RNA–Protein interactions for RNA: ENST00000518013.5

NSMCE2-204, Transcript of NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase, humanhuman

TSL 3

Gene NSMCE2, Length 405 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2-204ENST00000518013 NISCHQ9Y2I1 1504 aa32.01■■■□□ 2.72
NSMCE2-204ENST00000518013 CCDC180Q9P1Z9 1646 aa28.47■■■□□ 2.15
NSMCE2-204ENST00000518013 ABCC9O60706 1549 aa27.74■■■□□ 2.03
NSMCE2-204ENST00000518013 RB1CC1Q8TDY2 1594 aa26.75■■□□□ 1.87
NSMCE2-204ENST00000518013 NACADO15069 1562 aa26.73■■□□□ 1.87
NSMCE2-204ENST00000518013 DCAF8L2P0C7V8 631 aa26.73■■□□□ 1.87
NSMCE2-204ENST00000518013 ZCCHC6Q5VYS8 1495 aaKnown RBP26.69■■□□□ 1.86
NSMCE2-204ENST00000518013 MYO15BQ96JP2 1530 aa26.58■■□□□ 1.85
NSMCE2-204ENST00000518013 DCAF1Q9Y4B6 1507 aa26.5■■□□□ 1.83
NSMCE2-204ENST00000518013 UNC13AQ9UPW8 1703 aa26.11■■□□□ 1.77
NSMCE2-204ENST00000518013 SCRIBQ14160 1630 aa25.98■■□□□ 1.75
NSMCE2-204ENST00000518013 PABPN1Q86U42 306 aaKnown RBP eCLIP25.91■■□□□ 1.74
NSMCE2-204ENST00000518013 BICRAQ9NZM4 1560 aa25.88■■□□□ 1.73
NSMCE2-204ENST00000518013 SHROOM4Q9ULL8 1493 aa25.68■■□□□ 1.7
NSMCE2-204ENST00000518013 DNAJC5BQ9UF47 199 aa25.28■■□□□ 1.64
NSMCE2-204ENST00000518013 EIF4G1Q04637 1599 aaKnown RBP25.22■■□□□ 1.63
NSMCE2-204ENST00000518013 CC2D2AQ9P2K1 1620 aa25.09■■□□□ 1.61
NSMCE2-204ENST00000518013 CECR2Q9BXF3 1484 aa24.92■■□□□ 1.58
NSMCE2-204ENST00000518013 BAZ1AQ9NRL2 1556 aaPredicted RBP24.84■■□□□ 1.57
NSMCE2-204ENST00000518013 SMARCA4P51532 1647 aa24.84■■□□□ 1.57
NSMCE2-204ENST00000518013 SMARCA2P51531 1590 aa24.67■■□□□ 1.54
NSMCE2-204ENST00000518013 ATAD2BQ9ULI0 1458 aa24.66■■□□□ 1.54
NSMCE2-204ENST00000518013 MROH2BQ7Z745 1585 aa24.66■■□□□ 1.54
NSMCE2-204ENST00000518013 NCAPD3P42695 1498 aa24.63■■□□□ 1.53
NSMCE2-204ENST00000518013 PEG3Q9GZU2 1588 aa24.59■■□□□ 1.53
NSMCE2-204ENST00000518013 HMGXB3Q12766 1538 aa24.56■■□□□ 1.52
NSMCE2-204ENST00000518013 BAZ1BQ9UIG0 1483 aaKnown RBP24.51■■□□□ 1.51
NSMCE2-204ENST00000518013 WIZO95785 1651 aa24.41■■□□□ 1.5
NSMCE2-204ENST00000518013 RSF1Q96T23 1441 aaPredicted RBP24.41■■□□□ 1.5
NSMCE2-204ENST00000518013 TOP2AP11388 1531 aaKnown RBP24.19■■□□□ 1.46
NSMCE2-204ENST00000518013 LAMC3Q9Y6N6 1575 aa24.01■■□□□ 1.43
NSMCE2-204ENST00000518013 NESP48681 1621 aa24.01■■□□□ 1.43
NSMCE2-204ENST00000518013 ERCC6Q03468 1493 aa23.95■■□□□ 1.42
NSMCE2-204ENST00000518013 CADPSQ9ULU8 1353 aa23.92■■□□□ 1.42
NSMCE2-204ENST00000518013 SUPT5HO00267 1087 aaKnown RBP23.88■■□□□ 1.41
NSMCE2-204ENST00000518013 CCDC88BA6NC98 1476 aa23.86■■□□□ 1.41
NSMCE2-204ENST00000518013 PDS5BQ9NTI5 1447 aa23.84■■□□□ 1.41
NSMCE2-204ENST00000518013 CFTRP13569 1480 aa23.8■■□□□ 1.4
NSMCE2-204ENST00000518013 KIF21AQ7Z4S6 1674 aa23.76■■□□□ 1.39
NSMCE2-204ENST00000518013 PRDM2Q13029 1718 aa23.68■■□□□ 1.38
NSMCE2-204ENST00000518013 FANCD2Q9BXW9 1451 aa23.67■■□□□ 1.38
NSMCE2-204ENST00000518013 CEP164Q9UPV0 1460 aa23.66■■□□□ 1.38
NSMCE2-204ENST00000518013 THOC2Q8NI27 1593 aaKnown RBP23.65■■□□□ 1.38
NSMCE2-204ENST00000518013 CUX2O14529 1486 aa23.64■■□□□ 1.38
NSMCE2-204ENST00000518013 MRC2Q9UBG0 1479 aa23.6■■□□□ 1.37
NSMCE2-204ENST00000518013 WDR62O43379 1518 aa23.5■■□□□ 1.35
NSMCE2-204ENST00000518013 URB2Q14146 1524 aaKnown RBP23.4■■□□□ 1.34
NSMCE2-204ENST00000518013 ABCC8Q09428 1581 aa23.32■■□□□ 1.32
NSMCE2-204ENST00000518013 DNMBPQ6XZF7 1577 aa23.3■■□□□ 1.32
NSMCE2-204ENST00000518013 TOPBP1Q92547 1522 aa23.29■■□□□ 1.32
NSMCE2-204ENST00000518013 IFT140Q96RY7 1462 aa23.15■■□□□ 1.3
NSMCE2-204ENST00000518013 CUX1P39880 1505 aa23.13■■□□□ 1.29
NSMCE2-204ENST00000518013 POLA1P09884 1462 aaPredicted RBP23.1■■□□□ 1.29
NSMCE2-204ENST00000518013 FGD5Q6ZNL6 1462 aa23.07■■□□□ 1.28
NSMCE2-204ENST00000518013 WRNQ14191 1432 aaPredicted RBP eCLIP23.05■■□□□ 1.28
NSMCE2-204ENST00000518013 TARBP1Q13395 1621 aaKnown RBP23.02■■□□□ 1.28
NSMCE2-204ENST00000518013 SOGA1O94964 1423 aa23■■□□□ 1.27
NSMCE2-204ENST00000518013 ZNF608Q9ULD9 1512 aaPredicted RBP22.99■■□□□ 1.27
NSMCE2-204ENST00000518013 TOP2BQ02880 1626 aa22.99■■□□□ 1.27
NSMCE2-204ENST00000518013 BIVM-ERCC5R4GMW8 1640 aa22.99■■□□□ 1.27
NSMCE2-204ENST00000518013 RAD54L2Q9Y4B4 1467 aa22.98■■□□□ 1.27
NSMCE2-204ENST00000518013 SYNJ1O43426 1573 aa22.97■■□□□ 1.27
NSMCE2-204ENST00000518013 EIF4G3O43432 1585 aaKnown RBP22.95■■□□□ 1.26
NSMCE2-204ENST00000518013 WDR97A6NE52 1622 aa22.9■■□□□ 1.26
NSMCE2-204ENST00000518013 AQRO60306 1485 aaKnown RBP eCLIP22.87■■□□□ 1.25
NSMCE2-204ENST00000518013 TDRD9Q8NDG6 1382 aaKnown RBP22.85■■□□□ 1.25
NSMCE2-204ENST00000518013 ABCA10Q8WWZ4 1543 aa22.84■■□□□ 1.25
NSMCE2-204ENST00000518013 DNAJC5Q9H3Z4 198 aa22.76■■□□□ 1.23
NSMCE2-204ENST00000518013 ABCA5Q8WWZ7 1642 aa22.75■■□□□ 1.23
NSMCE2-204ENST00000518013 GAPVD1Q14C86 1478 aa22.75■■□□□ 1.23
NSMCE2-204ENST00000518013 GRIN2BQ13224 1484 aa22.74■■□□□ 1.23
NSMCE2-204ENST00000518013 PBRM1Q86U86 1689 aa22.73■■□□□ 1.23
NSMCE2-204ENST00000518013 SNAPC4Q5SXM2 1469 aa22.7■■□□□ 1.22
NSMCE2-204ENST00000518013 MAGI1Q96QZ7 1491 aaPredicted RBP22.68■■□□□ 1.22
NSMCE2-204ENST00000518013 OSCARQ8IYS5 282 aa22.66■■□□□ 1.22
NSMCE2-204ENST00000518013 CHD1O14646 1710 aa22.65■■□□□ 1.22
NSMCE2-204ENST00000518013 FBLN2P98095 1184 aa22.62■■□□□ 1.21
NSMCE2-204ENST00000518013 SYNJ2O15056 1496 aa22.59■■□□□ 1.21
NSMCE2-204ENST00000518013 ERICH3Q5RHP9 1530 aa22.58■■□□□ 1.21
NSMCE2-204ENST00000518013 KIF27Q86VH2 1401 aa22.57■■□□□ 1.2
NSMCE2-204ENST00000518013 CHMP7Q8WUX9 453 aaPredicted RBP22.57■■□□□ 1.2
NSMCE2-204ENST00000518013 TRIM41Q8WV44 630 aa22.56■■□□□ 1.2
NSMCE2-204ENST00000518013 ADAMTS12P58397 1594 aa22.55■■□□□ 1.2
NSMCE2-204ENST00000518013 FHAD1B1AJZ9 1412 aa22.5■■□□□ 1.19
NSMCE2-204ENST00000518013 GRIN2AQ12879 1464 aa22.45■■□□□ 1.18
NSMCE2-204ENST00000518013 CUL7Q14999 1698 aa22.42■■□□□ 1.18
NSMCE2-204ENST00000518013 IGF1RP08069 1367 aa22.4■■□□□ 1.18
NSMCE2-204ENST00000518013 CLASP1Q7Z460 1538 aa22.38■■□□□ 1.17
NSMCE2-204ENST00000518013 NUP160Q12769 1436 aa22.33■■□□□ 1.17
NSMCE2-204ENST00000518013 RUSC2Q8N2Y8 1516 aa22.32■■□□□ 1.16
NSMCE2-204ENST00000518013 CEP170Q5SW79 1584 aa22.32■■□□□ 1.16
NSMCE2-204ENST00000518013 CARMIL1Q5VZK9 1371 aa22.31■■□□□ 1.16
NSMCE2-204ENST00000518013 ARHGEF11O15085 1522 aa22.3■■□□□ 1.16
NSMCE2-204ENST00000518013 RIMBP3CA6NJZ7 1639 aa22.29■■□□□ 1.16
NSMCE2-204ENST00000518013 RIMBP3BA6NNM3 1639 aa22.29■■□□□ 1.16
NSMCE2-204ENST00000518013 RIMBP3Q9UFD9 1639 aa22.29■■□□□ 1.16
NSMCE2-204ENST00000518013 CHIC1Q5VXU3 224 aa22.29■■□□□ 1.16
NSMCE2-204ENST00000518013 EEA1Q15075 1411 aa22.21■■□□□ 1.15
NSMCE2-204ENST00000518013 RAPGEF2Q9Y4G8 1499 aa22.21■■□□□ 1.15
NSMCE2-204ENST00000518013 SHROOM2Q13796 1616 aa22.16■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms