RNA–Protein interactions for RNA: ENST00000518198.1

DENND3-205, Transcript of DENN domain containing 3, humanhuman

TSL 2

Gene DENND3, Length 1,848 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND3-205ENST00000518198 NISCHQ9Y2I1 1504 aa56.84■■■■■ 6.69
DENND3-205ENST00000518198 CCDC180Q9P1Z9 1646 aa49.55■■■■■ 5.52
DENND3-205ENST00000518198 ZCCHC6Q5VYS8 1495 aaKnown RBP47.73■■■■■ 5.23
DENND3-205ENST00000518198 DCAF1Q9Y4B6 1507 aa47■■■■■ 5.11
DENND3-205ENST00000518198 DCAF8L2P0C7V8 631 aa46.96■■■■■ 5.11
DENND3-205ENST00000518198 ABCC9O60706 1549 aa46.92■■■■■ 5.1
DENND3-205ENST00000518198 MYO15BQ96JP2 1530 aa46.47■■■■■ 5.03
DENND3-205ENST00000518198 SHROOM4Q9ULL8 1493 aa46.31■■■■■ 5
DENND3-205ENST00000518198 NACADO15069 1562 aa46.18■■■■■ 4.98
DENND3-205ENST00000518198 RB1CC1Q8TDY2 1594 aa45.79■■■■■ 4.92
DENND3-205ENST00000518198 SCRIBQ14160 1630 aa45.56■■■■■ 4.88
DENND3-205ENST00000518198 UNC13AQ9UPW8 1703 aa44.88■■■■■ 4.77
DENND3-205ENST00000518198 SUPT5HO00267 1087 aaKnown RBP44.56■■■■■ 4.72
DENND3-205ENST00000518198 BICRAQ9NZM4 1560 aa44.44■■■■■ 4.7
DENND3-205ENST00000518198 PABPN1Q86U42 306 aaKnown RBP eCLIP44.27■■■■■ 4.68
DENND3-205ENST00000518198 CECR2Q9BXF3 1484 aa44.18■■■■■ 4.66
DENND3-205ENST00000518198 RSF1Q96T23 1441 aaPredicted RBP44.09■■■■■ 4.65
DENND3-205ENST00000518198 MROH2BQ7Z745 1585 aa43.91■■■■■ 4.62
DENND3-205ENST00000518198 BAZ1AQ9NRL2 1556 aaPredicted RBP43.88■■■■■ 4.61
DENND3-205ENST00000518198 SMARCA4P51532 1647 aa43.69■■■■■ 4.58
DENND3-205ENST00000518198 WIZO95785 1651 aa43.54■■■■■ 4.56
DENND3-205ENST00000518198 PEG3Q9GZU2 1588 aa43.17■■■■■ 4.5
DENND3-205ENST00000518198 EIF4G1Q04637 1599 aaKnown RBP43.08■■■■■ 4.49
DENND3-205ENST00000518198 TOP2AP11388 1531 aaKnown RBP43.08■■■■■ 4.49
DENND3-205ENST00000518198 ATAD2BQ9ULI0 1458 aa43■■■■■ 4.47
DENND3-205ENST00000518198 SMARCA2P51531 1590 aa42.95■■■■■ 4.47
DENND3-205ENST00000518198 BAZ1BQ9UIG0 1483 aaKnown RBP42.74■■■■■ 4.43
DENND3-205ENST00000518198 CCDC88BA6NC98 1476 aa42.67■■■■■ 4.42
DENND3-205ENST00000518198 CHIC1Q5VXU3 224 aa42.66■■■■■ 4.42
DENND3-205ENST00000518198 NCAPD3P42695 1498 aa42.65■■■■■ 4.42
DENND3-205ENST00000518198 HMGXB3Q12766 1538 aa42.56■■■■■ 4.4
DENND3-205ENST00000518198 CC2D2AQ9P2K1 1620 aa42.46■■■■■ 4.39
DENND3-205ENST00000518198 TRIM41Q8WV44 630 aa41.9■■■■■ 4.3
DENND3-205ENST00000518198 ABCC8Q09428 1581 aa41.73■■■■■ 4.27
DENND3-205ENST00000518198 CFTRP13569 1480 aa41.69■■■■■ 4.26
DENND3-205ENST00000518198 CADPSQ9ULU8 1353 aa41.55■■■■■ 4.24
DENND3-205ENST00000518198 WRNQ14191 1432 aaPredicted RBP eCLIP41.48■■■■■ 4.23
DENND3-205ENST00000518198 DNAJC5BQ9UF47 199 aa41.47■■■■■ 4.23
DENND3-205ENST00000518198 PRDM2Q13029 1718 aa41.43■■■■■ 4.22
DENND3-205ENST00000518198 SYNJ1O43426 1573 aa41.3■■■■■ 4.2
DENND3-205ENST00000518198 NESP48681 1621 aa41.19■■■■■ 4.18
DENND3-205ENST00000518198 LAMC3Q9Y6N6 1575 aa41.18■■■■■ 4.18
DENND3-205ENST00000518198 TOP2BQ02880 1626 aa41.15■■■■■ 4.18
DENND3-205ENST00000518198 FAM9AQ8IZU1 332 aaPredicted RBP41.13■■■■■ 4.17
DENND3-205ENST00000518198 BIVM-ERCC5R4GMW8 1640 aa41.1■■■■■ 4.17
DENND3-205ENST00000518198 FANCD2Q9BXW9 1451 aa41.08■■■■■ 4.17
DENND3-205ENST00000518198 CUX1P39880 1505 aa41.06■■■■■ 4.16
DENND3-205ENST00000518198 LOC105371045A0A1W2PR82 267 aa41.02■■■■■ 4.16
DENND3-205ENST00000518198 SOGA1O94964 1423 aa40.96■■■■■ 4.15
DENND3-205ENST00000518198 PDS5BQ9NTI5 1447 aa40.87■■■■■ 4.13
DENND3-205ENST00000518198 EEA1Q15075 1411 aa40.86■■■■■ 4.13
DENND3-205ENST00000518198 RUSC2Q8N2Y8 1516 aa40.82■■■■■ 4.12
DENND3-205ENST00000518198 CEP164Q9UPV0 1460 aa40.81■■■■■ 4.12
DENND3-205ENST00000518198 DNMBPQ6XZF7 1577 aa40.69■■■■■ 4.1
DENND3-205ENST00000518198 KIF21AQ7Z4S6 1674 aa40.68■■■■■ 4.1
DENND3-205ENST00000518198 CSRNP3Q8WYN3 585 aa40.67■■■■■ 4.1
DENND3-205ENST00000518198 TOPBP1Q92547 1522 aa40.63■■■■■ 4.09
DENND3-205ENST00000518198 FGD5Q6ZNL6 1462 aa40.61■■■■■ 4.09
DENND3-205ENST00000518198 URB2Q14146 1524 aaKnown RBP40.57■■■■■ 4.09
DENND3-205ENST00000518198 EHMT2Q96KQ7 1210 aa40.53■■■■■ 4.08
DENND3-205ENST00000518198 KIF27Q86VH2 1401 aa40.44■■■■■ 4.06
DENND3-205ENST00000518198 POLA1P09884 1462 aaPredicted RBP40.43■■■■■ 4.06
DENND3-205ENST00000518198 CUX2O14529 1486 aa40.34■■■■■ 4.05
DENND3-205ENST00000518198 MRC2Q9UBG0 1479 aa40.34■■■■■ 4.05
DENND3-205ENST00000518198 KIF21BO75037 1637 aa40.32■■■■■ 4.04
DENND3-205ENST00000518198 RAD54L2Q9Y4B4 1467 aa40.3■■■■■ 4.04
DENND3-205ENST00000518198 GOLGA3Q08378 1498 aa40.29■■■■■ 4.04
DENND3-205ENST00000518198 ABCA10Q8WWZ4 1543 aa40.26■■■■■ 4.04
DENND3-205ENST00000518198 ERCC6Q03468 1493 aa40.21■■■■■ 4.03
DENND3-205ENST00000518198 TNIKQ9UKE5 1360 aa40.18■■■■■ 4.02
DENND3-205ENST00000518198 PRXQ9BXM0 1461 aa40.17■■■■■ 4.02
DENND3-205ENST00000518198 UBTFP17480 764 aaKnown RBP40.13■■■■■ 4.01
DENND3-205ENST00000518198 WDR62O43379 1518 aa40.13■■■■■ 4.01
DENND3-205ENST00000518198 IGF1RP08069 1367 aa40.12■■■■■ 4.01
DENND3-205ENST00000518198 RAPGEF2Q9Y4G8 1499 aa40.12■■■■■ 4.01
DENND3-205ENST00000518198 WDR97A6NE52 1622 aa40.11■■■■■ 4.01
DENND3-205ENST00000518198 ERICH3Q5RHP9 1530 aa40.06■■■■■ 4
DENND3-205ENST00000518198 TARBP1Q13395 1621 aaKnown RBP40.03■■■■■ 4
DENND3-205ENST00000518198 THOC2Q8NI27 1593 aaKnown RBP40.01■■■■■ 4
DENND3-205ENST00000518198 CEP162Q5TB80 1403 aa39.94■■■■□ 3.98
DENND3-205ENST00000518198 TDRD9Q8NDG6 1382 aaKnown RBP39.93■■■■□ 3.98
DENND3-205ENST00000518198 ABCA5Q8WWZ7 1642 aa39.92■■■■□ 3.98
DENND3-205ENST00000518198 CARMIL1Q5VZK9 1371 aa39.9■■■■□ 3.98
DENND3-205ENST00000518198 GAPVD1Q14C86 1478 aa39.86■■■■□ 3.97
DENND3-205ENST00000518198 IFT140Q96RY7 1462 aa39.85■■■■□ 3.97
DENND3-205ENST00000518198 CUL7Q14999 1698 aa39.76■■■■□ 3.95
DENND3-205ENST00000518198 AQRO60306 1485 aaKnown RBP eCLIP39.68■■■■□ 3.94
DENND3-205ENST00000518198 CLIP1P30622 1438 aa39.65■■■■□ 3.94
DENND3-205ENST00000518198 ZNF608Q9ULD9 1512 aaPredicted RBP39.64■■■■□ 3.94
DENND3-205ENST00000518198 PBRM1Q86U86 1689 aa39.6■■■■□ 3.93
DENND3-205ENST00000518198 GRIN2BQ13224 1484 aa39.55■■■■□ 3.92
DENND3-205ENST00000518198 EIF4G3O43432 1585 aaKnown RBP39.48■■■■□ 3.91
DENND3-205ENST00000518198 RANGAP1P46060 587 aaPredicted RBP39.47■■■■□ 3.91
DENND3-205ENST00000518198 FHAD1B1AJZ9 1412 aa39.42■■■■□ 3.9
DENND3-205ENST00000518198 ADAMTS12P58397 1594 aa39.39■■■■□ 3.9
DENND3-205ENST00000518198 CTTNBP2Q8WZ74 1663 aa39.3■■■■□ 3.88
DENND3-205ENST00000518198 VPS8Q8N3P4 1428 aa39.29■■■■□ 3.88
DENND3-205ENST00000518198 SNAPC4Q5SXM2 1469 aa39.28■■■■□ 3.88
DENND3-205ENST00000518198 ARHGAP35Q9NRY4 1499 aa39.28■■■■□ 3.88
DENND3-205ENST00000518198 ARAP1Q96P48 1450 aa39.27■■■■□ 3.88
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms