RNA–Protein interactions for RNA: ENST00000517487.5

CCNE2-203, Transcript of cyclin E2, humanhuman

TSL 3

Gene CCNE2, Length 830 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE2-203ENST00000517487 NISCHQ9Y2I1 1504 aa40.47■■■■■ 4.07
CCNE2-203ENST00000517487 ABCC9O60706 1549 aa36.91■■■■□ 3.5
CCNE2-203ENST00000517487 CCDC180Q9P1Z9 1646 aa36.56■■■■□ 3.44
CCNE2-203ENST00000517487 DNAJC5BQ9UF47 199 aa35.09■■■■□ 3.21
CCNE2-203ENST00000517487 RB1CC1Q8TDY2 1594 aa34.98■■■■□ 3.19
CCNE2-203ENST00000517487 NACADO15069 1562 aa34.66■■■■□ 3.14
CCNE2-203ENST00000517487 PABPN1Q86U42 306 aaKnown RBP eCLIP34.25■■■■□ 3.07
CCNE2-203ENST00000517487 UNC13AQ9UPW8 1703 aa34.23■■■■□ 3.07
CCNE2-203ENST00000517487 DCAF8L2P0C7V8 631 aa34.18■■■■□ 3.06
CCNE2-203ENST00000517487 MYO15BQ96JP2 1530 aa34.09■■■■□ 3.05
CCNE2-203ENST00000517487 BICRAQ9NZM4 1560 aa34.02■■■■□ 3.04
CCNE2-203ENST00000517487 SHROOM4Q9ULL8 1493 aa33.55■■■□□ 2.96
CCNE2-203ENST00000517487 DCAF1Q9Y4B6 1507 aa33.46■■■□□ 2.95
CCNE2-203ENST00000517487 ZCCHC6Q5VYS8 1495 aaKnown RBP33.44■■■□□ 2.94
CCNE2-203ENST00000517487 CC2D2AQ9P2K1 1620 aa33.37■■■□□ 2.93
CCNE2-203ENST00000517487 CECR2Q9BXF3 1484 aa33.32■■■□□ 2.92
CCNE2-203ENST00000517487 EIF4G1Q04637 1599 aaKnown RBP33.19■■■□□ 2.9
CCNE2-203ENST00000517487 SCRIBQ14160 1630 aa33.17■■■□□ 2.9
CCNE2-203ENST00000517487 DNAJC5Q9H3Z4 198 aa32.59■■■□□ 2.81
CCNE2-203ENST00000517487 CUX2O14529 1486 aa32.07■■■□□ 2.72
CCNE2-203ENST00000517487 NCAPD3P42695 1498 aa32.02■■■□□ 2.72
CCNE2-203ENST00000517487 ERCC6Q03468 1493 aa31.87■■■□□ 2.69
CCNE2-203ENST00000517487 ATAD2BQ9ULI0 1458 aa31.82■■■□□ 2.68
CCNE2-203ENST00000517487 HMGXB3Q12766 1538 aa31.72■■■□□ 2.67
CCNE2-203ENST00000517487 SMARCA2P51531 1590 aa31.7■■■□□ 2.67
CCNE2-203ENST00000517487 SMARCA4P51532 1647 aa31.66■■■□□ 2.66
CCNE2-203ENST00000517487 NESP48681 1621 aa31.59■■■□□ 2.65
CCNE2-203ENST00000517487 BAZ1BQ9UIG0 1483 aaKnown RBP31.44■■■□□ 2.62
CCNE2-203ENST00000517487 BAZ1AQ9NRL2 1556 aaPredicted RBP31.43■■■□□ 2.62
CCNE2-203ENST00000517487 THOC2Q8NI27 1593 aaKnown RBP31.42■■■□□ 2.62
CCNE2-203ENST00000517487 PEG3Q9GZU2 1588 aa31.42■■■□□ 2.62
CCNE2-203ENST00000517487 LAMC3Q9Y6N6 1575 aa31.34■■■□□ 2.61
CCNE2-203ENST00000517487 KIF21AQ7Z4S6 1674 aa31.19■■■□□ 2.58
CCNE2-203ENST00000517487 MROH2BQ7Z745 1585 aa31.16■■■□□ 2.58
CCNE2-203ENST00000517487 PDS5BQ9NTI5 1447 aa31.15■■■□□ 2.58
CCNE2-203ENST00000517487 CADPSQ9ULU8 1353 aa30.98■■■□□ 2.55
CCNE2-203ENST00000517487 MRC2Q9UBG0 1479 aa30.91■■■□□ 2.54
CCNE2-203ENST00000517487 WDR62O43379 1518 aa30.88■■■□□ 2.53
CCNE2-203ENST00000517487 TRIM41Q8WV44 630 aa30.83■■■□□ 2.53
CCNE2-203ENST00000517487 WIZO95785 1651 aa30.74■■■□□ 2.51
CCNE2-203ENST00000517487 CEP164Q9UPV0 1460 aa30.68■■■□□ 2.5
CCNE2-203ENST00000517487 FANCD2Q9BXW9 1451 aa30.61■■■□□ 2.49
CCNE2-203ENST00000517487 CFTRP13569 1480 aa30.55■■■□□ 2.48
CCNE2-203ENST00000517487 OSCARQ8IYS5 282 aa30.48■■■□□ 2.47
CCNE2-203ENST00000517487 URB2Q14146 1524 aaKnown RBP30.4■■■□□ 2.46
CCNE2-203ENST00000517487 TOP2AP11388 1531 aaKnown RBP30.34■■■□□ 2.45
CCNE2-203ENST00000517487 RSF1Q96T23 1441 aaPredicted RBP30.34■■■□□ 2.45
CCNE2-203ENST00000517487 PRDM2Q13029 1718 aa30.22■■■□□ 2.43
CCNE2-203ENST00000517487 RIMBP3CA6NJZ7 1639 aa30.16■■■□□ 2.42
CCNE2-203ENST00000517487 RIMBP3BA6NNM3 1639 aa30.16■■■□□ 2.42
CCNE2-203ENST00000517487 RIMBP3Q9UFD9 1639 aa30.16■■■□□ 2.42
CCNE2-203ENST00000517487 IFT140Q96RY7 1462 aa30.11■■■□□ 2.41
CCNE2-203ENST00000517487 ZNF608Q9ULD9 1512 aaPredicted RBP30.09■■■□□ 2.41
CCNE2-203ENST00000517487 ARHGEF11O15085 1522 aa30.01■■■□□ 2.4
CCNE2-203ENST00000517487 CCDC88BA6NC98 1476 aa29.99■■■□□ 2.39
CCNE2-203ENST00000517487 TOPBP1Q92547 1522 aa29.99■■■□□ 2.39
CCNE2-203ENST00000517487 ABCC8Q09428 1581 aa29.92■■■□□ 2.38
CCNE2-203ENST00000517487 EIF4G3O43432 1585 aaKnown RBP29.9■■■□□ 2.38
CCNE2-203ENST00000517487 DNMBPQ6XZF7 1577 aa29.85■■■□□ 2.37
CCNE2-203ENST00000517487 TARBP1Q13395 1621 aaKnown RBP29.79■■■□□ 2.36
CCNE2-203ENST00000517487 CHD1O14646 1710 aa29.78■■■□□ 2.36
CCNE2-203ENST00000517487 CYB5RLQ6IPT4 315 aa29.76■■■□□ 2.35
CCNE2-203ENST00000517487 AQRO60306 1485 aaKnown RBP eCLIP29.74■■■□□ 2.35
CCNE2-203ENST00000517487 ARAP1Q96P48 1450 aa29.69■■■□□ 2.34
CCNE2-203ENST00000517487 POLA1P09884 1462 aaPredicted RBP29.65■■■□□ 2.34
CCNE2-203ENST00000517487 FBLN2P98095 1184 aa29.55■■■□□ 2.32
CCNE2-203ENST00000517487 TRHP20396 242 aaPredicted RBP29.53■■■□□ 2.32
CCNE2-203ENST00000517487 RAD54L2Q9Y4B4 1467 aa29.52■■■□□ 2.32
CCNE2-203ENST00000517487 SOGA1O94964 1423 aa29.49■■■□□ 2.31
CCNE2-203ENST00000517487 WDR97A6NE52 1622 aa29.48■■■□□ 2.31
CCNE2-203ENST00000517487 TDRD9Q8NDG6 1382 aaKnown RBP29.47■■■□□ 2.31
CCNE2-203ENST00000517487 CLASP1Q7Z460 1538 aa29.45■■■□□ 2.31
CCNE2-203ENST00000517487 SNAPC4Q5SXM2 1469 aa29.42■■■□□ 2.3
CCNE2-203ENST00000517487 FGD5Q6ZNL6 1462 aa29.38■■■□□ 2.29
CCNE2-203ENST00000517487 MAGI1Q96QZ7 1491 aaPredicted RBP29.36■■■□□ 2.29
CCNE2-203ENST00000517487 SYNJ1O43426 1573 aa29.35■■■□□ 2.29
CCNE2-203ENST00000517487 CHMP7Q8WUX9 453 aaPredicted RBP29.31■■■□□ 2.28
CCNE2-203ENST00000517487 GRIN2BQ13224 1484 aa29.3■■■□□ 2.28
CCNE2-203ENST00000517487 CUX1P39880 1505 aa29.3■■■□□ 2.28
CCNE2-203ENST00000517487 SYNJ2O15056 1496 aa29.27■■■□□ 2.28
CCNE2-203ENST00000517487 PBRM1Q86U86 1689 aa29.15■■■□□ 2.26
CCNE2-203ENST00000517487 GAPVD1Q14C86 1478 aa29.13■■■□□ 2.25
CCNE2-203ENST00000517487 ABCA5Q8WWZ7 1642 aa29.06■■■□□ 2.24
CCNE2-203ENST00000517487 ABCA10Q8WWZ4 1543 aa29.06■■■□□ 2.24
CCNE2-203ENST00000517487 AEBP2Q6ZN18 517 aaPredicted RBP29.02■■■□□ 2.24
CCNE2-203ENST00000517487 ERCC6L2Q5T890 1561 aa28.92■■■□□ 2.22
CCNE2-203ENST00000517487 GRIN2AQ12879 1464 aa28.92■■■□□ 2.22
CCNE2-203ENST00000517487 NUP160Q12769 1436 aa28.88■■■□□ 2.21
CCNE2-203ENST00000517487 CEP170Q5SW79 1584 aa28.86■■■□□ 2.21
CCNE2-203ENST00000517487 ADAMTS12P58397 1594 aa28.85■■■□□ 2.21
CCNE2-203ENST00000517487 SHROOM2Q13796 1616 aa28.83■■■□□ 2.21
CCNE2-203ENST00000517487 WRNQ14191 1432 aaPredicted RBP eCLIP28.81■■■□□ 2.2
CCNE2-203ENST00000517487 FHAD1B1AJZ9 1412 aa28.75■■■□□ 2.19
CCNE2-203ENST00000517487 BIVM-ERCC5R4GMW8 1640 aa28.73■■■□□ 2.19
CCNE2-203ENST00000517487 TOP2BQ02880 1626 aa28.72■■■□□ 2.19
CCNE2-203ENST00000517487 KIF13AQ9H1H9 1805 aa28.69■■■□□ 2.18
CCNE2-203ENST00000517487 ERICH3Q5RHP9 1530 aa28.69■■■□□ 2.18
CCNE2-203ENST00000517487 PRG4Q92954 1404 aaPredicted RBP28.59■■■□□ 2.17
CCNE2-203ENST00000517487 JPH4Q96JJ6 628 aa28.54■■■□□ 2.16
CCNE2-203ENST00000517487 SUPT5HO00267 1087 aaKnown RBP28.51■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms