RNA–Protein interactions for RNA: ENST00000517997.5

CDK16-210, Transcript of cyclin dependent kinase 16, humanhuman

TSL 4

Gene CDK16, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK16-210ENST00000517997 NISCHQ9Y2I1 1504 aa32.11■■■□□ 2.73
CDK16-210ENST00000517997 CCDC180Q9P1Z9 1646 aa28.64■■■□□ 2.18
CDK16-210ENST00000517997 ABCC9O60706 1549 aa27.92■■■□□ 2.06
CDK16-210ENST00000517997 RB1CC1Q8TDY2 1594 aa26.92■■□□□ 1.9
CDK16-210ENST00000517997 NACADO15069 1562 aa26.88■■□□□ 1.89
CDK16-210ENST00000517997 DCAF8L2P0C7V8 631 aa26.77■■□□□ 1.88
CDK16-210ENST00000517997 ZCCHC6Q5VYS8 1495 aaKnown RBP26.76■■□□□ 1.87
CDK16-210ENST00000517997 MYO15BQ96JP2 1530 aa26.7■■□□□ 1.87
CDK16-210ENST00000517997 DCAF1Q9Y4B6 1507 aa26.6■■□□□ 1.85
CDK16-210ENST00000517997 UNC13AQ9UPW8 1703 aa26.39■■□□□ 1.82
CDK16-210ENST00000517997 BICRAQ9NZM4 1560 aa26.08■■□□□ 1.77
CDK16-210ENST00000517997 SCRIBQ14160 1630 aa26.08■■□□□ 1.77
CDK16-210ENST00000517997 PABPN1Q86U42 306 aaKnown RBP eCLIP26.04■■□□□ 1.76
CDK16-210ENST00000517997 SHROOM4Q9ULL8 1493 aa25.83■■□□□ 1.73
CDK16-210ENST00000517997 DNAJC5BQ9UF47 199 aa25.57■■□□□ 1.68
CDK16-210ENST00000517997 EIF4G1Q04637 1599 aaKnown RBP25.39■■□□□ 1.66
CDK16-210ENST00000517997 CC2D2AQ9P2K1 1620 aa25.3■■□□□ 1.64
CDK16-210ENST00000517997 CECR2Q9BXF3 1484 aa25.09■■□□□ 1.61
CDK16-210ENST00000517997 SMARCA4P51532 1647 aa24.96■■□□□ 1.59
CDK16-210ENST00000517997 BAZ1AQ9NRL2 1556 aaPredicted RBP24.91■■□□□ 1.58
CDK16-210ENST00000517997 SMARCA2P51531 1590 aa24.79■■□□□ 1.56
CDK16-210ENST00000517997 ATAD2BQ9ULI0 1458 aa24.77■■□□□ 1.56
CDK16-210ENST00000517997 NCAPD3P42695 1498 aa24.76■■□□□ 1.55
CDK16-210ENST00000517997 MROH2BQ7Z745 1585 aa24.75■■□□□ 1.55
CDK16-210ENST00000517997 PEG3Q9GZU2 1588 aa24.71■■□□□ 1.55
CDK16-210ENST00000517997 HMGXB3Q12766 1538 aa24.68■■□□□ 1.54
CDK16-210ENST00000517997 BAZ1BQ9UIG0 1483 aaKnown RBP24.58■■□□□ 1.53
CDK16-210ENST00000517997 WIZO95785 1651 aa24.52■■□□□ 1.52
CDK16-210ENST00000517997 RSF1Q96T23 1441 aaPredicted RBP24.44■■□□□ 1.5
CDK16-210ENST00000517997 TOP2AP11388 1531 aaKnown RBP24.25■■□□□ 1.47
CDK16-210ENST00000517997 NESP48681 1621 aa24.17■■□□□ 1.46
CDK16-210ENST00000517997 LAMC3Q9Y6N6 1575 aa24.16■■□□□ 1.46
CDK16-210ENST00000517997 ERCC6Q03468 1493 aa24.09■■□□□ 1.45
CDK16-210ENST00000517997 CADPSQ9ULU8 1353 aa24.03■■□□□ 1.44
CDK16-210ENST00000517997 KIF21AQ7Z4S6 1674 aa23.97■■□□□ 1.43
CDK16-210ENST00000517997 PDS5BQ9NTI5 1447 aa23.95■■□□□ 1.42
CDK16-210ENST00000517997 CCDC88BA6NC98 1476 aa23.92■■□□□ 1.42
CDK16-210ENST00000517997 CFTRP13569 1480 aa23.9■■□□□ 1.42
CDK16-210ENST00000517997 PRDM2Q13029 1718 aa23.87■■□□□ 1.41
CDK16-210ENST00000517997 THOC2Q8NI27 1593 aaKnown RBP23.85■■□□□ 1.41
CDK16-210ENST00000517997 CUX2O14529 1486 aa23.84■■□□□ 1.41
CDK16-210ENST00000517997 SUPT5HO00267 1087 aaKnown RBP23.79■■□□□ 1.4
CDK16-210ENST00000517997 FANCD2Q9BXW9 1451 aa23.77■■□□□ 1.4
CDK16-210ENST00000517997 CEP164Q9UPV0 1460 aa23.75■■□□□ 1.39
CDK16-210ENST00000517997 MRC2Q9UBG0 1479 aa23.71■■□□□ 1.39
CDK16-210ENST00000517997 WDR62O43379 1518 aa23.65■■□□□ 1.38
CDK16-210ENST00000517997 URB2Q14146 1524 aaKnown RBP23.54■■□□□ 1.36
CDK16-210ENST00000517997 ABCC8Q09428 1581 aa23.41■■□□□ 1.34
CDK16-210ENST00000517997 TOPBP1Q92547 1522 aa23.4■■□□□ 1.34
CDK16-210ENST00000517997 DNMBPQ6XZF7 1577 aa23.4■■□□□ 1.34
CDK16-210ENST00000517997 IFT140Q96RY7 1462 aa23.25■■□□□ 1.31
CDK16-210ENST00000517997 CUX1P39880 1505 aa23.23■■□□□ 1.31
CDK16-210ENST00000517997 POLA1P09884 1462 aaPredicted RBP23.19■■□□□ 1.3
CDK16-210ENST00000517997 TARBP1Q13395 1621 aaKnown RBP23.17■■□□□ 1.3
CDK16-210ENST00000517997 FGD5Q6ZNL6 1462 aa23.14■■□□□ 1.29
CDK16-210ENST00000517997 ZNF608Q9ULD9 1512 aaPredicted RBP23.13■■□□□ 1.29
CDK16-210ENST00000517997 EIF4G3O43432 1585 aaKnown RBP23.1■■□□□ 1.29
CDK16-210ENST00000517997 BIVM-ERCC5R4GMW8 1640 aa23.08■■□□□ 1.28
CDK16-210ENST00000517997 SOGA1O94964 1423 aa23.08■■□□□ 1.28
CDK16-210ENST00000517997 RAD54L2Q9Y4B4 1467 aa23.07■■□□□ 1.28
CDK16-210ENST00000517997 WRNQ14191 1432 aaPredicted RBP eCLIP23.06■■□□□ 1.28
CDK16-210ENST00000517997 TOP2BQ02880 1626 aa23.05■■□□□ 1.28
CDK16-210ENST00000517997 DNAJC5Q9H3Z4 198 aa23.05■■□□□ 1.28
CDK16-210ENST00000517997 SYNJ1O43426 1573 aa23.03■■□□□ 1.28
CDK16-210ENST00000517997 WDR97A6NE52 1622 aa23.02■■□□□ 1.28
CDK16-210ENST00000517997 AQRO60306 1485 aaKnown RBP eCLIP22.98■■□□□ 1.273e-10■■■■■ 43
CDK16-210ENST00000517997 TDRD9Q8NDG6 1382 aaKnown RBP22.93■■□□□ 1.26
CDK16-210ENST00000517997 ABCA10Q8WWZ4 1543 aa22.92■■□□□ 1.26
CDK16-210ENST00000517997 PBRM1Q86U86 1689 aa22.87■■□□□ 1.25
CDK16-210ENST00000517997 ABCA5Q8WWZ7 1642 aa22.86■■□□□ 1.25
CDK16-210ENST00000517997 CHD1O14646 1710 aa22.85■■□□□ 1.25
CDK16-210ENST00000517997 GAPVD1Q14C86 1478 aa22.84■■□□□ 1.25
CDK16-210ENST00000517997 GRIN2BQ13224 1484 aa22.83■■□□□ 1.25
CDK16-210ENST00000517997 OSCARQ8IYS5 282 aa22.81■■□□□ 1.24
CDK16-210ENST00000517997 SNAPC4Q5SXM2 1469 aa22.79■■□□□ 1.24
CDK16-210ENST00000517997 MAGI1Q96QZ7 1491 aaPredicted RBP22.79■■□□□ 1.24
CDK16-210ENST00000517997 FBLN2P98095 1184 aa22.7■■□□□ 1.22
CDK16-210ENST00000517997 SYNJ2O15056 1496 aa22.68■■□□□ 1.22
CDK16-210ENST00000517997 ERICH3Q5RHP9 1530 aa22.67■■□□□ 1.22
CDK16-210ENST00000517997 ADAMTS12P58397 1594 aa22.64■■□□□ 1.22
CDK16-210ENST00000517997 CHMP7Q8WUX9 453 aaPredicted RBP22.64■■□□□ 1.21
CDK16-210ENST00000517997 KIF27Q86VH2 1401 aa22.58■■□□□ 1.21
CDK16-210ENST00000517997 FHAD1B1AJZ9 1412 aa22.57■■□□□ 1.2
CDK16-210ENST00000517997 GRIN2AQ12879 1464 aa22.54■■□□□ 1.2
CDK16-210ENST00000517997 CLASP1Q7Z460 1538 aa22.54■■□□□ 1.2
CDK16-210ENST00000517997 RIMBP3CA6NJZ7 1639 aa22.51■■□□□ 1.19
CDK16-210ENST00000517997 RIMBP3BA6NNM3 1639 aa22.51■■□□□ 1.19
CDK16-210ENST00000517997 RIMBP3Q9UFD9 1639 aa22.51■■□□□ 1.19
CDK16-210ENST00000517997 CUL7Q14999 1698 aa22.49■■□□□ 1.19
CDK16-210ENST00000517997 ARHGEF11O15085 1522 aa22.48■■□□□ 1.19
CDK16-210ENST00000517997 TRIM41Q8WV44 630 aa22.48■■□□□ 1.19
CDK16-210ENST00000517997 IGF1RP08069 1367 aa22.46■■□□□ 1.19
CDK16-210ENST00000517997 CEP170Q5SW79 1584 aa22.44■■□□□ 1.18
CDK16-210ENST00000517997 NUP160Q12769 1436 aa22.43■■□□□ 1.18
CDK16-210ENST00000517997 RUSC2Q8N2Y8 1516 aa22.35■■□□□ 1.17
CDK16-210ENST00000517997 CARMIL1Q5VZK9 1371 aa22.34■■□□□ 1.17
CDK16-210ENST00000517997 SHROOM2Q13796 1616 aa22.31■■□□□ 1.16
CDK16-210ENST00000517997 ARAP1Q96P48 1450 aa22.28■■□□□ 1.16
CDK16-210ENST00000517997 RAPGEF2Q9Y4G8 1499 aa22.22■■□□□ 1.15
CDK16-210ENST00000517997 CYB5RLQ6IPT4 315 aa22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms