RNA–Protein interactions for RNA: ENST00000517558.1

TNFRSF10C-203, Transcript of TNF receptor superfamily member 10c, humanhuman

TSL 2

Gene TNFRSF10C, Length 894 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF10C-203ENST00000517558 NISCHQ9Y2I1 1504 aa36.7■■■■□ 3.47
TNFRSF10C-203ENST00000517558 ABCC9O60706 1549 aa32.95■■■□□ 2.87
TNFRSF10C-203ENST00000517558 CCDC180Q9P1Z9 1646 aa32.94■■■□□ 2.86
TNFRSF10C-203ENST00000517558 RB1CC1Q8TDY2 1594 aa31.34■■■□□ 2.61
TNFRSF10C-203ENST00000517558 NACADO15069 1562 aa31.14■■■□□ 2.58
TNFRSF10C-203ENST00000517558 DNAJC5BQ9UF47 199 aa31.05■■■□□ 2.56
TNFRSF10C-203ENST00000517558 DCAF8L2P0C7V8 631 aa30.83■■■□□ 2.53
TNFRSF10C-203ENST00000517558 MYO15BQ96JP2 1530 aa30.76■■■□□ 2.51
TNFRSF10C-203ENST00000517558 UNC13AQ9UPW8 1703 aa30.71■■■□□ 2.51
TNFRSF10C-203ENST00000517558 PABPN1Q86U42 306 aaKnown RBP eCLIP30.66■■■□□ 2.5
TNFRSF10C-203ENST00000517558 BICRAQ9NZM4 1560 aa30.54■■■□□ 2.48
TNFRSF10C-203ENST00000517558 ZCCHC6Q5VYS8 1495 aaKnown RBP30.43■■■□□ 2.46
TNFRSF10C-203ENST00000517558 DCAF1Q9Y4B6 1507 aa30.35■■■□□ 2.45
TNFRSF10C-203ENST00000517558 SHROOM4Q9ULL8 1493 aa30.05■■■□□ 2.4
TNFRSF10C-203ENST00000517558 SCRIBQ14160 1630 aa29.96■■■□□ 2.39
TNFRSF10C-203ENST00000517558 CC2D2AQ9P2K1 1620 aa29.79■■■□□ 2.36
TNFRSF10C-203ENST00000517558 EIF4G1Q04637 1599 aaKnown RBP29.73■■■□□ 2.35
TNFRSF10C-203ENST00000517558 CECR2Q9BXF3 1484 aa29.68■■■□□ 2.34
TNFRSF10C-203ENST00000517558 NCAPD3P42695 1498 aa28.79■■■□□ 2.2
TNFRSF10C-203ENST00000517558 ATAD2BQ9ULI0 1458 aa28.69■■■□□ 2.18
TNFRSF10C-203ENST00000517558 SMARCA4P51532 1647 aa28.63■■■□□ 2.17
TNFRSF10C-203ENST00000517558 SMARCA2P51531 1590 aa28.55■■■□□ 2.16
TNFRSF10C-203ENST00000517558 HMGXB3Q12766 1538 aa28.55■■■□□ 2.16
TNFRSF10C-203ENST00000517558 DNAJC5Q9H3Z4 198 aa28.48■■■□□ 2.15
TNFRSF10C-203ENST00000517558 BAZ1AQ9NRL2 1556 aaPredicted RBP28.45■■■□□ 2.15
TNFRSF10C-203ENST00000517558 CUX2O14529 1486 aa28.42■■■□□ 2.14
TNFRSF10C-203ENST00000517558 PEG3Q9GZU2 1588 aa28.41■■■□□ 2.14
TNFRSF10C-203ENST00000517558 ERCC6Q03468 1493 aa28.37■■■□□ 2.13
TNFRSF10C-203ENST00000517558 BAZ1BQ9UIG0 1483 aaKnown RBP28.34■■■□□ 2.13
TNFRSF10C-203ENST00000517558 NESP48681 1621 aa28.33■■■□□ 2.13
TNFRSF10C-203ENST00000517558 MROH2BQ7Z745 1585 aa28.29■■■□□ 2.12
TNFRSF10C-203ENST00000517558 LAMC3Q9Y6N6 1575 aa28.11■■■□□ 2.09
TNFRSF10C-203ENST00000517558 THOC2Q8NI27 1593 aaKnown RBP28.07■■■□□ 2.08
TNFRSF10C-203ENST00000517558 KIF21AQ7Z4S6 1674 aa27.95■■■□□ 2.07
TNFRSF10C-203ENST00000517558 WIZO95785 1651 aa27.93■■■□□ 2.06
TNFRSF10C-203ENST00000517558 PDS5BQ9NTI5 1447 aa27.91■■■□□ 2.06
TNFRSF10C-203ENST00000517558 CADPSQ9ULU8 1353 aa27.88■■■□□ 2.05
TNFRSF10C-203ENST00000517558 MRC2Q9UBG0 1479 aa27.7■■■□□ 2.02
TNFRSF10C-203ENST00000517558 RSF1Q96T23 1441 aaPredicted RBP27.69■■■□□ 2.02
TNFRSF10C-203ENST00000517558 WDR62O43379 1518 aa27.67■■■□□ 2.02
TNFRSF10C-203ENST00000517558 CFTRP13569 1480 aa27.58■■■□□ 2.01
TNFRSF10C-203ENST00000517558 TOP2AP11388 1531 aaKnown RBP27.57■■■□□ 2
TNFRSF10C-203ENST00000517558 CEP164Q9UPV0 1460 aa27.55■■■□□ 2
TNFRSF10C-203ENST00000517558 FANCD2Q9BXW9 1451 aa27.54■■■□□ 2
TNFRSF10C-203ENST00000517558 URB2Q14146 1524 aaKnown RBP27.36■■□□□ 1.97
TNFRSF10C-203ENST00000517558 CCDC88BA6NC98 1476 aa27.27■■□□□ 1.96
TNFRSF10C-203ENST00000517558 PRDM2Q13029 1718 aa27.27■■□□□ 1.96
TNFRSF10C-203ENST00000517558 TRIM41Q8WV44 630 aa27.1■■□□□ 1.93
TNFRSF10C-203ENST00000517558 OSCARQ8IYS5 282 aa27.08■■□□□ 1.93
TNFRSF10C-203ENST00000517558 TOPBP1Q92547 1522 aa27.04■■□□□ 1.92
TNFRSF10C-203ENST00000517558 ZNF608Q9ULD9 1512 aaPredicted RBP27.03■■□□□ 1.92
TNFRSF10C-203ENST00000517558 IFT140Q96RY7 1462 aa27.02■■□□□ 1.92
TNFRSF10C-203ENST00000517558 ABCC8Q09428 1581 aa26.93■■□□□ 1.9
TNFRSF10C-203ENST00000517558 DNMBPQ6XZF7 1577 aa26.92■■□□□ 1.9
TNFRSF10C-203ENST00000517558 EIF4G3O43432 1585 aaKnown RBP26.84■■□□□ 1.89
TNFRSF10C-203ENST00000517558 TARBP1Q13395 1621 aaKnown RBP26.84■■□□□ 1.89
TNFRSF10C-203ENST00000517558 RIMBP3CA6NJZ7 1639 aa26.78■■□□□ 1.88
TNFRSF10C-203ENST00000517558 RIMBP3BA6NNM3 1639 aa26.78■■□□□ 1.88
TNFRSF10C-203ENST00000517558 RIMBP3Q9UFD9 1639 aa26.78■■□□□ 1.88
TNFRSF10C-203ENST00000517558 POLA1P09884 1462 aaPredicted RBP26.77■■□□□ 1.88
TNFRSF10C-203ENST00000517558 AQRO60306 1485 aaKnown RBP eCLIP26.75■■□□□ 1.87
TNFRSF10C-203ENST00000517558 ARHGEF11O15085 1522 aa26.7■■□□□ 1.86
TNFRSF10C-203ENST00000517558 RAD54L2Q9Y4B4 1467 aa26.67■■□□□ 1.86
TNFRSF10C-203ENST00000517558 CHD1O14646 1710 aa26.65■■□□□ 1.86
TNFRSF10C-203ENST00000517558 SOGA1O94964 1423 aa26.6■■□□□ 1.85
TNFRSF10C-203ENST00000517558 CUX1P39880 1505 aa26.58■■□□□ 1.85
TNFRSF10C-203ENST00000517558 FGD5Q6ZNL6 1462 aa26.57■■□□□ 1.84
TNFRSF10C-203ENST00000517558 TDRD9Q8NDG6 1382 aaKnown RBP26.57■■□□□ 1.84
TNFRSF10C-203ENST00000517558 WDR97A6NE52 1622 aa26.52■■□□□ 1.84
TNFRSF10C-203ENST00000517558 FBLN2P98095 1184 aa26.46■■□□□ 1.83
TNFRSF10C-203ENST00000517558 SNAPC4Q5SXM2 1469 aa26.46■■□□□ 1.83
TNFRSF10C-203ENST00000517558 ARAP1Q96P48 1450 aa26.45■■□□□ 1.82
TNFRSF10C-203ENST00000517558 CYB5RLQ6IPT4 315 aa26.44■■□□□ 1.82
TNFRSF10C-203ENST00000517558 CLASP1Q7Z460 1538 aa26.39■■□□□ 1.82
TNFRSF10C-203ENST00000517558 MAGI1Q96QZ7 1491 aaPredicted RBP26.39■■□□□ 1.82
TNFRSF10C-203ENST00000517558 GRIN2BQ13224 1484 aa26.38■■□□□ 1.81
TNFRSF10C-203ENST00000517558 SYNJ2O15056 1496 aa26.3■■□□□ 1.8
TNFRSF10C-203ENST00000517558 CHMP7Q8WUX9 453 aaPredicted RBP26.3■■□□□ 1.8
TNFRSF10C-203ENST00000517558 ABCA10Q8WWZ4 1543 aa26.29■■□□□ 1.8
TNFRSF10C-203ENST00000517558 SUPT5HO00267 1087 aaKnown RBP26.29■■□□□ 1.8
TNFRSF10C-203ENST00000517558 GAPVD1Q14C86 1478 aa26.29■■□□□ 1.8
TNFRSF10C-203ENST00000517558 SYNJ1O43426 1573 aa26.29■■□□□ 1.8
TNFRSF10C-203ENST00000517558 PBRM1Q86U86 1689 aa26.28■■□□□ 1.8
TNFRSF10C-203ENST00000517558 ABCA5Q8WWZ7 1642 aa26.27■■□□□ 1.8
TNFRSF10C-203ENST00000517558 BIVM-ERCC5R4GMW8 1640 aa26.14■■□□□ 1.77
TNFRSF10C-203ENST00000517558 TOP2BQ02880 1626 aa26.12■■□□□ 1.77
TNFRSF10C-203ENST00000517558 WRNQ14191 1432 aaPredicted RBP eCLIP26.12■■□□□ 1.77
TNFRSF10C-203ENST00000517558 TRHP20396 242 aaPredicted RBP26.08■■□□□ 1.77
TNFRSF10C-203ENST00000517558 GRIN2AQ12879 1464 aa26.06■■□□□ 1.76
TNFRSF10C-203ENST00000517558 ADAMTS12P58397 1594 aa26.05■■□□□ 1.76
TNFRSF10C-203ENST00000517558 NUP160Q12769 1436 aa26.02■■□□□ 1.76
TNFRSF10C-203ENST00000517558 CEP170Q5SW79 1584 aa25.99■■□□□ 1.75
TNFRSF10C-203ENST00000517558 ERCC6L2Q5T890 1561 aa25.99■■□□□ 1.75
TNFRSF10C-203ENST00000517558 FHAD1B1AJZ9 1412 aa25.96■■□□□ 1.75
TNFRSF10C-203ENST00000517558 ERICH3Q5RHP9 1530 aa25.94■■□□□ 1.74
TNFRSF10C-203ENST00000517558 SHROOM2Q13796 1616 aa25.91■■□□□ 1.74
TNFRSF10C-203ENST00000517558 PRG4Q92954 1404 aaPredicted RBP25.71■■□□□ 1.71
TNFRSF10C-203ENST00000517558 JPH4Q96JJ6 628 aa25.69■■□□□ 1.7
TNFRSF10C-203ENST00000517558 RUSC2Q8N2Y8 1516 aa25.68■■□□□ 1.7
TNFRSF10C-203ENST00000517558 IGF1RP08069 1367 aa25.63■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms