RNA–Protein interactions for RNA: ENST00000517493.5

RUNX1T1-206, Transcript of RUNX1 translocation partner 1, humanhuman

TSL 3

Gene RUNX1T1, Length 708 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1T1-206ENST00000517493 NISCHQ9Y2I1 1504 aa38.77■■■■□ 3.8
RUNX1T1-206ENST00000517493 CCDC180Q9P1Z9 1646 aa34.55■■■■□ 3.12
RUNX1T1-206ENST00000517493 ABCC9O60706 1549 aa34.43■■■■□ 3.1
RUNX1T1-206ENST00000517493 RB1CC1Q8TDY2 1594 aa32.85■■■□□ 2.85
RUNX1T1-206ENST00000517493 NACADO15069 1562 aa32.73■■■□□ 2.83
RUNX1T1-206ENST00000517493 DCAF8L2P0C7V8 631 aa32.7■■■□□ 2.83
RUNX1T1-206ENST00000517493 MYO15BQ96JP2 1530 aa32.42■■■□□ 2.78
RUNX1T1-206ENST00000517493 DNAJC5BQ9UF47 199 aa32.28■■■□□ 2.76
RUNX1T1-206ENST00000517493 PABPN1Q86U42 306 aaKnown RBP eCLIP32.2■■■□□ 2.75
RUNX1T1-206ENST00000517493 ZCCHC6Q5VYS8 1495 aaKnown RBP32.14■■■□□ 2.74
RUNX1T1-206ENST00000517493 DCAF1Q9Y4B6 1507 aa32.06■■■□□ 2.72
RUNX1T1-206ENST00000517493 UNC13AQ9UPW8 1703 aa31.96■■■□□ 2.71
RUNX1T1-206ENST00000517493 BICRAQ9NZM4 1560 aa31.9■■■□□ 2.7
RUNX1T1-206ENST00000517493 SHROOM4Q9ULL8 1493 aa31.53■■■□□ 2.64
RUNX1T1-206ENST00000517493 SCRIBQ14160 1630 aa31.48■■■□□ 2.63
RUNX1T1-206ENST00000517493 EIF4G1Q04637 1599 aaKnown RBP31.09■■■□□ 2.57
RUNX1T1-206ENST00000517493 CC2D2AQ9P2K1 1620 aa31.08■■■□□ 2.57
RUNX1T1-206ENST00000517493 CECR2Q9BXF3 1484 aa31.02■■■□□ 2.56
RUNX1T1-206ENST00000517493 NCAPD3P42695 1498 aa30.31■■■□□ 2.44
RUNX1T1-206ENST00000517493 ATAD2BQ9ULI0 1458 aa30.19■■■□□ 2.42
RUNX1T1-206ENST00000517493 SMARCA4P51532 1647 aa30.11■■■□□ 2.41
RUNX1T1-206ENST00000517493 SMARCA2P51531 1590 aa30.06■■■□□ 2.4
RUNX1T1-206ENST00000517493 BAZ1AQ9NRL2 1556 aaPredicted RBP30.04■■■□□ 2.4
RUNX1T1-206ENST00000517493 HMGXB3Q12766 1538 aa29.97■■■□□ 2.39
RUNX1T1-206ENST00000517493 PEG3Q9GZU2 1588 aa29.89■■■□□ 2.38
RUNX1T1-206ENST00000517493 MROH2BQ7Z745 1585 aa29.86■■■□□ 2.37
RUNX1T1-206ENST00000517493 BAZ1BQ9UIG0 1483 aaKnown RBP29.85■■■□□ 2.37
RUNX1T1-206ENST00000517493 ERCC6Q03468 1493 aa29.7■■■□□ 2.35
RUNX1T1-206ENST00000517493 NESP48681 1621 aa29.65■■■□□ 2.34
RUNX1T1-206ENST00000517493 CUX2O14529 1486 aa29.61■■■□□ 2.33
RUNX1T1-206ENST00000517493 DNAJC5Q9H3Z4 198 aa29.5■■■□□ 2.31
RUNX1T1-206ENST00000517493 LAMC3Q9Y6N6 1575 aa29.46■■■□□ 2.31
RUNX1T1-206ENST00000517493 WIZO95785 1651 aa29.43■■■□□ 2.3
RUNX1T1-206ENST00000517493 CADPSQ9ULU8 1353 aa29.39■■■□□ 2.3
RUNX1T1-206ENST00000517493 RSF1Q96T23 1441 aaPredicted RBP29.39■■■□□ 2.3
RUNX1T1-206ENST00000517493 PDS5BQ9NTI5 1447 aa29.37■■■□□ 2.29
RUNX1T1-206ENST00000517493 THOC2Q8NI27 1593 aaKnown RBP29.21■■■□□ 2.27
RUNX1T1-206ENST00000517493 KIF21AQ7Z4S6 1674 aa29.13■■■□□ 2.25
RUNX1T1-206ENST00000517493 TOP2AP11388 1531 aaKnown RBP29.1■■■□□ 2.25
RUNX1T1-206ENST00000517493 CFTRP13569 1480 aa29.08■■■□□ 2.25
RUNX1T1-206ENST00000517493 MRC2Q9UBG0 1479 aa29.04■■■□□ 2.24
RUNX1T1-206ENST00000517493 FANCD2Q9BXW9 1451 aa28.97■■■□□ 2.23
RUNX1T1-206ENST00000517493 CEP164Q9UPV0 1460 aa28.95■■■□□ 2.22
RUNX1T1-206ENST00000517493 WDR62O43379 1518 aa28.94■■■□□ 2.22
RUNX1T1-206ENST00000517493 CCDC88BA6NC98 1476 aa28.86■■■□□ 2.21
RUNX1T1-206ENST00000517493 URB2Q14146 1524 aaKnown RBP28.71■■■□□ 2.19
RUNX1T1-206ENST00000517493 PRDM2Q13029 1718 aa28.52■■■□□ 2.16
RUNX1T1-206ENST00000517493 ABCC8Q09428 1581 aa28.45■■■□□ 2.15
RUNX1T1-206ENST00000517493 OSCARQ8IYS5 282 aa28.44■■■□□ 2.14
RUNX1T1-206ENST00000517493 TOPBP1Q92547 1522 aa28.43■■■□□ 2.14
RUNX1T1-206ENST00000517493 IFT140Q96RY7 1462 aa28.41■■■□□ 2.14
RUNX1T1-206ENST00000517493 ZNF608Q9ULD9 1512 aaPredicted RBP28.33■■■□□ 2.13
RUNX1T1-206ENST00000517493 DNMBPQ6XZF7 1577 aa28.31■■■□□ 2.12
RUNX1T1-206ENST00000517493 SUPT5HO00267 1087 aaKnown RBP28.25■■■□□ 2.11
RUNX1T1-206ENST00000517493 POLA1P09884 1462 aaPredicted RBP28.17■■■□□ 2.1
RUNX1T1-206ENST00000517493 TRIM41Q8WV44 630 aa28.17■■■□□ 2.1
RUNX1T1-206ENST00000517493 AQRO60306 1485 aaKnown RBP eCLIP28.14■■■□□ 2.09
RUNX1T1-206ENST00000517493 TARBP1Q13395 1621 aaKnown RBP28.14■■■□□ 2.09
RUNX1T1-206ENST00000517493 SOGA1O94964 1423 aa28.11■■■□□ 2.09
RUNX1T1-206ENST00000517493 RAD54L2Q9Y4B4 1467 aa28.08■■■□□ 2.09
RUNX1T1-206ENST00000517493 EIF4G3O43432 1585 aaKnown RBP28.07■■■□□ 2.08
RUNX1T1-206ENST00000517493 TDRD9Q8NDG6 1382 aaKnown RBP28.03■■■□□ 2.08
RUNX1T1-206ENST00000517493 CUX1P39880 1505 aa28.01■■■□□ 2.07
RUNX1T1-206ENST00000517493 FGD5Q6ZNL6 1462 aa28.01■■■□□ 2.07
RUNX1T1-206ENST00000517493 FBLN2P98095 1184 aa27.92■■■□□ 2.06
RUNX1T1-206ENST00000517493 WDR97A6NE52 1622 aa27.86■■■□□ 2.05
RUNX1T1-206ENST00000517493 RIMBP3CA6NJZ7 1639 aa27.81■■■□□ 2.04
RUNX1T1-206ENST00000517493 RIMBP3BA6NNM3 1639 aa27.81■■■□□ 2.04
RUNX1T1-206ENST00000517493 RIMBP3Q9UFD9 1639 aa27.81■■■□□ 2.04
RUNX1T1-206ENST00000517493 ARHGEF11O15085 1522 aa27.81■■■□□ 2.04
RUNX1T1-206ENST00000517493 CHMP7Q8WUX9 453 aaPredicted RBP27.8■■■□□ 2.04
RUNX1T1-206ENST00000517493 GRIN2BQ13224 1484 aa27.8■■■□□ 2.04
RUNX1T1-206ENST00000517493 SNAPC4Q5SXM2 1469 aa27.78■■■□□ 2.04
RUNX1T1-206ENST00000517493 CHD1O14646 1710 aa27.76■■■□□ 2.03
RUNX1T1-206ENST00000517493 MAGI1Q96QZ7 1491 aaPredicted RBP27.76■■■□□ 2.03
RUNX1T1-206ENST00000517493 ABCA10Q8WWZ4 1543 aa27.73■■■□□ 2.03
RUNX1T1-206ENST00000517493 GAPVD1Q14C86 1478 aa27.73■■■□□ 2.03
RUNX1T1-206ENST00000517493 CYB5RLQ6IPT4 315 aa27.72■■■□□ 2.03
RUNX1T1-206ENST00000517493 WRNQ14191 1432 aaPredicted RBP eCLIP27.71■■■□□ 2.03
RUNX1T1-206ENST00000517493 SYNJ2O15056 1496 aa27.68■■■□□ 2.02
RUNX1T1-206ENST00000517493 TOP2BQ02880 1626 aa27.61■■■□□ 2.01
RUNX1T1-206ENST00000517493 ABCA5Q8WWZ7 1642 aa27.58■■■□□ 2.01
RUNX1T1-206ENST00000517493 CLASP1Q7Z460 1538 aa27.57■■■□□ 2
RUNX1T1-206ENST00000517493 ARAP1Q96P48 1450 aa27.56■■■□□ 2
RUNX1T1-206ENST00000517493 SYNJ1O43426 1573 aa27.56■■■□□ 2
RUNX1T1-206ENST00000517493 BIVM-ERCC5R4GMW8 1640 aa27.56■■■□□ 2
RUNX1T1-206ENST00000517493 PBRM1Q86U86 1689 aa27.5■■□□□ 1.99
RUNX1T1-206ENST00000517493 GRIN2AQ12879 1464 aa27.42■■□□□ 1.98
RUNX1T1-206ENST00000517493 FHAD1B1AJZ9 1412 aa27.41■■□□□ 1.98
RUNX1T1-206ENST00000517493 ERICH3Q5RHP9 1530 aa27.37■■□□□ 1.97
RUNX1T1-206ENST00000517493 NUP160Q12769 1436 aa27.36■■□□□ 1.97
RUNX1T1-206ENST00000517493 ADAMTS12P58397 1594 aa27.34■■□□□ 1.97
RUNX1T1-206ENST00000517493 TRHP20396 242 aaPredicted RBP27.29■■□□□ 1.96
RUNX1T1-206ENST00000517493 CEP170Q5SW79 1584 aa27.26■■□□□ 1.95
RUNX1T1-206ENST00000517493 IGF1RP08069 1367 aa27.21■■□□□ 1.95
RUNX1T1-206ENST00000517493 JPH4Q96JJ6 628 aa27.18■■□□□ 1.94
RUNX1T1-206ENST00000517493 KIF27Q86VH2 1401 aa27.16■■□□□ 1.94
RUNX1T1-206ENST00000517493 ERCC6L2Q5T890 1561 aa27.15■■□□□ 1.94
RUNX1T1-206ENST00000517493 SHROOM2Q13796 1616 aa27.12■■□□□ 1.93
RUNX1T1-206ENST00000517493 PRG4Q92954 1404 aaPredicted RBP27.08■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 119.5 ms