RNA–Protein interactions for RNA: ENST00000517637.2

KDM2A-203, Transcript of lysine demethylase 2A, humanhuman

TSL 3

Gene KDM2A, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM2A-203ENST00000517637 NISCHQ9Y2I1 1504 aa24.71■■□□□ 1.55
KDM2A-203ENST00000517637 ABCC9O60706 1549 aa22.42■■□□□ 1.18
KDM2A-203ENST00000517637 CCDC180Q9P1Z9 1646 aa22.31■■□□□ 1.16
KDM2A-203ENST00000517637 RB1CC1Q8TDY2 1594 aa21.33■■□□□ 1.01
KDM2A-203ENST00000517637 DNAJC5BQ9UF47 199 aa21.27■■□□□ 1
KDM2A-203ENST00000517637 NACADO15069 1562 aa21.16■□□□□ 0.98
KDM2A-203ENST00000517637 MYO15BQ96JP2 1530 aa20.86■□□□□ 0.93
KDM2A-203ENST00000517637 DCAF8L2P0C7V8 631 aa20.85■□□□□ 0.93
KDM2A-203ENST00000517637 PABPN1Q86U42 306 aaKnown RBP eCLIP20.83■□□□□ 0.93
KDM2A-203ENST00000517637 UNC13AQ9UPW8 1703 aa20.78■□□□□ 0.92
KDM2A-203ENST00000517637 BICRAQ9NZM4 1560 aa20.69■□□□□ 0.9
KDM2A-203ENST00000517637 SHROOM4Q9ULL8 1493 aa20.51■□□□□ 0.87
KDM2A-203ENST00000517637 DCAF1Q9Y4B6 1507 aa20.48■□□□□ 0.87
KDM2A-203ENST00000517637 ZCCHC6Q5VYS8 1495 aaKnown RBP20.42■□□□□ 0.86
KDM2A-203ENST00000517637 CC2D2AQ9P2K1 1620 aa20.29■□□□□ 0.84
KDM2A-203ENST00000517637 CECR2Q9BXF3 1484 aa20.27■□□□□ 0.84
KDM2A-203ENST00000517637 EIF4G1Q04637 1599 aaKnown RBP20.21■□□□□ 0.83
KDM2A-203ENST00000517637 SCRIBQ14160 1630 aa20.19■□□□□ 0.82
KDM2A-203ENST00000517637 DNAJC5Q9H3Z4 198 aa19.78■□□□□ 0.76
KDM2A-203ENST00000517637 NCAPD3P42695 1498 aa19.54■□□□□ 0.72
KDM2A-203ENST00000517637 CUX2O14529 1486 aa19.54■□□□□ 0.72
KDM2A-203ENST00000517637 ERCC6Q03468 1493 aa19.41■□□□□ 0.7
KDM2A-203ENST00000517637 ATAD2BQ9ULI0 1458 aa19.4■□□□□ 0.7
KDM2A-203ENST00000517637 SMARCA2P51531 1590 aa19.36■□□□□ 0.69
KDM2A-203ENST00000517637 HMGXB3Q12766 1538 aa19.35■□□□□ 0.69
KDM2A-203ENST00000517637 SMARCA4P51532 1647 aa19.3■□□□□ 0.68
KDM2A-203ENST00000517637 BAZ1AQ9NRL2 1556 aaPredicted RBP19.2■□□□□ 0.66
KDM2A-203ENST00000517637 PEG3Q9GZU2 1588 aa19.19■□□□□ 0.66
KDM2A-203ENST00000517637 NESP48681 1621 aa19.18■□□□□ 0.66
KDM2A-203ENST00000517637 BAZ1BQ9UIG0 1483 aaKnown RBP19.18■□□□□ 0.66
KDM2A-203ENST00000517637 LAMC3Q9Y6N6 1575 aa19.12■□□□□ 0.65
KDM2A-203ENST00000517637 THOC2Q8NI27 1593 aaKnown RBP19.09■□□□□ 0.65
KDM2A-203ENST00000517637 PDS5BQ9NTI5 1447 aa19.02■□□□□ 0.64
KDM2A-203ENST00000517637 MROH2BQ7Z745 1585 aa18.99■□□□□ 0.63
KDM2A-203ENST00000517637 KIF21AQ7Z4S6 1674 aa18.95■□□□□ 0.62
KDM2A-203ENST00000517637 CADPSQ9ULU8 1353 aa18.91■□□□□ 0.62
KDM2A-203ENST00000517637 MRC2Q9UBG0 1479 aa18.84■□□□□ 0.61
KDM2A-203ENST00000517637 WDR62O43379 1518 aa18.81■□□□□ 0.6
KDM2A-203ENST00000517637 WIZO95785 1651 aa18.73■□□□□ 0.59
KDM2A-203ENST00000517637 CEP164Q9UPV0 1460 aa18.71■□□□□ 0.59
KDM2A-203ENST00000517637 TRIM41Q8WV44 630 aa18.68■□□□□ 0.58
KDM2A-203ENST00000517637 CFTRP13569 1480 aa18.65■□□□□ 0.58
KDM2A-203ENST00000517637 FANCD2Q9BXW9 1451 aa18.65■□□□□ 0.58
KDM2A-203ENST00000517637 OSCARQ8IYS5 282 aa18.59■□□□□ 0.57
KDM2A-203ENST00000517637 RSF1Q96T23 1441 aaPredicted RBP18.54■□□□□ 0.56
KDM2A-203ENST00000517637 TOP2AP11388 1531 aaKnown RBP18.53■□□□□ 0.56
KDM2A-203ENST00000517637 URB2Q14146 1524 aaKnown RBP18.5■□□□□ 0.55
KDM2A-203ENST00000517637 PRDM2Q13029 1718 aa18.41■□□□□ 0.54
KDM2A-203ENST00000517637 IFT140Q96RY7 1462 aa18.38■□□□□ 0.53
KDM2A-203ENST00000517637 RIMBP3CA6NJZ7 1639 aa18.31■□□□□ 0.52
KDM2A-203ENST00000517637 RIMBP3BA6NNM3 1639 aa18.31■□□□□ 0.52
KDM2A-203ENST00000517637 RIMBP3Q9UFD9 1639 aa18.31■□□□□ 0.52
KDM2A-203ENST00000517637 ABCC8Q09428 1581 aa18.31■□□□□ 0.52
KDM2A-203ENST00000517637 CCDC88BA6NC98 1476 aa18.31■□□□□ 0.52
KDM2A-203ENST00000517637 ZNF608Q9ULD9 1512 aaPredicted RBP18.29■□□□□ 0.52
KDM2A-203ENST00000517637 TOPBP1Q92547 1522 aa18.28■□□□□ 0.52
KDM2A-203ENST00000517637 ARHGEF11O15085 1522 aa18.24■□□□□ 0.51
KDM2A-203ENST00000517637 DNMBPQ6XZF7 1577 aa18.2■□□□□ 0.5
KDM2A-203ENST00000517637 EIF4G3O43432 1585 aaKnown RBP18.19■□□□□ 0.5
KDM2A-203ENST00000517637 TARBP1Q13395 1621 aaKnown RBP18.15■□□□□ 0.5
KDM2A-203ENST00000517637 CYB5RLQ6IPT4 315 aa18.11■□□□□ 0.49
KDM2A-203ENST00000517637 AQRO60306 1485 aaKnown RBP eCLIP18.1■□□□□ 0.492e-12■■■■■ 33.8
KDM2A-203ENST00000517637 CHD1O14646 1710 aa18.09■□□□□ 0.49
KDM2A-203ENST00000517637 POLA1P09884 1462 aaPredicted RBP18.07■□□□□ 0.48
KDM2A-203ENST00000517637 ARAP1Q96P48 1450 aa18.03■□□□□ 0.48
KDM2A-203ENST00000517637 WDR97A6NE52 1622 aa18.02■□□□□ 0.48
KDM2A-203ENST00000517637 FBLN2P98095 1184 aa18.01■□□□□ 0.47
KDM2A-203ENST00000517637 SOGA1O94964 1423 aa18■□□□□ 0.47
KDM2A-203ENST00000517637 RAD54L2Q9Y4B4 1467 aa17.97■□□□□ 0.47
KDM2A-203ENST00000517637 TRHP20396 242 aaPredicted RBP17.96■□□□□ 0.47
KDM2A-203ENST00000517637 TDRD9Q8NDG6 1382 aaKnown RBP17.95■□□□□ 0.46
KDM2A-203ENST00000517637 MAGI1Q96QZ7 1491 aaPredicted RBP17.93■□□□□ 0.46
KDM2A-203ENST00000517637 CLASP1Q7Z460 1538 aa17.93■□□□□ 0.46
KDM2A-203ENST00000517637 SNAPC4Q5SXM2 1469 aa17.92■□□□□ 0.46
KDM2A-203ENST00000517637 FGD5Q6ZNL6 1462 aa17.91■□□□□ 0.46
KDM2A-203ENST00000517637 CHMP7Q8WUX9 453 aaPredicted RBP17.9■□□□□ 0.46
KDM2A-203ENST00000517637 SYNJ1O43426 1573 aa17.9■□□□□ 0.46
KDM2A-203ENST00000517637 GRIN2BQ13224 1484 aa17.88■□□□□ 0.45
KDM2A-203ENST00000517637 SYNJ2O15056 1496 aa17.86■□□□□ 0.45
KDM2A-203ENST00000517637 CUX1P39880 1505 aa17.86■□□□□ 0.45
KDM2A-203ENST00000517637 GAPVD1Q14C86 1478 aa17.78■□□□□ 0.44
KDM2A-203ENST00000517637 PBRM1Q86U86 1689 aa17.74■□□□□ 0.43
KDM2A-203ENST00000517637 ABCA10Q8WWZ4 1543 aa17.74■□□□□ 0.43
KDM2A-203ENST00000517637 ABCA5Q8WWZ7 1642 aa17.72■□□□□ 0.43
KDM2A-203ENST00000517637 GRIN2AQ12879 1464 aa17.64■□□□□ 0.41
KDM2A-203ENST00000517637 AEBP2Q6ZN18 517 aaPredicted RBP17.64■□□□□ 0.41
KDM2A-203ENST00000517637 WRNQ14191 1432 aaPredicted RBP eCLIP17.63■□□□□ 0.41
KDM2A-203ENST00000517637 NUP160Q12769 1436 aa17.62■□□□□ 0.41
KDM2A-203ENST00000517637 ADAMTS12P58397 1594 aa17.57■□□□□ 0.4
KDM2A-203ENST00000517637 CEP170Q5SW79 1584 aa17.57■□□□□ 0.4
KDM2A-203ENST00000517637 FHAD1B1AJZ9 1412 aa17.56■□□□□ 0.4
KDM2A-203ENST00000517637 SHROOM2Q13796 1616 aa17.56■□□□□ 0.4
KDM2A-203ENST00000517637 ERCC6L2Q5T890 1561 aa17.56■□□□□ 0.4
KDM2A-203ENST00000517637 BIVM-ERCC5R4GMW8 1640 aa17.54■□□□□ 0.4
KDM2A-203ENST00000517637 TOP2BQ02880 1626 aa17.54■□□□□ 0.4
KDM2A-203ENST00000517637 ERICH3Q5RHP9 1530 aa17.52■□□□□ 0.4
KDM2A-203ENST00000517637 SUPT5HO00267 1087 aaKnown RBP17.44■□□□□ 0.38
KDM2A-203ENST00000517637 JPH4Q96JJ6 628 aa17.43■□□□□ 0.38
KDM2A-203ENST00000517637 PRG4Q92954 1404 aaPredicted RBP17.42■□□□□ 0.38
KDM2A-203ENST00000517637 KIF13AQ9H1H9 1805 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 170.4 ms