RNA–Protein interactions for RNA: ENST00000517752.5

CD74-204, Transcript of CD74 molecule, humanhuman

TSL 2

Gene CD74, Length 816 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD74-204ENST00000517752 NISCHQ9Y2I1 1504 aa38.16■■■■□ 3.7
CD74-204ENST00000517752 CCDC180Q9P1Z9 1646 aa34.08■■■■□ 3.05
CD74-204ENST00000517752 ABCC9O60706 1549 aa33.18■■■□□ 2.9
CD74-204ENST00000517752 RB1CC1Q8TDY2 1594 aa32.05■■■□□ 2.72
CD74-204ENST00000517752 NACADO15069 1562 aa32■■■□□ 2.71
CD74-204ENST00000517752 MYO15BQ96JP2 1530 aa31.82■■■□□ 2.68
CD74-204ENST00000517752 ZCCHC6Q5VYS8 1495 aaKnown RBP31.79■■■□□ 2.68
CD74-204ENST00000517752 DCAF8L2P0C7V8 631 aa31.77■■■□□ 2.68
CD74-204ENST00000517752 DCAF1Q9Y4B6 1507 aa31.65■■■□□ 2.66
CD74-204ENST00000517752 UNC13AQ9UPW8 1703 aa31.29■■■□□ 2.6
CD74-204ENST00000517752 BICRAQ9NZM4 1560 aa30.96■■■□□ 2.55
CD74-204ENST00000517752 SCRIBQ14160 1630 aa30.95■■■□□ 2.55
CD74-204ENST00000517752 PABPN1Q86U42 306 aaKnown RBP eCLIP30.9■■■□□ 2.54
CD74-204ENST00000517752 SHROOM4Q9ULL8 1493 aa30.82■■■□□ 2.53
CD74-204ENST00000517752 DNAJC5BQ9UF47 199 aa30.32■■■□□ 2.44
CD74-204ENST00000517752 EIF4G1Q04637 1599 aaKnown RBP30.2■■■□□ 2.42
CD74-204ENST00000517752 CC2D2AQ9P2K1 1620 aa30.07■■■□□ 2.4
CD74-204ENST00000517752 CECR2Q9BXF3 1484 aa29.86■■■□□ 2.37
CD74-204ENST00000517752 SMARCA4P51532 1647 aa29.65■■■□□ 2.34
CD74-204ENST00000517752 BAZ1AQ9NRL2 1556 aaPredicted RBP29.64■■■□□ 2.34
CD74-204ENST00000517752 SMARCA2P51531 1590 aa29.51■■■□□ 2.31
CD74-204ENST00000517752 NCAPD3P42695 1498 aa29.46■■■□□ 2.31
CD74-204ENST00000517752 ATAD2BQ9ULI0 1458 aa29.44■■■□□ 2.3
CD74-204ENST00000517752 PEG3Q9GZU2 1588 aa29.39■■■□□ 2.3
CD74-204ENST00000517752 HMGXB3Q12766 1538 aa29.39■■■□□ 2.3
CD74-204ENST00000517752 MROH2BQ7Z745 1585 aa29.35■■■□□ 2.29
CD74-204ENST00000517752 BAZ1BQ9UIG0 1483 aaKnown RBP29.25■■■□□ 2.27
CD74-204ENST00000517752 WIZO95785 1651 aa29.06■■■□□ 2.24
CD74-204ENST00000517752 RSF1Q96T23 1441 aaPredicted RBP29■■■□□ 2.23
CD74-204ENST00000517752 TOP2AP11388 1531 aaKnown RBP28.81■■■□□ 2.2
CD74-204ENST00000517752 LAMC3Q9Y6N6 1575 aa28.76■■■□□ 2.19
CD74-204ENST00000517752 ERCC6Q03468 1493 aa28.69■■■□□ 2.18
CD74-204ENST00000517752 NESP48681 1621 aa28.66■■■□□ 2.18
CD74-204ENST00000517752 CADPSQ9ULU8 1353 aa28.58■■■□□ 2.17
CD74-204ENST00000517752 PDS5BQ9NTI5 1447 aa28.53■■■□□ 2.16
CD74-204ENST00000517752 KIF21AQ7Z4S6 1674 aa28.45■■■□□ 2.15
CD74-204ENST00000517752 CUX2O14529 1486 aa28.43■■■□□ 2.14
CD74-204ENST00000517752 CFTRP13569 1480 aa28.41■■■□□ 2.14
CD74-204ENST00000517752 CCDC88BA6NC98 1476 aa28.39■■■□□ 2.13
CD74-204ENST00000517752 PRDM2Q13029 1718 aa28.37■■■□□ 2.13
CD74-204ENST00000517752 THOC2Q8NI27 1593 aaKnown RBP28.36■■■□□ 2.13
CD74-204ENST00000517752 CEP164Q9UPV0 1460 aa28.27■■■□□ 2.12
CD74-204ENST00000517752 FANCD2Q9BXW9 1451 aa28.27■■■□□ 2.12
CD74-204ENST00000517752 MRC2Q9UBG0 1479 aa28.22■■■□□ 2.11
CD74-204ENST00000517752 SUPT5HO00267 1087 aaKnown RBP28.18■■■□□ 2.1
CD74-204ENST00000517752 WDR62O43379 1518 aa28.14■■■□□ 2.1
CD74-204ENST00000517752 URB2Q14146 1524 aaKnown RBP27.94■■■□□ 2.06
CD74-204ENST00000517752 ABCC8Q09428 1581 aa27.9■■■□□ 2.06
CD74-204ENST00000517752 DNMBPQ6XZF7 1577 aa27.82■■■□□ 2.04
CD74-204ENST00000517752 TOPBP1Q92547 1522 aa27.81■■■□□ 2.04
CD74-204ENST00000517752 IFT140Q96RY7 1462 aa27.68■■■□□ 2.02
CD74-204ENST00000517752 POLA1P09884 1462 aaPredicted RBP27.56■■■□□ 2
CD74-204ENST00000517752 CUX1P39880 1505 aa27.56■■■□□ 2
CD74-204ENST00000517752 TARBP1Q13395 1621 aaKnown RBP27.52■■■□□ 2
CD74-204ENST00000517752 FGD5Q6ZNL6 1462 aa27.49■■□□□ 1.99
CD74-204ENST00000517752 DNAJC5Q9H3Z4 198 aa27.46■■□□□ 1.99
CD74-204ENST00000517752 EIF4G3O43432 1585 aaKnown RBP27.45■■□□□ 1.99
CD74-204ENST00000517752 ZNF608Q9ULD9 1512 aaPredicted RBP27.45■■□□□ 1.98
CD74-204ENST00000517752 WDR97A6NE52 1622 aa27.45■■□□□ 1.98
CD74-204ENST00000517752 SOGA1O94964 1423 aa27.43■■□□□ 1.98
CD74-204ENST00000517752 BIVM-ERCC5R4GMW8 1640 aa27.41■■□□□ 1.98
CD74-204ENST00000517752 WRNQ14191 1432 aaPredicted RBP eCLIP27.41■■□□□ 1.98
CD74-204ENST00000517752 TOP2BQ02880 1626 aa27.39■■□□□ 1.98
CD74-204ENST00000517752 RAD54L2Q9Y4B4 1467 aa27.38■■□□□ 1.97
CD74-204ENST00000517752 SYNJ1O43426 1573 aa27.31■■□□□ 1.96
CD74-204ENST00000517752 AQRO60306 1485 aaKnown RBP eCLIP27.29■■□□□ 1.96
CD74-204ENST00000517752 ABCA10Q8WWZ4 1543 aa27.26■■□□□ 1.95
CD74-204ENST00000517752 TDRD9Q8NDG6 1382 aaKnown RBP27.22■■□□□ 1.95
CD74-204ENST00000517752 ABCA5Q8WWZ7 1642 aa27.17■■□□□ 1.94
CD74-204ENST00000517752 GRIN2BQ13224 1484 aa27.17■■□□□ 1.94
CD74-204ENST00000517752 PBRM1Q86U86 1689 aa27.17■■□□□ 1.94
CD74-204ENST00000517752 OSCARQ8IYS5 282 aa27.16■■□□□ 1.94
CD74-204ENST00000517752 GAPVD1Q14C86 1478 aa27.14■■□□□ 1.94
CD74-204ENST00000517752 MAGI1Q96QZ7 1491 aaPredicted RBP27.13■■□□□ 1.93
CD74-204ENST00000517752 CHD1O14646 1710 aa27.13■■□□□ 1.93
CD74-204ENST00000517752 SNAPC4Q5SXM2 1469 aa27.09■■□□□ 1.93
CD74-204ENST00000517752 SYNJ2O15056 1496 aa27■■□□□ 1.91
CD74-204ENST00000517752 FBLN2P98095 1184 aa26.98■■□□□ 1.91
CD74-204ENST00000517752 ERICH3Q5RHP9 1530 aa26.97■■□□□ 1.91
CD74-204ENST00000517752 CHMP7Q8WUX9 453 aaPredicted RBP26.94■■□□□ 1.9
CD74-204ENST00000517752 ADAMTS12P58397 1594 aa26.91■■□□□ 1.9
CD74-204ENST00000517752 KIF27Q86VH2 1401 aa26.86■■□□□ 1.89
CD74-204ENST00000517752 FHAD1B1AJZ9 1412 aa26.84■■□□□ 1.89
CD74-204ENST00000517752 GRIN2AQ12879 1464 aa26.81■■□□□ 1.88
CD74-204ENST00000517752 CLASP1Q7Z460 1538 aa26.8■■□□□ 1.88
CD74-204ENST00000517752 CUL7Q14999 1698 aa26.76■■□□□ 1.87
CD74-204ENST00000517752 RIMBP3CA6NJZ7 1639 aa26.76■■□□□ 1.87
CD74-204ENST00000517752 RIMBP3BA6NNM3 1639 aa26.76■■□□□ 1.87
CD74-204ENST00000517752 RIMBP3Q9UFD9 1639 aa26.76■■□□□ 1.87
CD74-204ENST00000517752 ARHGEF11O15085 1522 aa26.75■■□□□ 1.87
CD74-204ENST00000517752 TRIM41Q8WV44 630 aa26.69■■□□□ 1.86
CD74-204ENST00000517752 NUP160Q12769 1436 aa26.68■■□□□ 1.86
CD74-204ENST00000517752 IGF1RP08069 1367 aa26.66■■□□□ 1.86
CD74-204ENST00000517752 CEP170Q5SW79 1584 aa26.65■■□□□ 1.86
CD74-204ENST00000517752 CARMIL1Q5VZK9 1371 aa26.54■■□□□ 1.84
CD74-204ENST00000517752 SHROOM2Q13796 1616 aa26.53■■□□□ 1.84
CD74-204ENST00000517752 RUSC2Q8N2Y8 1516 aa26.52■■□□□ 1.84
CD74-204ENST00000517752 ARAP1Q96P48 1450 aa26.49■■□□□ 1.83
CD74-204ENST00000517752 KIAA0586Q9BVV6 1533 aa26.44■■□□□ 1.82
CD74-204ENST00000517752 RAPGEF2Q9Y4G8 1499 aa26.42■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms