34.55■■■■□ 3.12
RB1CC1-204ENST00000518211 ARHGEF11O15085 1522 aa34.44■■■■□ 3.1
RB1CC1-204ENST00000518211 IFT140Q96RY7 1462 aa34.38■■■■□ 3.09
RB1CC1-204ENST00000518211 EIF4G3O43432 1585 aaKnown RBP34.33■■■■□ 3.09
RB1CC1-204ENST00000518211 TOPBP1Q92547 1522 aa34.33■■■■□ 3.09
RB1CC1-204ENST00000518211 CCDC88BA6NC98 1476 aa34.32■■■■□ 3.08
RB1CC1-204ENST00000518211 CHD1O14646 1710 aa34.28■■■■□ 3.08
RB1CC1-204ENST00000518211 CYB5RLQ6IPT4 315 aa34.16■■■■□ 3.06
RB1CC1-204ENST00000518211 DNMBPQ6XZF7 1577 aa34.14■■■■□ 3.06
RB1CC1-204ENST00000518211 TARBP1Q13395 1621 aaKnown RBP34.13■■■■□ 3.05
RB1CC1-204ENST00000518211 AQRO60306 1485 aaKnown RBP eCLIP34.12■■■■□ 3.05
RB1CC1-204ENST00000518211 ARAP1Q96P48 1450 aa34.09■■■■□ 3.05
RB1CC1-204ENST00000518211 ABCC8Q09428 1581 aa34.03■■■■□ 3.04
RB1CC1-204ENST00000518211 TRHP20396 242 aaPredicted RBP33.95■■■■□ 3.03
RB1CC1-204ENST00000518211 POLA1P09884 1462 aaPredicted RBP33.94■■■■□ 3.02
RB1CC1-204ENST00000518211 FBLN2P98095 1184 aa33.93■■■■□ 3.02
RB1CC1-204ENST00000518211 RAD54L2Q9Y4B4 1467 aa33.89■■■■□ 3.02
RB1CC1-204ENST00000518211 TDRD9Q8NDG6 1382 aaKnown RBP33.79■■■■□ 3
RB1CC1-204ENST00000518211 CLASP1Q7Z460 1538 aa33.74■■■□□ 2.99
RB1CC1-204ENST00000518211 SNAPC4Q5SXM2 1469 aa33.74■■■□□ 2.99
RB1CC1-204ENST00000518211 SOGA1O94964 1423 aa33.7■■■□□ 2.99
RB1CC1-204ENST00000518211 FGD5Q6ZNL6 1462 aa33.66■■■□□ 2.98
RB1CC1-204ENST00000518211 SYNJ1O43426 1573 aa33.59■■■□□ 2.97
RB1CC1-204ENST00000518211 CUX1P39880 1505 aa33.58■■■□□ 2.97
RB1CC1-204ENST00000518211 WDR97A6NE52 1622 aa33.55■■■□□ 2.96
RB1CC1-204ENST00000518211 MAGI1Q96QZ7 1491 aaPredicted RBP33.52■■■□□ 2.96
RB1CC1-204ENST00000518211 CHMP7Q8WUX9 453 aaPredicted RBP33.52■■■□□ 2.96
RB1CC1-204ENST00000518211 PBRM1Q86U86 1689 aa33.5■■■□□ 2.95
RB1CC1-204ENST00000518211 GRIN2BQ13224 1484 aa33.47■■■□□ 2.95
RB1CC1-204ENST00000518211 SYNJ2O15056 1496 aa33.44■■■□□ 2.94
RB1CC1-204ENST00000518211 GAPVD1Q14C86 1478 aa33.37■■■□□ 2.93
RB1CC1-204ENST00000518211 AEBP2Q6ZN18 517 aaPredicted RBP33.33■■■□□ 2.93
RB1CC1-204ENST00000518211 ERCC6L2Q5T890 1561 aa33.31■■■□□ 2.92
RB1CC1-204ENST00000518211 ABCA5Q8WWZ7 1642 aa33.28■■■□□ 2.92
RB1CC1-204ENST00000518211 ABCA10Q8WWZ4 1543 aa33.18■■■□□ 2.9
RB1CC1-204ENST00000518211 CEP170Q5SW79 1584 aa33.1■■■□□ 2.89
RB1CC1-204ENST00000518211 GRIN2AQ12879 1464 aa33.09■■■□□ 2.89
RB1CC1-204ENST00000518211 ADAMTS12P58397 1594 aa33.07■■■□□ 2.88
RB1CC1-204ENST00000518211 KIF13AQ9H1H9 1805 aa33.02■■■□□ 2.88
RB1CC1-204ENST00000518211 SHROOM2Q13796 1616 aa32.99■■■□□ 2.87
RB1CC1-204ENST00000518211 NUP160Q12769 1436 aa32.99■■■□□ 2.87
RB1CC1-204ENST00000518211 BIVM-ERCC5R4GMW8 1640 aa32.88■■■□□ 2.85
RB1CC1-204ENST00000518211 WRNQ14191 1432 aaPredicted RBP eCLIP32.85■■■□□ 2.85
RB1CC1-204ENST00000518211 TOP2BQ02880 1626 aa32.82■■■□□ 2.84
RB1CC1-204ENST00000518211 FHAD1B1AJZ9 1412 aa32.81■■■□□ 2.84
RB1CC1-204ENST00000518211 ERICH3Q5RHP9 1530 aa32.72■■■□□ 2.83
RB1CC1-204ENST00000518211 PRG4Q92954 1404 aaPredicted RBP32.72■■■□□ 2.83
RB1CC1-204ENST00000518211 SUPT5HO00267 1087 aaKnown RBP32.69■■■□□ 2.82
RB1CC1-204ENST00000518211 RUSC2Q8N2Y8 1516 aa32.62■■■□□ 2.81
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms