RNA–Protein interactions for RNA: ENST00000518052.1

COL13A1-211, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 5

Gene COL13A1, Length 290 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-211ENST00000518052 NISCHQ9Y2I1 1504 aa30.3■■■□□ 2.44
COL13A1-211ENST00000518052 ABCC9O60706 1549 aa27.14■■□□□ 1.94
COL13A1-211ENST00000518052 CCDC180Q9P1Z9 1646 aa27.04■■□□□ 1.92
COL13A1-211ENST00000518052 RB1CC1Q8TDY2 1594 aa25.73■■□□□ 1.71
COL13A1-211ENST00000518052 DCAF8L2P0C7V8 631 aa25.73■■□□□ 1.71
COL13A1-211ENST00000518052 NACADO15069 1562 aa25.56■■□□□ 1.68
COL13A1-211ENST00000518052 DNAJC5BQ9UF47 199 aa25.45■■□□□ 1.66
COL13A1-211ENST00000518052 PABPN1Q86U42 306 aaKnown RBP eCLIP25.36■■□□□ 1.65
COL13A1-211ENST00000518052 UNC13AQ9UPW8 1703 aa25.21■■□□□ 1.63
COL13A1-211ENST00000518052 MYO15BQ96JP2 1530 aa25.17■■□□□ 1.62
COL13A1-211ENST00000518052 ZCCHC6Q5VYS8 1495 aaKnown RBP25.11■■□□□ 1.61
COL13A1-211ENST00000518052 BICRAQ9NZM4 1560 aa25.05■■□□□ 1.6
COL13A1-211ENST00000518052 DCAF1Q9Y4B6 1507 aa24.91■■□□□ 1.58
COL13A1-211ENST00000518052 SCRIBQ14160 1630 aa24.81■■□□□ 1.56
COL13A1-211ENST00000518052 SHROOM4Q9ULL8 1493 aa24.52■■□□□ 1.52
COL13A1-211ENST00000518052 CC2D2AQ9P2K1 1620 aa24.46■■□□□ 1.51
COL13A1-211ENST00000518052 EIF4G1Q04637 1599 aaKnown RBP24.41■■□□□ 1.5
COL13A1-211ENST00000518052 CECR2Q9BXF3 1484 aa24.38■■□□□ 1.49
COL13A1-211ENST00000518052 NCAPD3P42695 1498 aa23.63■■□□□ 1.37
COL13A1-211ENST00000518052 ATAD2BQ9ULI0 1458 aa23.62■■□□□ 1.37
COL13A1-211ENST00000518052 SMARCA4P51532 1647 aa23.6■■□□□ 1.37
COL13A1-211ENST00000518052 SMARCA2P51531 1590 aa23.49■■□□□ 1.35
COL13A1-211ENST00000518052 BAZ1AQ9NRL2 1556 aaPredicted RBP23.46■■□□□ 1.35
COL13A1-211ENST00000518052 HMGXB3Q12766 1538 aa23.43■■□□□ 1.34
COL13A1-211ENST00000518052 MROH2BQ7Z745 1585 aa23.41■■□□□ 1.34
COL13A1-211ENST00000518052 BAZ1BQ9UIG0 1483 aaKnown RBP23.39■■□□□ 1.34
COL13A1-211ENST00000518052 ERCC6Q03468 1493 aa23.36■■□□□ 1.33
COL13A1-211ENST00000518052 NESP48681 1621 aa23.36■■□□□ 1.33
COL13A1-211ENST00000518052 PEG3Q9GZU2 1588 aa23.3■■□□□ 1.32
COL13A1-211ENST00000518052 CUX2O14529 1486 aa23.19■■□□□ 1.3
COL13A1-211ENST00000518052 DNAJC5Q9H3Z4 198 aa23.17■■□□□ 1.3
COL13A1-211ENST00000518052 WIZO95785 1651 aa23.14■■□□□ 1.29
COL13A1-211ENST00000518052 LAMC3Q9Y6N6 1575 aa23.05■■□□□ 1.28
COL13A1-211ENST00000518052 KIF21AQ7Z4S6 1674 aa23■■□□□ 1.27
COL13A1-211ENST00000518052 THOC2Q8NI27 1593 aaKnown RBP22.99■■□□□ 1.27
COL13A1-211ENST00000518052 CADPSQ9ULU8 1353 aa22.96■■□□□ 1.27
COL13A1-211ENST00000518052 RSF1Q96T23 1441 aaPredicted RBP22.95■■□□□ 1.26
COL13A1-211ENST00000518052 PDS5BQ9NTI5 1447 aa22.95■■□□□ 1.26
COL13A1-211ENST00000518052 TOP2AP11388 1531 aaKnown RBP22.77■■□□□ 1.24
COL13A1-211ENST00000518052 MRC2Q9UBG0 1479 aa22.77■■□□□ 1.24
COL13A1-211ENST00000518052 FANCD2Q9BXW9 1451 aa22.71■■□□□ 1.23
COL13A1-211ENST00000518052 CEP164Q9UPV0 1460 aa22.7■■□□□ 1.22
COL13A1-211ENST00000518052 CFTRP13569 1480 aa22.69■■□□□ 1.22
COL13A1-211ENST00000518052 WDR62O43379 1518 aa22.68■■□□□ 1.22
COL13A1-211ENST00000518052 CCDC88BA6NC98 1476 aa22.59■■□□□ 1.21
COL13A1-211ENST00000518052 URB2Q14146 1524 aaKnown RBP22.54■■□□□ 1.2
COL13A1-211ENST00000518052 PRDM2Q13029 1718 aa22.41■■□□□ 1.18
COL13A1-211ENST00000518052 TRIM41Q8WV44 630 aa22.32■■□□□ 1.16
COL13A1-211ENST00000518052 TOPBP1Q92547 1522 aa22.29■■□□□ 1.16
COL13A1-211ENST00000518052 ZNF608Q9ULD9 1512 aaPredicted RBP22.29■■□□□ 1.16
COL13A1-211ENST00000518052 OSCARQ8IYS5 282 aa22.25■■□□□ 1.15
COL13A1-211ENST00000518052 IFT140Q96RY7 1462 aa22.22■■□□□ 1.15
COL13A1-211ENST00000518052 DNMBPQ6XZF7 1577 aa22.18■■□□□ 1.14
COL13A1-211ENST00000518052 SUPT5HO00267 1087 aaKnown RBP22.16■■□□□ 1.14
COL13A1-211ENST00000518052 ABCC8Q09428 1581 aa22.15■■□□□ 1.14
COL13A1-211ENST00000518052 AQRO60306 1485 aaKnown RBP eCLIP22.1■■□□□ 1.13
COL13A1-211ENST00000518052 EIF4G3O43432 1585 aaKnown RBP22.09■■□□□ 1.13
COL13A1-211ENST00000518052 TARBP1Q13395 1621 aaKnown RBP22.07■■□□□ 1.12
COL13A1-211ENST00000518052 POLA1P09884 1462 aaPredicted RBP22.07■■□□□ 1.12
COL13A1-211ENST00000518052 RAD54L2Q9Y4B4 1467 aa22.07■■□□□ 1.12
COL13A1-211ENST00000518052 TDRD9Q8NDG6 1382 aaKnown RBP21.99■■□□□ 1.11
COL13A1-211ENST00000518052 SOGA1O94964 1423 aa21.99■■□□□ 1.11
COL13A1-211ENST00000518052 FBLN2P98095 1184 aa21.99■■□□□ 1.11
COL13A1-211ENST00000518052 CUX1P39880 1505 aa21.98■■□□□ 1.11
COL13A1-211ENST00000518052 FGD5Q6ZNL6 1462 aa21.96■■□□□ 1.11
COL13A1-211ENST00000518052 RIMBP3CA6NJZ7 1639 aa21.95■■□□□ 1.1
COL13A1-211ENST00000518052 RIMBP3BA6NNM3 1639 aa21.95■■□□□ 1.1
COL13A1-211ENST00000518052 RIMBP3Q9UFD9 1639 aa21.95■■□□□ 1.1
COL13A1-211ENST00000518052 CHD1O14646 1710 aa21.92■■□□□ 1.1
COL13A1-211ENST00000518052 ARHGEF11O15085 1522 aa21.87■■□□□ 1.09
COL13A1-211ENST00000518052 SNAPC4Q5SXM2 1469 aa21.83■■□□□ 1.09
COL13A1-211ENST00000518052 CYB5RLQ6IPT4 315 aa21.81■■□□□ 1.08
COL13A1-211ENST00000518052 CHMP7Q8WUX9 453 aaPredicted RBP21.77■■□□□ 1.08
COL13A1-211ENST00000518052 GRIN2BQ13224 1484 aa21.74■■□□□ 1.07
COL13A1-211ENST00000518052 WDR97A6NE52 1622 aa21.73■■□□□ 1.07
COL13A1-211ENST00000518052 GAPVD1Q14C86 1478 aa21.71■■□□□ 1.07
COL13A1-211ENST00000518052 MAGI1Q96QZ7 1491 aaPredicted RBP21.7■■□□□ 1.06
COL13A1-211ENST00000518052 ARAP1Q96P48 1450 aa21.69■■□□□ 1.06
COL13A1-211ENST00000518052 ABCA10Q8WWZ4 1543 aa21.67■■□□□ 1.06
COL13A1-211ENST00000518052 PBRM1Q86U86 1689 aa21.66■■□□□ 1.06
COL13A1-211ENST00000518052 SYNJ2O15056 1496 aa21.65■■□□□ 1.06
COL13A1-211ENST00000518052 CLASP1Q7Z460 1538 aa21.64■■□□□ 1.05
COL13A1-211ENST00000518052 SYNJ1O43426 1573 aa21.63■■□□□ 1.05
COL13A1-211ENST00000518052 ABCA5Q8WWZ7 1642 aa21.62■■□□□ 1.05
COL13A1-211ENST00000518052 WRNQ14191 1432 aaPredicted RBP eCLIP21.62■■□□□ 1.05
COL13A1-211ENST00000518052 TOP2BQ02880 1626 aa21.58■■□□□ 1.05
COL13A1-211ENST00000518052 BIVM-ERCC5R4GMW8 1640 aa21.58■■□□□ 1.04
COL13A1-211ENST00000518052 TRHP20396 242 aaPredicted RBP21.53■■□□□ 1.04
COL13A1-211ENST00000518052 GRIN2AQ12879 1464 aa21.47■■□□□ 1.03
COL13A1-211ENST00000518052 ADAMTS12P58397 1594 aa21.47■■□□□ 1.03
COL13A1-211ENST00000518052 ERCC6L2Q5T890 1561 aa21.43■■□□□ 1.02
COL13A1-211ENST00000518052 CEP170Q5SW79 1584 aa21.42■■□□□ 1.02
COL13A1-211ENST00000518052 FHAD1B1AJZ9 1412 aa21.41■■□□□ 1.02
COL13A1-211ENST00000518052 NUP160Q12769 1436 aa21.38■■□□□ 1.01
COL13A1-211ENST00000518052 ERICH3Q5RHP9 1530 aa21.37■■□□□ 1.01
COL13A1-211ENST00000518052 SHROOM2Q13796 1616 aa21.26■□□□□ 0.99
COL13A1-211ENST00000518052 JPH4Q96JJ6 628 aa21.24■□□□□ 0.99
COL13A1-211ENST00000518052 PRG4Q92954 1404 aaPredicted RBP21.23■□□□□ 0.99
COL13A1-211ENST00000518052 IGF1RP08069 1367 aa21.23■□□□□ 0.99
COL13A1-211ENST00000518052 KIF27Q86VH2 1401 aa21.18■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms