RNA–Protein interactions for RNA: ENST00000517738.1

EXTL3-203, Transcript of exostosin like glycosyltransferase 3, humanhuman

TSL 4

Gene EXTL3, Length 529 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3-203ENST00000517738 NISCHQ9Y2I1 1504 aa32.66■■■□□ 2.82
EXTL3-203ENST00000517738 CCDC180Q9P1Z9 1646 aa29.33■■■□□ 2.29
EXTL3-203ENST00000517738 ABCC9O60706 1549 aa29.22■■■□□ 2.27
EXTL3-203ENST00000517738 RB1CC1Q8TDY2 1594 aa27.84■■■□□ 2.05
EXTL3-203ENST00000517738 NACADO15069 1562 aa27.68■■■□□ 2.02
EXTL3-203ENST00000517738 DNAJC5BQ9UF47 199 aa27.46■■□□□ 1.99
EXTL3-203ENST00000517738 MYO15BQ96JP2 1530 aa27.37■■□□□ 1.97
EXTL3-203ENST00000517738 UNC13AQ9UPW8 1703 aa27.32■■□□□ 1.96
EXTL3-203ENST00000517738 DCAF8L2P0C7V8 631 aa27.28■■□□□ 1.96
EXTL3-203ENST00000517738 BICRAQ9NZM4 1560 aa27.15■■□□□ 1.94
EXTL3-203ENST00000517738 PABPN1Q86U42 306 aaKnown RBP eCLIP27.15■■□□□ 1.94
EXTL3-203ENST00000517738 ZCCHC6Q5VYS8 1495 aaKnown RBP27.1■■□□□ 1.93
EXTL3-203ENST00000517738 DCAF1Q9Y4B6 1507 aa27.02■■□□□ 1.92
EXTL3-203ENST00000517738 SHROOM4Q9ULL8 1493 aa26.73■■□□□ 1.87
EXTL3-203ENST00000517738 SCRIBQ14160 1630 aa26.65■■□□□ 1.86
EXTL3-203ENST00000517738 CC2D2AQ9P2K1 1620 aa26.44■■□□□ 1.82
EXTL3-203ENST00000517738 EIF4G1Q04637 1599 aaKnown RBP26.41■■□□□ 1.82
EXTL3-203ENST00000517738 CECR2Q9BXF3 1484 aa26.32■■□□□ 1.8
EXTL3-203ENST00000517738 NCAPD3P42695 1498 aa25.57■■□□□ 1.68
EXTL3-203ENST00000517738 ATAD2BQ9ULI0 1458 aa25.49■■□□□ 1.67
EXTL3-203ENST00000517738 SMARCA4P51532 1647 aa25.48■■□□□ 1.67
EXTL3-203ENST00000517738 HMGXB3Q12766 1538 aa25.4■■□□□ 1.66
EXTL3-203ENST00000517738 SMARCA2P51531 1590 aa25.38■■□□□ 1.65
EXTL3-203ENST00000517738 BAZ1AQ9NRL2 1556 aaPredicted RBP25.32■■□□□ 1.64
EXTL3-203ENST00000517738 PEG3Q9GZU2 1588 aa25.29■■□□□ 1.64
EXTL3-203ENST00000517738 CUX2O14529 1486 aa25.2■■□□□ 1.62
EXTL3-203ENST00000517738 BAZ1BQ9UIG0 1483 aaKnown RBP25.18■■□□□ 1.62
EXTL3-203ENST00000517738 MROH2BQ7Z745 1585 aa25.18■■□□□ 1.62
EXTL3-203ENST00000517738 NESP48681 1621 aa25.15■■□□□ 1.62
EXTL3-203ENST00000517738 ERCC6Q03468 1493 aa25.15■■□□□ 1.62
EXTL3-203ENST00000517738 DNAJC5Q9H3Z4 198 aa25.14■■□□□ 1.62
EXTL3-203ENST00000517738 LAMC3Q9Y6N6 1575 aa24.97■■□□□ 1.59
EXTL3-203ENST00000517738 THOC2Q8NI27 1593 aaKnown RBP24.96■■□□□ 1.59
EXTL3-203ENST00000517738 WIZO95785 1651 aa24.86■■□□□ 1.57
EXTL3-203ENST00000517738 KIF21AQ7Z4S6 1674 aa24.85■■□□□ 1.57
EXTL3-203ENST00000517738 PDS5BQ9NTI5 1447 aa24.75■■□□□ 1.55
EXTL3-203ENST00000517738 CADPSQ9ULU8 1353 aa24.74■■□□□ 1.55
EXTL3-203ENST00000517738 RSF1Q96T23 1441 aaPredicted RBP24.64■■□□□ 1.54
EXTL3-203ENST00000517738 MRC2Q9UBG0 1479 aa24.59■■□□□ 1.53
EXTL3-203ENST00000517738 WDR62O43379 1518 aa24.59■■□□□ 1.53
EXTL3-203ENST00000517738 TOP2AP11388 1531 aaKnown RBP24.54■■□□□ 1.52
EXTL3-203ENST00000517738 CFTRP13569 1480 aa24.51■■□□□ 1.51
EXTL3-203ENST00000517738 CEP164Q9UPV0 1460 aa24.47■■□□□ 1.51
EXTL3-203ENST00000517738 FANCD2Q9BXW9 1451 aa24.46■■□□□ 1.51
EXTL3-203ENST00000517738 URB2Q14146 1524 aaKnown RBP24.32■■□□□ 1.48
EXTL3-203ENST00000517738 PRDM2Q13029 1718 aa24.29■■□□□ 1.48
EXTL3-203ENST00000517738 CCDC88BA6NC98 1476 aa24.25■■□□□ 1.47
EXTL3-203ENST00000517738 TOPBP1Q92547 1522 aa24.04■■□□□ 1.44
EXTL3-203ENST00000517738 ZNF608Q9ULD9 1512 aaPredicted RBP24■■□□□ 1.43
EXTL3-203ENST00000517738 IFT140Q96RY7 1462 aa24■■□□□ 1.43
EXTL3-203ENST00000517738 DNMBPQ6XZF7 1577 aa23.95■■□□□ 1.42
EXTL3-203ENST00000517738 OSCARQ8IYS5 282 aa23.94■■□□□ 1.42
EXTL3-203ENST00000517738 ABCC8Q09428 1581 aa23.92■■□□□ 1.42
EXTL3-203ENST00000517738 TRIM41Q8WV44 630 aa23.91■■□□□ 1.42
EXTL3-203ENST00000517738 TARBP1Q13395 1621 aaKnown RBP23.88■■□□□ 1.41
EXTL3-203ENST00000517738 EIF4G3O43432 1585 aaKnown RBP23.87■■□□□ 1.41
EXTL3-203ENST00000517738 POLA1P09884 1462 aaPredicted RBP23.79■■□□□ 1.4
EXTL3-203ENST00000517738 RIMBP3CA6NJZ7 1639 aa23.76■■□□□ 1.39
EXTL3-203ENST00000517738 RIMBP3BA6NNM3 1639 aa23.76■■□□□ 1.39
EXTL3-203ENST00000517738 RIMBP3Q9UFD9 1639 aa23.76■■□□□ 1.39
EXTL3-203ENST00000517738 AQRO60306 1485 aaKnown RBP eCLIP23.73■■□□□ 1.39
EXTL3-203ENST00000517738 CHD1O14646 1710 aa23.69■■□□□ 1.38
EXTL3-203ENST00000517738 RAD54L2Q9Y4B4 1467 aa23.68■■□□□ 1.38
EXTL3-203ENST00000517738 ARHGEF11O15085 1522 aa23.68■■□□□ 1.38
EXTL3-203ENST00000517738 CUX1P39880 1505 aa23.64■■□□□ 1.38
EXTL3-203ENST00000517738 FGD5Q6ZNL6 1462 aa23.63■■□□□ 1.37
EXTL3-203ENST00000517738 SOGA1O94964 1423 aa23.61■■□□□ 1.37
EXTL3-203ENST00000517738 WDR97A6NE52 1622 aa23.59■■□□□ 1.37
EXTL3-203ENST00000517738 TDRD9Q8NDG6 1382 aaKnown RBP23.57■■□□□ 1.36
EXTL3-203ENST00000517738 SNAPC4Q5SXM2 1469 aa23.5■■□□□ 1.35
EXTL3-203ENST00000517738 ARAP1Q96P48 1450 aa23.47■■□□□ 1.35
EXTL3-203ENST00000517738 CLASP1Q7Z460 1538 aa23.47■■□□□ 1.35
EXTL3-203ENST00000517738 MAGI1Q96QZ7 1491 aaPredicted RBP23.45■■□□□ 1.34
EXTL3-203ENST00000517738 GRIN2BQ13224 1484 aa23.43■■□□□ 1.34
EXTL3-203ENST00000517738 FBLN2P98095 1184 aa23.41■■□□□ 1.34
EXTL3-203ENST00000517738 PBRM1Q86U86 1689 aa23.39■■□□□ 1.34
EXTL3-203ENST00000517738 ABCA5Q8WWZ7 1642 aa23.39■■□□□ 1.33
EXTL3-203ENST00000517738 ABCA10Q8WWZ4 1543 aa23.38■■□□□ 1.33
EXTL3-203ENST00000517738 CYB5RLQ6IPT4 315 aa23.37■■□□□ 1.33
EXTL3-203ENST00000517738 SYNJ2O15056 1496 aa23.36■■□□□ 1.33
EXTL3-203ENST00000517738 SUPT5HO00267 1087 aaKnown RBP23.35■■□□□ 1.33
EXTL3-203ENST00000517738 GAPVD1Q14C86 1478 aa23.35■■□□□ 1.33
EXTL3-203ENST00000517738 SYNJ1O43426 1573 aa23.35■■□□□ 1.33
EXTL3-203ENST00000517738 BIVM-ERCC5R4GMW8 1640 aa23.3■■□□□ 1.32
EXTL3-203ENST00000517738 CHMP7Q8WUX9 453 aaPredicted RBP23.28■■□□□ 1.32
EXTL3-203ENST00000517738 TOP2BQ02880 1626 aa23.26■■□□□ 1.31
EXTL3-203ENST00000517738 WRNQ14191 1432 aaPredicted RBP eCLIP23.21■■□□□ 1.31
EXTL3-203ENST00000517738 ADAMTS12P58397 1594 aa23.19■■□□□ 1.3
EXTL3-203ENST00000517738 GRIN2AQ12879 1464 aa23.16■■□□□ 1.3
EXTL3-203ENST00000517738 NUP160Q12769 1436 aa23.12■■□□□ 1.29
EXTL3-203ENST00000517738 CEP170Q5SW79 1584 aa23.12■■□□□ 1.29
EXTL3-203ENST00000517738 ERCC6L2Q5T890 1561 aa23.1■■□□□ 1.29
EXTL3-203ENST00000517738 ERICH3Q5RHP9 1530 aa23.08■■□□□ 1.28
EXTL3-203ENST00000517738 FHAD1B1AJZ9 1412 aa23.06■■□□□ 1.28
EXTL3-203ENST00000517738 SHROOM2Q13796 1616 aa23.05■■□□□ 1.28
EXTL3-203ENST00000517738 TRHP20396 242 aaPredicted RBP23.02■■□□□ 1.28
EXTL3-203ENST00000517738 RUSC2Q8N2Y8 1516 aa22.87■■□□□ 1.25
EXTL3-203ENST00000517738 PRG4Q92954 1404 aaPredicted RBP22.81■■□□□ 1.24
EXTL3-203ENST00000517738 IGF1RP08069 1367 aa22.76■■□□□ 1.23
EXTL3-203ENST00000517738 JPH4Q96JJ6 628 aa22.76■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms