RNA–Protein interactions for RNA: ENST00000517544.1

TMPRSS4-203, Transcript of transmembrane serine protease 4, humanhuman

TSL 3

Gene TMPRSS4, Length 789 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMPRSS4-203ENST00000517544 NISCHQ9Y2I1 1504 aa36.54■■■■□ 3.44
TMPRSS4-203ENST00000517544 CCDC180Q9P1Z9 1646 aa32.45■■■□□ 2.79
TMPRSS4-203ENST00000517544 ABCC9O60706 1549 aa31.82■■■□□ 2.68
TMPRSS4-203ENST00000517544 DCAF8L2P0C7V8 631 aa30.62■■■□□ 2.49
TMPRSS4-203ENST00000517544 RB1CC1Q8TDY2 1594 aa30.54■■■□□ 2.48
TMPRSS4-203ENST00000517544 NACADO15069 1562 aa30.49■■■□□ 2.47
TMPRSS4-203ENST00000517544 ZCCHC6Q5VYS8 1495 aaKnown RBP30.44■■■□□ 2.46
TMPRSS4-203ENST00000517544 MYO15BQ96JP2 1530 aa30.26■■■□□ 2.43
TMPRSS4-203ENST00000517544 DCAF1Q9Y4B6 1507 aa30.17■■■□□ 2.42
TMPRSS4-203ENST00000517544 UNC13AQ9UPW8 1703 aa29.97■■■□□ 2.39
TMPRSS4-203ENST00000517544 PABPN1Q86U42 306 aaKnown RBP eCLIP29.77■■■□□ 2.36
TMPRSS4-203ENST00000517544 SCRIBQ14160 1630 aa29.71■■■□□ 2.35
TMPRSS4-203ENST00000517544 BICRAQ9NZM4 1560 aa29.67■■■□□ 2.34
TMPRSS4-203ENST00000517544 DNAJC5BQ9UF47 199 aa29.22■■■□□ 2.27
TMPRSS4-203ENST00000517544 SHROOM4Q9ULL8 1493 aa29.2■■■□□ 2.26
TMPRSS4-203ENST00000517544 EIF4G1Q04637 1599 aaKnown RBP28.86■■■□□ 2.21
TMPRSS4-203ENST00000517544 CC2D2AQ9P2K1 1620 aa28.76■■■□□ 2.2
TMPRSS4-203ENST00000517544 CECR2Q9BXF3 1484 aa28.54■■■□□ 2.16
TMPRSS4-203ENST00000517544 SMARCA4P51532 1647 aa28.37■■■□□ 2.13
TMPRSS4-203ENST00000517544 BAZ1AQ9NRL2 1556 aaPredicted RBP28.3■■■□□ 2.12
TMPRSS4-203ENST00000517544 MROH2BQ7Z745 1585 aa28.21■■■□□ 2.11
TMPRSS4-203ENST00000517544 ATAD2BQ9ULI0 1458 aa28.2■■■□□ 2.1
TMPRSS4-203ENST00000517544 NCAPD3P42695 1498 aa28.14■■■□□ 2.09
TMPRSS4-203ENST00000517544 SMARCA2P51531 1590 aa28.12■■■□□ 2.09
TMPRSS4-203ENST00000517544 PEG3Q9GZU2 1588 aa28.03■■■□□ 2.08
TMPRSS4-203ENST00000517544 HMGXB3Q12766 1538 aa28■■■□□ 2.07
TMPRSS4-203ENST00000517544 BAZ1BQ9UIG0 1483 aaKnown RBP27.96■■■□□ 2.07
TMPRSS4-203ENST00000517544 WIZO95785 1651 aa27.94■■■□□ 2.06
TMPRSS4-203ENST00000517544 RSF1Q96T23 1441 aaPredicted RBP27.87■■■□□ 2.05
TMPRSS4-203ENST00000517544 TOP2AP11388 1531 aaKnown RBP27.57■■■□□ 2
TMPRSS4-203ENST00000517544 NESP48681 1621 aa27.56■■■□□ 2
TMPRSS4-203ENST00000517544 LAMC3Q9Y6N6 1575 aa27.4■■□□□ 1.98
TMPRSS4-203ENST00000517544 ERCC6Q03468 1493 aa27.38■■□□□ 1.97
TMPRSS4-203ENST00000517544 CADPSQ9ULU8 1353 aa27.34■■□□□ 1.97
TMPRSS4-203ENST00000517544 CCDC88BA6NC98 1476 aa27.28■■□□□ 1.96
TMPRSS4-203ENST00000517544 SUPT5HO00267 1087 aaKnown RBP27.27■■□□□ 1.96
TMPRSS4-203ENST00000517544 KIF21AQ7Z4S6 1674 aa27.24■■□□□ 1.95
TMPRSS4-203ENST00000517544 PDS5BQ9NTI5 1447 aa27.2■■□□□ 1.94
TMPRSS4-203ENST00000517544 CFTRP13569 1480 aa27.17■■□□□ 1.94
TMPRSS4-203ENST00000517544 THOC2Q8NI27 1593 aaKnown RBP27.09■■□□□ 1.93
TMPRSS4-203ENST00000517544 FANCD2Q9BXW9 1451 aa27.05■■□□□ 1.92
TMPRSS4-203ENST00000517544 PRDM2Q13029 1718 aa27.04■■□□□ 1.92
TMPRSS4-203ENST00000517544 CUX2O14529 1486 aa27.03■■□□□ 1.92
TMPRSS4-203ENST00000517544 CEP164Q9UPV0 1460 aa27■■□□□ 1.91
TMPRSS4-203ENST00000517544 MRC2Q9UBG0 1479 aa26.95■■□□□ 1.91
TMPRSS4-203ENST00000517544 WDR62O43379 1518 aa26.85■■□□□ 1.89
TMPRSS4-203ENST00000517544 URB2Q14146 1524 aaKnown RBP26.8■■□□□ 1.88
TMPRSS4-203ENST00000517544 TOPBP1Q92547 1522 aa26.63■■□□□ 1.85
TMPRSS4-203ENST00000517544 DNMBPQ6XZF7 1577 aa26.58■■□□□ 1.85
TMPRSS4-203ENST00000517544 ABCC8Q09428 1581 aa26.54■■□□□ 1.84
TMPRSS4-203ENST00000517544 CUX1P39880 1505 aa26.46■■□□□ 1.83
TMPRSS4-203ENST00000517544 IFT140Q96RY7 1462 aa26.41■■□□□ 1.82
TMPRSS4-203ENST00000517544 POLA1P09884 1462 aaPredicted RBP26.4■■□□□ 1.82
TMPRSS4-203ENST00000517544 ZNF608Q9ULD9 1512 aaPredicted RBP26.36■■□□□ 1.81
TMPRSS4-203ENST00000517544 FGD5Q6ZNL6 1462 aa26.36■■□□□ 1.81
TMPRSS4-203ENST00000517544 TARBP1Q13395 1621 aaKnown RBP26.34■■□□□ 1.81
TMPRSS4-203ENST00000517544 RAD54L2Q9Y4B4 1467 aa26.34■■□□□ 1.81
TMPRSS4-203ENST00000517544 SOGA1O94964 1423 aa26.3■■□□□ 1.8
TMPRSS4-203ENST00000517544 WRNQ14191 1432 aaPredicted RBP eCLIP26.27■■□□□ 1.8
TMPRSS4-203ENST00000517544 SYNJ1O43426 1573 aa26.24■■□□□ 1.79
TMPRSS4-203ENST00000517544 EIF4G3O43432 1585 aaKnown RBP26.24■■□□□ 1.79
TMPRSS4-203ENST00000517544 AQRO60306 1485 aaKnown RBP eCLIP26.22■■□□□ 1.79
TMPRSS4-203ENST00000517544 BIVM-ERCC5R4GMW8 1640 aa26.21■■□□□ 1.79
TMPRSS4-203ENST00000517544 DNAJC5Q9H3Z4 198 aa26.21■■□□□ 1.79
TMPRSS4-203ENST00000517544 TOP2BQ02880 1626 aa26.21■■□□□ 1.79
TMPRSS4-203ENST00000517544 TDRD9Q8NDG6 1382 aaKnown RBP26.17■■□□□ 1.78
TMPRSS4-203ENST00000517544 WDR97A6NE52 1622 aa26.14■■□□□ 1.78
TMPRSS4-203ENST00000517544 ABCA10Q8WWZ4 1543 aa26.07■■□□□ 1.76
TMPRSS4-203ENST00000517544 GAPVD1Q14C86 1478 aa25.98■■□□□ 1.75
TMPRSS4-203ENST00000517544 PBRM1Q86U86 1689 aa25.98■■□□□ 1.75
TMPRSS4-203ENST00000517544 ABCA5Q8WWZ7 1642 aa25.98■■□□□ 1.75
TMPRSS4-203ENST00000517544 CHD1O14646 1710 aa25.96■■□□□ 1.75
TMPRSS4-203ENST00000517544 GRIN2BQ13224 1484 aa25.96■■□□□ 1.75
TMPRSS4-203ENST00000517544 SNAPC4Q5SXM2 1469 aa25.96■■□□□ 1.75
TMPRSS4-203ENST00000517544 OSCARQ8IYS5 282 aa25.94■■□□□ 1.74
TMPRSS4-203ENST00000517544 FBLN2P98095 1184 aa25.91■■□□□ 1.74
TMPRSS4-203ENST00000517544 MAGI1Q96QZ7 1491 aaPredicted RBP25.86■■□□□ 1.73
TMPRSS4-203ENST00000517544 CHMP7Q8WUX9 453 aaPredicted RBP25.79■■□□□ 1.72
TMPRSS4-203ENST00000517544 SYNJ2O15056 1496 aa25.78■■□□□ 1.72
TMPRSS4-203ENST00000517544 ERICH3Q5RHP9 1530 aa25.74■■□□□ 1.71
TMPRSS4-203ENST00000517544 ADAMTS12P58397 1594 aa25.73■■□□□ 1.71
TMPRSS4-203ENST00000517544 KIF27Q86VH2 1401 aa25.69■■□□□ 1.7
TMPRSS4-203ENST00000517544 TRIM41Q8WV44 630 aa25.68■■□□□ 1.7
TMPRSS4-203ENST00000517544 FHAD1B1AJZ9 1412 aa25.66■■□□□ 1.7
TMPRSS4-203ENST00000517544 GRIN2AQ12879 1464 aa25.64■■□□□ 1.69
TMPRSS4-203ENST00000517544 IGF1RP08069 1367 aa25.62■■□□□ 1.69
TMPRSS4-203ENST00000517544 CLASP1Q7Z460 1538 aa25.61■■□□□ 1.69
TMPRSS4-203ENST00000517544 RIMBP3CA6NJZ7 1639 aa25.59■■□□□ 1.69
TMPRSS4-203ENST00000517544 RIMBP3BA6NNM3 1639 aa25.59■■□□□ 1.69
TMPRSS4-203ENST00000517544 RIMBP3Q9UFD9 1639 aa25.59■■□□□ 1.69
TMPRSS4-203ENST00000517544 RUSC2Q8N2Y8 1516 aa25.58■■□□□ 1.69
TMPRSS4-203ENST00000517544 ARHGEF11O15085 1522 aa25.55■■□□□ 1.68
TMPRSS4-203ENST00000517544 CEP170Q5SW79 1584 aa25.55■■□□□ 1.68
TMPRSS4-203ENST00000517544 CUL7Q14999 1698 aa25.53■■□□□ 1.68
TMPRSS4-203ENST00000517544 NUP160Q12769 1436 aa25.51■■□□□ 1.67
TMPRSS4-203ENST00000517544 CARMIL1Q5VZK9 1371 aa25.47■■□□□ 1.67
TMPRSS4-203ENST00000517544 CHIC1Q5VXU3 224 aa25.44■■□□□ 1.66
TMPRSS4-203ENST00000517544 ARAP1Q96P48 1450 aa25.36■■□□□ 1.65
TMPRSS4-203ENST00000517544 CYB5RLQ6IPT4 315 aa25.34■■□□□ 1.65
TMPRSS4-203ENST00000517544 ERCC6L2Q5T890 1561 aa25.34■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms