RNA–Protein interactions for RNA: ENST00000517667.5

TRAPPC9-203, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 518 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-203ENST00000517667 NISCHQ9Y2I1 1504 aa29.29■■■□□ 2.28
TRAPPC9-203ENST00000517667 ABCC9O60706 1549 aa26.72■■□□□ 1.87
TRAPPC9-203ENST00000517667 CCDC180Q9P1Z9 1646 aa26.54■■□□□ 1.84
TRAPPC9-203ENST00000517667 RB1CC1Q8TDY2 1594 aa25.39■■□□□ 1.65
TRAPPC9-203ENST00000517667 DNAJC5BQ9UF47 199 aa25.27■■□□□ 1.64
TRAPPC9-203ENST00000517667 NACADO15069 1562 aa25.13■■□□□ 1.61
TRAPPC9-203ENST00000517667 UNC13AQ9UPW8 1703 aa24.81■■□□□ 1.56
TRAPPC9-203ENST00000517667 DCAF8L2P0C7V8 631 aa24.75■■□□□ 1.55
TRAPPC9-203ENST00000517667 PABPN1Q86U42 306 aaKnown RBP eCLIP24.75■■□□□ 1.55
TRAPPC9-203ENST00000517667 MYO15BQ96JP2 1530 aa24.69■■□□□ 1.54
TRAPPC9-203ENST00000517667 BICRAQ9NZM4 1560 aa24.6■■□□□ 1.53
TRAPPC9-203ENST00000517667 SHROOM4Q9ULL8 1493 aa24.35■■□□□ 1.49
TRAPPC9-203ENST00000517667 DCAF1Q9Y4B6 1507 aa24.23■■□□□ 1.47
TRAPPC9-203ENST00000517667 ZCCHC6Q5VYS8 1495 aaKnown RBP24.21■■□□□ 1.47
TRAPPC9-203ENST00000517667 CC2D2AQ9P2K1 1620 aa24.18■■□□□ 1.46
TRAPPC9-203ENST00000517667 CECR2Q9BXF3 1484 aa24.14■■□□□ 1.46
TRAPPC9-203ENST00000517667 SCRIBQ14160 1630 aa24.06■■□□□ 1.44
TRAPPC9-203ENST00000517667 EIF4G1Q04637 1599 aaKnown RBP24.05■■□□□ 1.44
TRAPPC9-203ENST00000517667 DNAJC5Q9H3Z4 198 aa23.54■■□□□ 1.36
TRAPPC9-203ENST00000517667 CUX2O14529 1486 aa23.26■■□□□ 1.31
TRAPPC9-203ENST00000517667 NCAPD3P42695 1498 aa23.15■■□□□ 1.3
TRAPPC9-203ENST00000517667 ERCC6Q03468 1493 aa23.15■■□□□ 1.3
TRAPPC9-203ENST00000517667 ATAD2BQ9ULI0 1458 aa23.01■■□□□ 1.27
TRAPPC9-203ENST00000517667 HMGXB3Q12766 1538 aa23.01■■□□□ 1.27
TRAPPC9-203ENST00000517667 SMARCA2P51531 1590 aa23■■□□□ 1.27
TRAPPC9-203ENST00000517667 SMARCA4P51532 1647 aa22.95■■□□□ 1.26
TRAPPC9-203ENST00000517667 NESP48681 1621 aa22.84■■□□□ 1.25
TRAPPC9-203ENST00000517667 BAZ1BQ9UIG0 1483 aaKnown RBP22.8■■□□□ 1.24
TRAPPC9-203ENST00000517667 BAZ1AQ9NRL2 1556 aaPredicted RBP22.8■■□□□ 1.24
TRAPPC9-203ENST00000517667 THOC2Q8NI27 1593 aaKnown RBP22.77■■□□□ 1.24
TRAPPC9-203ENST00000517667 PEG3Q9GZU2 1588 aa22.76■■□□□ 1.23
TRAPPC9-203ENST00000517667 LAMC3Q9Y6N6 1575 aa22.74■■□□□ 1.23
TRAPPC9-203ENST00000517667 KIF21AQ7Z4S6 1674 aa22.63■■□□□ 1.21
TRAPPC9-203ENST00000517667 PDS5BQ9NTI5 1447 aa22.58■■□□□ 1.21
TRAPPC9-203ENST00000517667 MROH2BQ7Z745 1585 aa22.52■■□□□ 1.2
TRAPPC9-203ENST00000517667 CADPSQ9ULU8 1353 aa22.41■■□□□ 1.18
TRAPPC9-203ENST00000517667 MRC2Q9UBG0 1479 aa22.41■■□□□ 1.18
TRAPPC9-203ENST00000517667 WDR62O43379 1518 aa22.39■■□□□ 1.17
TRAPPC9-203ENST00000517667 TRIM41Q8WV44 630 aa22.33■■□□□ 1.17
TRAPPC9-203ENST00000517667 WIZO95785 1651 aa22.26■■□□□ 1.15
TRAPPC9-203ENST00000517667 CEP164Q9UPV0 1460 aa22.25■■□□□ 1.15
TRAPPC9-203ENST00000517667 FANCD2Q9BXW9 1451 aa22.17■■□□□ 1.14
TRAPPC9-203ENST00000517667 CFTRP13569 1480 aa22.1■■□□□ 1.13
TRAPPC9-203ENST00000517667 OSCARQ8IYS5 282 aa22.06■■□□□ 1.12
TRAPPC9-203ENST00000517667 TOP2AP11388 1531 aaKnown RBP22■■□□□ 1.11
TRAPPC9-203ENST00000517667 URB2Q14146 1524 aaKnown RBP21.99■■□□□ 1.11
TRAPPC9-203ENST00000517667 PRDM2Q13029 1718 aa21.98■■□□□ 1.11
TRAPPC9-203ENST00000517667 RSF1Q96T23 1441 aaPredicted RBP21.91■■□□□ 1.1
TRAPPC9-203ENST00000517667 RIMBP3CA6NJZ7 1639 aa21.87■■□□□ 1.09
TRAPPC9-203ENST00000517667 RIMBP3BA6NNM3 1639 aa21.87■■□□□ 1.09
TRAPPC9-203ENST00000517667 RIMBP3Q9UFD9 1639 aa21.87■■□□□ 1.09
TRAPPC9-203ENST00000517667 IFT140Q96RY7 1462 aa21.82■■□□□ 1.08
TRAPPC9-203ENST00000517667 ARHGEF11O15085 1522 aa21.75■■□□□ 1.07
TRAPPC9-203ENST00000517667 ZNF608Q9ULD9 1512 aaPredicted RBP21.75■■□□□ 1.07
TRAPPC9-203ENST00000517667 TOPBP1Q92547 1522 aa21.71■■□□□ 1.07
TRAPPC9-203ENST00000517667 EIF4G3O43432 1585 aaKnown RBP21.7■■□□□ 1.06
TRAPPC9-203ENST00000517667 ABCC8Q09428 1581 aa21.7■■□□□ 1.06
TRAPPC9-203ENST00000517667 CCDC88BA6NC98 1476 aa21.69■■□□□ 1.06
TRAPPC9-203ENST00000517667 DNMBPQ6XZF7 1577 aa21.65■■□□□ 1.06
TRAPPC9-203ENST00000517667 CHD1O14646 1710 aa21.61■■□□□ 1.05
TRAPPC9-203ENST00000517667 TARBP1Q13395 1621 aaKnown RBP21.58■■□□□ 1.04
TRAPPC9-203ENST00000517667 CYB5RLQ6IPT4 315 aa21.53■■□□□ 1.04
TRAPPC9-203ENST00000517667 AQRO60306 1485 aaKnown RBP eCLIP21.51■■□□□ 1.03
TRAPPC9-203ENST00000517667 ARAP1Q96P48 1450 aa21.49■■□□□ 1.03
TRAPPC9-203ENST00000517667 POLA1P09884 1462 aaPredicted RBP21.47■■□□□ 1.03
TRAPPC9-203ENST00000517667 WDR97A6NE52 1622 aa21.42■■□□□ 1.02
TRAPPC9-203ENST00000517667 TRHP20396 242 aaPredicted RBP21.42■■□□□ 1.02
TRAPPC9-203ENST00000517667 FBLN2P98095 1184 aa21.42■■□□□ 1.02
TRAPPC9-203ENST00000517667 RAD54L2Q9Y4B4 1467 aa21.35■■□□□ 1.01
TRAPPC9-203ENST00000517667 SOGA1O94964 1423 aa21.34■■□□□ 1.01
TRAPPC9-203ENST00000517667 CLASP1Q7Z460 1538 aa21.34■■□□□ 1.01
TRAPPC9-203ENST00000517667 SYNJ1O43426 1573 aa21.32■■□□□ 1
TRAPPC9-203ENST00000517667 SNAPC4Q5SXM2 1469 aa21.32■■□□□ 1
TRAPPC9-203ENST00000517667 TDRD9Q8NDG6 1382 aaKnown RBP21.31■■□□□ 1
TRAPPC9-203ENST00000517667 MAGI1Q96QZ7 1491 aaPredicted RBP21.29■■□□□ 1
TRAPPC9-203ENST00000517667 FGD5Q6ZNL6 1462 aa21.28■■□□□ 1
TRAPPC9-203ENST00000517667 CHMP7Q8WUX9 453 aaPredicted RBP21.23■□□□□ 0.99
TRAPPC9-203ENST00000517667 GRIN2BQ13224 1484 aa21.23■□□□□ 0.99
TRAPPC9-203ENST00000517667 SYNJ2O15056 1496 aa21.21■□□□□ 0.99
TRAPPC9-203ENST00000517667 CUX1P39880 1505 aa21.19■□□□□ 0.98
TRAPPC9-203ENST00000517667 PBRM1Q86U86 1689 aa21.18■□□□□ 0.98
TRAPPC9-203ENST00000517667 GAPVD1Q14C86 1478 aa21.11■□□□□ 0.97
TRAPPC9-203ENST00000517667 AEBP2Q6ZN18 517 aaPredicted RBP21.08■□□□□ 0.97
TRAPPC9-203ENST00000517667 ABCA5Q8WWZ7 1642 aa21.07■□□□□ 0.96
TRAPPC9-203ENST00000517667 ABCA10Q8WWZ4 1543 aa21.04■□□□□ 0.96
TRAPPC9-203ENST00000517667 GRIN2AQ12879 1464 aa20.96■□□□□ 0.95
TRAPPC9-203ENST00000517667 ADAMTS12P58397 1594 aa20.93■□□□□ 0.94
TRAPPC9-203ENST00000517667 ERCC6L2Q5T890 1561 aa20.92■□□□□ 0.94
TRAPPC9-203ENST00000517667 CEP170Q5SW79 1584 aa20.91■□□□□ 0.94
TRAPPC9-203ENST00000517667 SHROOM2Q13796 1616 aa20.89■□□□□ 0.94
TRAPPC9-203ENST00000517667 NUP160Q12769 1436 aa20.89■□□□□ 0.94
TRAPPC9-203ENST00000517667 WRNQ14191 1432 aaPredicted RBP eCLIP20.88■□□□□ 0.938e-10■■■■■ 68.9
TRAPPC9-203ENST00000517667 BIVM-ERCC5R4GMW8 1640 aa20.84■□□□□ 0.93
TRAPPC9-203ENST00000517667 FHAD1B1AJZ9 1412 aa20.82■□□□□ 0.92
TRAPPC9-203ENST00000517667 TOP2BQ02880 1626 aa20.82■□□□□ 0.92
TRAPPC9-203ENST00000517667 KIF13AQ9H1H9 1805 aa20.81■□□□□ 0.92
TRAPPC9-203ENST00000517667 ERICH3Q5RHP9 1530 aa20.8■□□□□ 0.92
TRAPPC9-203ENST00000517667 PRG4Q92954 1404 aaPredicted RBP20.7■□□□□ 0.9
TRAPPC9-203ENST00000517667 RUSC2Q8N2Y8 1516 aa20.65■□□□□ 0.9
TRAPPC9-203ENST00000517667 MAPKBP1O60336 1514 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms