RNA–Protein interactions for RNA: ENST00000517791.1

CD74-205, Transcript of CD74 molecule, humanhuman

TSL 3

Gene CD74, Length 1,015 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD74-205ENST00000517791 NISCHQ9Y2I1 1504 aa32.31■■■□□ 2.76
CD74-205ENST00000517791 CCDC180Q9P1Z9 1646 aa28.96■■■□□ 2.23
CD74-205ENST00000517791 ABCC9O60706 1549 aa28.89■■■□□ 2.21
CD74-205ENST00000517791 DNAJC5BQ9UF47 199 aa27.53■■■□□ 2
CD74-205ENST00000517791 RB1CC1Q8TDY2 1594 aa27.45■■□□□ 1.99
CD74-205ENST00000517791 NACADO15069 1562 aa27.3■■□□□ 1.96
CD74-205ENST00000517791 DCAF8L2P0C7V8 631 aa27.25■■□□□ 1.95
CD74-205ENST00000517791 MYO15BQ96JP2 1530 aa26.95■■□□□ 1.91
CD74-205ENST00000517791 PABPN1Q86U42 306 aaKnown RBP eCLIP26.82■■□□□ 1.88
CD74-205ENST00000517791 UNC13AQ9UPW8 1703 aa26.82■■□□□ 1.88
CD74-205ENST00000517791 ZCCHC6Q5VYS8 1495 aaKnown RBP26.81■■□□□ 1.88
CD74-205ENST00000517791 DCAF1Q9Y4B6 1507 aa26.7■■□□□ 1.86
CD74-205ENST00000517791 BICRAQ9NZM4 1560 aa26.57■■□□□ 1.84
CD74-205ENST00000517791 SCRIBQ14160 1630 aa26.39■■□□□ 1.82
CD74-205ENST00000517791 SHROOM4Q9ULL8 1493 aa26.29■■□□□ 1.8
CD74-205ENST00000517791 CC2D2AQ9P2K1 1620 aa26.07■■□□□ 1.76
CD74-205ENST00000517791 CECR2Q9BXF3 1484 aa26.06■■□□□ 1.76
CD74-205ENST00000517791 EIF4G1Q04637 1599 aaKnown RBP25.92■■□□□ 1.74
CD74-205ENST00000517791 DNAJC5Q9H3Z4 198 aa25.56■■□□□ 1.68
CD74-205ENST00000517791 SMARCA4P51532 1647 aa25.18■■□□□ 1.62
CD74-205ENST00000517791 NCAPD3P42695 1498 aa25.13■■□□□ 1.61
CD74-205ENST00000517791 SMARCA2P51531 1590 aa25.12■■□□□ 1.61
CD74-205ENST00000517791 BAZ1AQ9NRL2 1556 aaPredicted RBP25.11■■□□□ 1.61
CD74-205ENST00000517791 ATAD2BQ9ULI0 1458 aa25.09■■□□□ 1.61
CD74-205ENST00000517791 CUX2O14529 1486 aa25.08■■□□□ 1.6
CD74-205ENST00000517791 HMGXB3Q12766 1538 aa25.02■■□□□ 1.6
CD74-205ENST00000517791 ERCC6Q03468 1493 aa24.94■■□□□ 1.58
CD74-205ENST00000517791 BAZ1BQ9UIG0 1483 aaKnown RBP24.94■■□□□ 1.58
CD74-205ENST00000517791 PEG3Q9GZU2 1588 aa24.89■■□□□ 1.58
CD74-205ENST00000517791 MROH2BQ7Z745 1585 aa24.88■■□□□ 1.57
CD74-205ENST00000517791 NESP48681 1621 aa24.72■■□□□ 1.55
CD74-205ENST00000517791 WIZO95785 1651 aa24.63■■□□□ 1.53
CD74-205ENST00000517791 LAMC3Q9Y6N6 1575 aa24.6■■□□□ 1.53
CD74-205ENST00000517791 THOC2Q8NI27 1593 aaKnown RBP24.55■■□□□ 1.52
CD74-205ENST00000517791 PDS5BQ9NTI5 1447 aa24.45■■□□□ 1.51
CD74-205ENST00000517791 RSF1Q96T23 1441 aaPredicted RBP24.44■■□□□ 1.5
CD74-205ENST00000517791 KIF21AQ7Z4S6 1674 aa24.43■■□□□ 1.5
CD74-205ENST00000517791 CADPSQ9ULU8 1353 aa24.4■■□□□ 1.5
CD74-205ENST00000517791 TOP2AP11388 1531 aaKnown RBP24.35■■□□□ 1.49
CD74-205ENST00000517791 MRC2Q9UBG0 1479 aa24.21■■□□□ 1.47
CD74-205ENST00000517791 TRIM41Q8WV44 630 aa24.21■■□□□ 1.47
CD74-205ENST00000517791 CEP164Q9UPV0 1460 aa24.19■■□□□ 1.46
CD74-205ENST00000517791 CFTRP13569 1480 aa24.16■■□□□ 1.46
CD74-205ENST00000517791 FANCD2Q9BXW9 1451 aa24.15■■□□□ 1.46
CD74-205ENST00000517791 WDR62O43379 1518 aa24.12■■□□□ 1.45
CD74-205ENST00000517791 PRDM2Q13029 1718 aa24.07■■□□□ 1.44
CD74-205ENST00000517791 CCDC88BA6NC98 1476 aa24.02■■□□□ 1.44
CD74-205ENST00000517791 URB2Q14146 1524 aaKnown RBP23.89■■□□□ 1.42
CD74-205ENST00000517791 OSCARQ8IYS5 282 aa23.82■■□□□ 1.4
CD74-205ENST00000517791 ABCC8Q09428 1581 aa23.74■■□□□ 1.39
CD74-205ENST00000517791 TOPBP1Q92547 1522 aa23.71■■□□□ 1.39
CD74-205ENST00000517791 IFT140Q96RY7 1462 aa23.68■■□□□ 1.38
CD74-205ENST00000517791 DNMBPQ6XZF7 1577 aa23.67■■□□□ 1.38
CD74-205ENST00000517791 SUPT5HO00267 1087 aaKnown RBP23.62■■□□□ 1.37
CD74-205ENST00000517791 RIMBP3CA6NJZ7 1639 aa23.59■■□□□ 1.37
CD74-205ENST00000517791 RIMBP3BA6NNM3 1639 aa23.59■■□□□ 1.37
CD74-205ENST00000517791 RIMBP3Q9UFD9 1639 aa23.59■■□□□ 1.37
CD74-205ENST00000517791 ZNF608Q9ULD9 1512 aaPredicted RBP23.55■■□□□ 1.36
CD74-205ENST00000517791 EIF4G3O43432 1585 aaKnown RBP23.51■■□□□ 1.35
CD74-205ENST00000517791 ARHGEF11O15085 1522 aa23.49■■□□□ 1.35
CD74-205ENST00000517791 POLA1P09884 1462 aaPredicted RBP23.47■■□□□ 1.35
CD74-205ENST00000517791 TARBP1Q13395 1621 aaKnown RBP23.47■■□□□ 1.35
CD74-205ENST00000517791 SOGA1O94964 1423 aa23.4■■□□□ 1.34
CD74-205ENST00000517791 AQRO60306 1485 aaKnown RBP eCLIP23.38■■□□□ 1.33
CD74-205ENST00000517791 FGD5Q6ZNL6 1462 aa23.38■■□□□ 1.33
CD74-205ENST00000517791 CUX1P39880 1505 aa23.37■■□□□ 1.33
CD74-205ENST00000517791 RAD54L2Q9Y4B4 1467 aa23.36■■□□□ 1.33
CD74-205ENST00000517791 CHD1O14646 1710 aa23.32■■□□□ 1.32
CD74-205ENST00000517791 WDR97A6NE52 1622 aa23.32■■□□□ 1.32
CD74-205ENST00000517791 CYB5RLQ6IPT4 315 aa23.31■■□□□ 1.32
CD74-205ENST00000517791 TDRD9Q8NDG6 1382 aaKnown RBP23.29■■□□□ 1.32
CD74-205ENST00000517791 FBLN2P98095 1184 aa23.28■■□□□ 1.32
CD74-205ENST00000517791 ARAP1Q96P48 1450 aa23.24■■□□□ 1.31
CD74-205ENST00000517791 SNAPC4Q5SXM2 1469 aa23.19■■□□□ 1.3
CD74-205ENST00000517791 GRIN2BQ13224 1484 aa23.17■■□□□ 1.3
CD74-205ENST00000517791 MAGI1Q96QZ7 1491 aaPredicted RBP23.17■■□□□ 1.3
CD74-205ENST00000517791 PBRM1Q86U86 1689 aa23.16■■□□□ 1.3
CD74-205ENST00000517791 TRHP20396 242 aaPredicted RBP23.14■■□□□ 1.29
CD74-205ENST00000517791 CHMP7Q8WUX9 453 aaPredicted RBP23.13■■□□□ 1.29
CD74-205ENST00000517791 GAPVD1Q14C86 1478 aa23.12■■□□□ 1.29
CD74-205ENST00000517791 ABCA10Q8WWZ4 1543 aa23.12■■□□□ 1.29
CD74-205ENST00000517791 WRNQ14191 1432 aaPredicted RBP eCLIP23.11■■□□□ 1.29
CD74-205ENST00000517791 BIVM-ERCC5R4GMW8 1640 aa23.11■■□□□ 1.29
CD74-205ENST00000517791 TOP2BQ02880 1626 aa23.1■■□□□ 1.29
CD74-205ENST00000517791 SYNJ1O43426 1573 aa23.08■■□□□ 1.29
CD74-205ENST00000517791 ABCA5Q8WWZ7 1642 aa23.08■■□□□ 1.28
CD74-205ENST00000517791 SYNJ2O15056 1496 aa23.06■■□□□ 1.28
CD74-205ENST00000517791 CLASP1Q7Z460 1538 aa23.01■■□□□ 1.27
CD74-205ENST00000517791 ADAMTS12P58397 1594 aa22.9■■□□□ 1.26
CD74-205ENST00000517791 GRIN2AQ12879 1464 aa22.86■■□□□ 1.25
CD74-205ENST00000517791 ERICH3Q5RHP9 1530 aa22.86■■□□□ 1.25
CD74-205ENST00000517791 FHAD1B1AJZ9 1412 aa22.84■■□□□ 1.25
CD74-205ENST00000517791 AEBP2Q6ZN18 517 aaPredicted RBP22.77■■□□□ 1.24
CD74-205ENST00000517791 CEP170Q5SW79 1584 aa22.76■■□□□ 1.23
CD74-205ENST00000517791 NUP160Q12769 1436 aa22.74■■□□□ 1.23
CD74-205ENST00000517791 KIF27Q86VH2 1401 aa22.68■■□□□ 1.22
CD74-205ENST00000517791 SHROOM2Q13796 1616 aa22.64■■□□□ 1.22
CD74-205ENST00000517791 CUL7Q14999 1698 aa22.63■■□□□ 1.21
CD74-205ENST00000517791 ERCC6L2Q5T890 1561 aa22.63■■□□□ 1.21
CD74-205ENST00000517791 RUSC2Q8N2Y8 1516 aa22.57■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms