RNA–Protein interactions for RNA: ENST00000517699.2

HR-203, Transcript of HR, lysine demethylase and nuclear receptor corepressor, humanhuman

TSL 3

Gene HR, Length 772 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HR-203ENST00000517699 NISCHQ9Y2I1 1504 aa36.16■■■■□ 3.38
HR-203ENST00000517699 CCDC180Q9P1Z9 1646 aa32.34■■■□□ 2.77
HR-203ENST00000517699 ABCC9O60706 1549 aa31.6■■■□□ 2.65
HR-203ENST00000517699 RB1CC1Q8TDY2 1594 aa30.4■■■□□ 2.46
HR-203ENST00000517699 NACADO15069 1562 aa30.32■■■□□ 2.45
HR-203ENST00000517699 MYO15BQ96JP2 1530 aa30.15■■■□□ 2.42
HR-203ENST00000517699 ZCCHC6Q5VYS8 1495 aaKnown RBP30.13■■■□□ 2.41
HR-203ENST00000517699 DCAF1Q9Y4B6 1507 aa29.96■■■□□ 2.39
HR-203ENST00000517699 DCAF8L2P0C7V8 631 aa29.93■■■□□ 2.38
HR-203ENST00000517699 UNC13AQ9UPW8 1703 aa29.91■■■□□ 2.38
HR-203ENST00000517699 BICRAQ9NZM4 1560 aa29.59■■■□□ 2.33
HR-203ENST00000517699 PABPN1Q86U42 306 aaKnown RBP eCLIP29.4■■■□□ 2.3
HR-203ENST00000517699 SCRIBQ14160 1630 aa29.4■■■□□ 2.3
HR-203ENST00000517699 SHROOM4Q9ULL8 1493 aa29.22■■■□□ 2.27
HR-203ENST00000517699 DNAJC5BQ9UF47 199 aa29.21■■■□□ 2.27
HR-203ENST00000517699 EIF4G1Q04637 1599 aaKnown RBP28.75■■■□□ 2.19
HR-203ENST00000517699 CC2D2AQ9P2K1 1620 aa28.67■■■□□ 2.18
HR-203ENST00000517699 CECR2Q9BXF3 1484 aa28.41■■■□□ 2.14
HR-203ENST00000517699 SMARCA4P51532 1647 aa28.14■■■□□ 2.1
HR-203ENST00000517699 BAZ1AQ9NRL2 1556 aaPredicted RBP28.03■■■□□ 2.08
HR-203ENST00000517699 NCAPD3P42695 1498 aa27.95■■■□□ 2.07
HR-203ENST00000517699 ATAD2BQ9ULI0 1458 aa27.95■■■□□ 2.07
HR-203ENST00000517699 SMARCA2P51531 1590 aa27.93■■■□□ 2.06
HR-203ENST00000517699 PEG3Q9GZU2 1588 aa27.91■■■□□ 2.06
HR-203ENST00000517699 HMGXB3Q12766 1538 aa27.89■■■□□ 2.06
HR-203ENST00000517699 MROH2BQ7Z745 1585 aa27.87■■■□□ 2.05
HR-203ENST00000517699 BAZ1BQ9UIG0 1483 aaKnown RBP27.69■■■□□ 2.02
HR-203ENST00000517699 WIZO95785 1651 aa27.59■■■□□ 2.01
HR-203ENST00000517699 RSF1Q96T23 1441 aaPredicted RBP27.45■■□□□ 1.98
HR-203ENST00000517699 NESP48681 1621 aa27.35■■□□□ 1.97
HR-203ENST00000517699 LAMC3Q9Y6N6 1575 aa27.3■■□□□ 1.96
HR-203ENST00000517699 TOP2AP11388 1531 aaKnown RBP27.27■■□□□ 1.96
HR-203ENST00000517699 ERCC6Q03468 1493 aa27.19■■□□□ 1.94
HR-203ENST00000517699 DNAJC5Q9H3Z4 198 aa27.17■■□□□ 1.94
HR-203ENST00000517699 KIF21AQ7Z4S6 1674 aa27.14■■□□□ 1.94
HR-203ENST00000517699 THOC2Q8NI27 1593 aaKnown RBP27.09■■□□□ 1.93
HR-203ENST00000517699 CADPSQ9ULU8 1353 aa27.08■■□□□ 1.93
HR-203ENST00000517699 CUX2O14529 1486 aa27.06■■□□□ 1.92
HR-203ENST00000517699 PDS5BQ9NTI5 1447 aa26.99■■□□□ 1.91
HR-203ENST00000517699 CFTRP13569 1480 aa26.95■■□□□ 1.91
HR-203ENST00000517699 PRDM2Q13029 1718 aa26.93■■□□□ 1.9
HR-203ENST00000517699 CCDC88BA6NC98 1476 aa26.89■■□□□ 1.9
HR-203ENST00000517699 FANCD2Q9BXW9 1451 aa26.81■■□□□ 1.88
HR-203ENST00000517699 MRC2Q9UBG0 1479 aa26.81■■□□□ 1.88
HR-203ENST00000517699 CEP164Q9UPV0 1460 aa26.79■■□□□ 1.88
HR-203ENST00000517699 WDR62O43379 1518 aa26.79■■□□□ 1.88
HR-203ENST00000517699 URB2Q14146 1524 aaKnown RBP26.61■■□□□ 1.85
HR-203ENST00000517699 SUPT5HO00267 1087 aaKnown RBP26.41■■□□□ 1.82
HR-203ENST00000517699 TOPBP1Q92547 1522 aa26.39■■□□□ 1.82
HR-203ENST00000517699 DNMBPQ6XZF7 1577 aa26.38■■□□□ 1.81
HR-203ENST00000517699 ABCC8Q09428 1581 aa26.32■■□□□ 1.8
HR-203ENST00000517699 IFT140Q96RY7 1462 aa26.23■■□□□ 1.79
HR-203ENST00000517699 TARBP1Q13395 1621 aaKnown RBP26.21■■□□□ 1.79
HR-203ENST00000517699 CUX1P39880 1505 aa26.17■■□□□ 1.78
HR-203ENST00000517699 POLA1P09884 1462 aaPredicted RBP26.17■■□□□ 1.78
HR-203ENST00000517699 ZNF608Q9ULD9 1512 aaPredicted RBP26.16■■□□□ 1.78
HR-203ENST00000517699 EIF4G3O43432 1585 aaKnown RBP26.13■■□□□ 1.77
HR-203ENST00000517699 FGD5Q6ZNL6 1462 aa26.06■■□□□ 1.76
HR-203ENST00000517699 WDR97A6NE52 1622 aa26.03■■□□□ 1.76
HR-203ENST00000517699 RAD54L2Q9Y4B4 1467 aa26.01■■□□□ 1.75
HR-203ENST00000517699 BIVM-ERCC5R4GMW8 1640 aa25.97■■□□□ 1.75
HR-203ENST00000517699 SOGA1O94964 1423 aa25.94■■□□□ 1.74
HR-203ENST00000517699 AQRO60306 1485 aaKnown RBP eCLIP25.92■■□□□ 1.74
HR-203ENST00000517699 SYNJ1O43426 1573 aa25.92■■□□□ 1.74
HR-203ENST00000517699 TRIM41Q8WV44 630 aa25.92■■□□□ 1.74
HR-203ENST00000517699 TOP2BQ02880 1626 aa25.92■■□□□ 1.74
HR-203ENST00000517699 CHD1O14646 1710 aa25.86■■□□□ 1.73
HR-203ENST00000517699 WRNQ14191 1432 aaPredicted RBP eCLIP25.85■■□□□ 1.73
HR-203ENST00000517699 ABCA5Q8WWZ7 1642 aa25.82■■□□□ 1.72
HR-203ENST00000517699 ABCA10Q8WWZ4 1543 aa25.82■■□□□ 1.72
HR-203ENST00000517699 TDRD9Q8NDG6 1382 aaKnown RBP25.82■■□□□ 1.72
HR-203ENST00000517699 PBRM1Q86U86 1689 aa25.81■■□□□ 1.72
HR-203ENST00000517699 OSCARQ8IYS5 282 aa25.74■■□□□ 1.71
HR-203ENST00000517699 SNAPC4Q5SXM2 1469 aa25.73■■□□□ 1.71
HR-203ENST00000517699 GRIN2BQ13224 1484 aa25.72■■□□□ 1.71
HR-203ENST00000517699 GAPVD1Q14C86 1478 aa25.7■■□□□ 1.7
HR-203ENST00000517699 MAGI1Q96QZ7 1491 aaPredicted RBP25.7■■□□□ 1.7
HR-203ENST00000517699 SYNJ2O15056 1496 aa25.59■■□□□ 1.69
HR-203ENST00000517699 RIMBP3CA6NJZ7 1639 aa25.58■■□□□ 1.69
HR-203ENST00000517699 RIMBP3BA6NNM3 1639 aa25.58■■□□□ 1.69
HR-203ENST00000517699 RIMBP3Q9UFD9 1639 aa25.58■■□□□ 1.69
HR-203ENST00000517699 ADAMTS12P58397 1594 aa25.56■■□□□ 1.68
HR-203ENST00000517699 CLASP1Q7Z460 1538 aa25.56■■□□□ 1.68
HR-203ENST00000517699 ARHGEF11O15085 1522 aa25.52■■□□□ 1.68
HR-203ENST00000517699 ERICH3Q5RHP9 1530 aa25.51■■□□□ 1.67
HR-203ENST00000517699 FBLN2P98095 1184 aa25.47■■□□□ 1.67
HR-203ENST00000517699 GRIN2AQ12879 1464 aa25.42■■□□□ 1.66
HR-203ENST00000517699 CHMP7Q8WUX9 453 aaPredicted RBP25.42■■□□□ 1.66
HR-203ENST00000517699 FHAD1B1AJZ9 1412 aa25.38■■□□□ 1.65
HR-203ENST00000517699 CEP170Q5SW79 1584 aa25.36■■□□□ 1.65
HR-203ENST00000517699 NUP160Q12769 1436 aa25.34■■□□□ 1.65
HR-203ENST00000517699 ARAP1Q96P48 1450 aa25.31■■□□□ 1.64
HR-203ENST00000517699 CUL7Q14999 1698 aa25.29■■□□□ 1.64
HR-203ENST00000517699 KIF27Q86VH2 1401 aa25.29■■□□□ 1.64
HR-203ENST00000517699 SHROOM2Q13796 1616 aa25.26■■□□□ 1.63
HR-203ENST00000517699 IGF1RP08069 1367 aa25.21■■□□□ 1.63
HR-203ENST00000517699 RUSC2Q8N2Y8 1516 aa25.21■■□□□ 1.63
HR-203ENST00000517699 ERCC6L2Q5T890 1561 aa25.17■■□□□ 1.62
HR-203ENST00000517699 CYB5RLQ6IPT4 315 aa25.08■■□□□ 1.61
HR-203ENST00000517699 CARMIL1Q5VZK9 1371 aa25.04■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms