RNA–Protein interactions for RNA: ENST00000517882.1

CREBRF-202, Transcript of CREB3 regulatory factor, humanhuman

TSL 4

Gene CREBRF, Length 544 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CREBRF-202ENST00000517882 NISCHQ9Y2I1 1504 aa42.6■■■■■ 4.41
CREBRF-202ENST00000517882 ABCC9O60706 1549 aa38.83■■■■□ 3.81
CREBRF-202ENST00000517882 CCDC180Q9P1Z9 1646 aa38.38■■■■□ 3.74
CREBRF-202ENST00000517882 DNAJC5BQ9UF47 199 aa37.08■■■■□ 3.53
CREBRF-202ENST00000517882 RB1CC1Q8TDY2 1594 aa36.73■■■■□ 3.47
CREBRF-202ENST00000517882 NACADO15069 1562 aa36.35■■■■□ 3.41
CREBRF-202ENST00000517882 DCAF8L2P0C7V8 631 aa36.2■■■■□ 3.39
CREBRF-202ENST00000517882 PABPN1Q86U42 306 aaKnown RBP eCLIP36.08■■■■□ 3.37
CREBRF-202ENST00000517882 UNC13AQ9UPW8 1703 aa35.93■■■■□ 3.34
CREBRF-202ENST00000517882 BICRAQ9NZM4 1560 aa35.68■■■■□ 3.3
CREBRF-202ENST00000517882 MYO15BQ96JP2 1530 aa35.67■■■■□ 3.3
CREBRF-202ENST00000517882 ZCCHC6Q5VYS8 1495 aaKnown RBP35.24■■■■□ 3.23
CREBRF-202ENST00000517882 DCAF1Q9Y4B6 1507 aa35.1■■■■□ 3.21
CREBRF-202ENST00000517882 SHROOM4Q9ULL8 1493 aa35.09■■■■□ 3.21
CREBRF-202ENST00000517882 SCRIBQ14160 1630 aa35.06■■■■□ 3.2
CREBRF-202ENST00000517882 CC2D2AQ9P2K1 1620 aa35.03■■■■□ 3.2
CREBRF-202ENST00000517882 CECR2Q9BXF3 1484 aa34.98■■■■□ 3.19
CREBRF-202ENST00000517882 EIF4G1Q04637 1599 aaKnown RBP34.85■■■■□ 3.17
CREBRF-202ENST00000517882 DNAJC5Q9H3Z4 198 aa34.78■■■■□ 3.16
CREBRF-202ENST00000517882 CUX2O14529 1486 aa33.63■■■□□ 2.97
CREBRF-202ENST00000517882 NCAPD3P42695 1498 aa33.55■■■□□ 2.96
CREBRF-202ENST00000517882 ERCC6Q03468 1493 aa33.55■■■□□ 2.96
CREBRF-202ENST00000517882 ATAD2BQ9ULI0 1458 aa33.44■■■□□ 2.94
CREBRF-202ENST00000517882 SMARCA4P51532 1647 aa33.34■■■□□ 2.93
CREBRF-202ENST00000517882 SMARCA2P51531 1590 aa33.32■■■□□ 2.92
CREBRF-202ENST00000517882 HMGXB3Q12766 1538 aa33.3■■■□□ 2.92
CREBRF-202ENST00000517882 NESP48681 1621 aa33.25■■■□□ 2.91
CREBRF-202ENST00000517882 BAZ1BQ9UIG0 1483 aaKnown RBP33.13■■■□□ 2.89
CREBRF-202ENST00000517882 BAZ1AQ9NRL2 1556 aaPredicted RBP33.09■■■□□ 2.89
CREBRF-202ENST00000517882 THOC2Q8NI27 1593 aaKnown RBP32.96■■■□□ 2.87
CREBRF-202ENST00000517882 PEG3Q9GZU2 1588 aa32.95■■■□□ 2.86
CREBRF-202ENST00000517882 TRIM41Q8WV44 630 aa32.93■■■□□ 2.86
CREBRF-202ENST00000517882 LAMC3Q9Y6N6 1575 aa32.88■■■□□ 2.85
CREBRF-202ENST00000517882 MROH2BQ7Z745 1585 aa32.86■■■□□ 2.85
CREBRF-202ENST00000517882 KIF21AQ7Z4S6 1674 aa32.81■■■□□ 2.84
CREBRF-202ENST00000517882 PDS5BQ9NTI5 1447 aa32.7■■■□□ 2.83
CREBRF-202ENST00000517882 CADPSQ9ULU8 1353 aa32.53■■■□□ 2.8
CREBRF-202ENST00000517882 MRC2Q9UBG0 1479 aa32.48■■■□□ 2.79
CREBRF-202ENST00000517882 WIZO95785 1651 aa32.46■■■□□ 2.79
CREBRF-202ENST00000517882 WDR62O43379 1518 aa32.41■■■□□ 2.78
CREBRF-202ENST00000517882 CEP164Q9UPV0 1460 aa32.29■■■□□ 2.76
CREBRF-202ENST00000517882 FANCD2Q9BXW9 1451 aa32.22■■■□□ 2.75
CREBRF-202ENST00000517882 CFTRP13569 1480 aa32.09■■■□□ 2.73
CREBRF-202ENST00000517882 RSF1Q96T23 1441 aaPredicted RBP32.01■■■□□ 2.72
CREBRF-202ENST00000517882 TOP2AP11388 1531 aaKnown RBP32■■■□□ 2.71
CREBRF-202ENST00000517882 URB2Q14146 1524 aaKnown RBP31.98■■■□□ 2.71
CREBRF-202ENST00000517882 OSCARQ8IYS5 282 aa31.93■■■□□ 2.7
CREBRF-202ENST00000517882 PRDM2Q13029 1718 aa31.77■■■□□ 2.68
CREBRF-202ENST00000517882 RIMBP3CA6NJZ7 1639 aa31.71■■■□□ 2.67
CREBRF-202ENST00000517882 RIMBP3BA6NNM3 1639 aa31.71■■■□□ 2.67
CREBRF-202ENST00000517882 RIMBP3Q9UFD9 1639 aa31.71■■■□□ 2.67
CREBRF-202ENST00000517882 ZNF608Q9ULD9 1512 aaPredicted RBP31.67■■■□□ 2.66
CREBRF-202ENST00000517882 CCDC88BA6NC98 1476 aa31.64■■■□□ 2.66
CREBRF-202ENST00000517882 IFT140Q96RY7 1462 aa31.63■■■□□ 2.65
CREBRF-202ENST00000517882 TOPBP1Q92547 1522 aa31.56■■■□□ 2.64
CREBRF-202ENST00000517882 EIF4G3O43432 1585 aaKnown RBP31.49■■■□□ 2.63
CREBRF-202ENST00000517882 ARHGEF11O15085 1522 aa31.49■■■□□ 2.63
CREBRF-202ENST00000517882 DNMBPQ6XZF7 1577 aa31.41■■■□□ 2.62
CREBRF-202ENST00000517882 ABCC8Q09428 1581 aa31.39■■■□□ 2.61
CREBRF-202ENST00000517882 CHD1O14646 1710 aa31.32■■■□□ 2.61
CREBRF-202ENST00000517882 AQRO60306 1485 aaKnown RBP eCLIP31.32■■■□□ 2.6
CREBRF-202ENST00000517882 TARBP1Q13395 1621 aaKnown RBP31.3■■■□□ 2.6
CREBRF-202ENST00000517882 TRHP20396 242 aaPredicted RBP31.29■■■□□ 2.6
CREBRF-202ENST00000517882 CYB5RLQ6IPT4 315 aa31.26■■■□□ 2.59
CREBRF-202ENST00000517882 FBLN2P98095 1184 aa31.22■■■□□ 2.59
CREBRF-202ENST00000517882 POLA1P09884 1462 aaPredicted RBP31.21■■■□□ 2.59
CREBRF-202ENST00000517882 AEBP2Q6ZN18 517 aaPredicted RBP31.16■■■□□ 2.58
CREBRF-202ENST00000517882 ARAP1Q96P48 1450 aa31.15■■■□□ 2.58
CREBRF-202ENST00000517882 RAD54L2Q9Y4B4 1467 aa31.14■■■□□ 2.57
CREBRF-202ENST00000517882 TDRD9Q8NDG6 1382 aaKnown RBP31.07■■■□□ 2.56
CREBRF-202ENST00000517882 SOGA1O94964 1423 aa31.05■■■□□ 2.56
CREBRF-202ENST00000517882 SNAPC4Q5SXM2 1469 aa31.01■■■□□ 2.56
CREBRF-202ENST00000517882 FGD5Q6ZNL6 1462 aa30.99■■■□□ 2.55
CREBRF-202ENST00000517882 CLASP1Q7Z460 1538 aa30.91■■■□□ 2.54
CREBRF-202ENST00000517882 CUX1P39880 1505 aa30.9■■■□□ 2.54
CREBRF-202ENST00000517882 WDR97A6NE52 1622 aa30.9■■■□□ 2.54
CREBRF-202ENST00000517882 CHMP7Q8WUX9 453 aaPredicted RBP30.87■■■□□ 2.53
CREBRF-202ENST00000517882 SYNJ1O43426 1573 aa30.87■■■□□ 2.53
CREBRF-202ENST00000517882 MAGI1Q96QZ7 1491 aaPredicted RBP30.85■■■□□ 2.53
CREBRF-202ENST00000517882 GRIN2BQ13224 1484 aa30.82■■■□□ 2.53
CREBRF-202ENST00000517882 SYNJ2O15056 1496 aa30.76■■■□□ 2.52
CREBRF-202ENST00000517882 PBRM1Q86U86 1689 aa30.73■■■□□ 2.51
CREBRF-202ENST00000517882 GAPVD1Q14C86 1478 aa30.68■■■□□ 2.5
CREBRF-202ENST00000517882 ABCA5Q8WWZ7 1642 aa30.59■■■□□ 2.49
CREBRF-202ENST00000517882 ABCA10Q8WWZ4 1543 aa30.57■■■□□ 2.48
CREBRF-202ENST00000517882 ERCC6L2Q5T890 1561 aa30.45■■■□□ 2.47
CREBRF-202ENST00000517882 GRIN2AQ12879 1464 aa30.44■■■□□ 2.46
CREBRF-202ENST00000517882 ADAMTS12P58397 1594 aa30.41■■■□□ 2.46
CREBRF-202ENST00000517882 SUPT5HO00267 1087 aaKnown RBP30.4■■■□□ 2.46
CREBRF-202ENST00000517882 CEP170Q5SW79 1584 aa30.38■■■□□ 2.45
CREBRF-202ENST00000517882 WRNQ14191 1432 aaPredicted RBP eCLIP30.38■■■□□ 2.45
CREBRF-202ENST00000517882 NUP160Q12769 1436 aa30.32■■■□□ 2.44
CREBRF-202ENST00000517882 BIVM-ERCC5R4GMW8 1640 aa30.29■■■□□ 2.44
CREBRF-202ENST00000517882 TOP2BQ02880 1626 aa30.28■■■□□ 2.44
CREBRF-202ENST00000517882 FHAD1B1AJZ9 1412 aa30.26■■■□□ 2.43
CREBRF-202ENST00000517882 SHROOM2Q13796 1616 aa30.25■■■□□ 2.43
CREBRF-202ENST00000517882 ERICH3Q5RHP9 1530 aa30.17■■■□□ 2.42
CREBRF-202ENST00000517882 PRG4Q92954 1404 aaPredicted RBP30.1■■■□□ 2.41
CREBRF-202ENST00000517882 KIF13AQ9H1H9 1805 aa30.06■■■□□ 2.4
CREBRF-202ENST00000517882 RUSC2Q8N2Y8 1516 aa30■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms