RNA–Protein interactions for RNA: ENST00000517210.1

RN7SKP35-201, Transcript of RNA, 7SK small nuclear pseudogene 35, humanhuman

BASIC

Gene RN7SKP35, Length 151 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP35-201ENST00000517210 NISCHQ9Y2I1 1504 aa15.53■□□□□ 0.08
RN7SKP35-201ENST00000517210 ABCC9O60706 1549 aa13.88□□□□□ -0.19
RN7SKP35-201ENST00000517210 CCDC180Q9P1Z9 1646 aa13.87□□□□□ -0.19
RN7SKP35-201ENST00000517210 RB1CC1Q8TDY2 1594 aa13.15□□□□□ -0.3
RN7SKP35-201ENST00000517210 DCAF8L2P0C7V8 631 aa13.08□□□□□ -0.32
RN7SKP35-201ENST00000517210 NACADO15069 1562 aa13.07□□□□□ -0.32
RN7SKP35-201ENST00000517210 DNAJC5BQ9UF47 199 aa13.01□□□□□ -0.33
RN7SKP35-201ENST00000517210 UNC13AQ9UPW8 1703 aa12.99□□□□□ -0.33
RN7SKP35-201ENST00000517210 PABPN1Q86U42 306 aaKnown RBP eCLIP12.95□□□□□ -0.34
RN7SKP35-201ENST00000517210 ZCCHC6Q5VYS8 1495 aaKnown RBP12.88□□□□□ -0.35
RN7SKP35-201ENST00000517210 MYO15BQ96JP2 1530 aa12.88□□□□□ -0.35
RN7SKP35-201ENST00000517210 BICRAQ9NZM4 1560 aa12.87□□□□□ -0.35
RN7SKP35-201ENST00000517210 DCAF1Q9Y4B6 1507 aa12.77□□□□□ -0.37
RN7SKP35-201ENST00000517210 SCRIBQ14160 1630 aa12.73□□□□□ -0.37
RN7SKP35-201ENST00000517210 CC2D2AQ9P2K1 1620 aa12.53□□□□□ -0.4
RN7SKP35-201ENST00000517210 SHROOM4Q9ULL8 1493 aa12.53□□□□□ -0.4
RN7SKP35-201ENST00000517210 EIF4G1Q04637 1599 aaKnown RBP12.5□□□□□ -0.41
RN7SKP35-201ENST00000517210 CECR2Q9BXF3 1484 aa12.45□□□□□ -0.42
RN7SKP35-201ENST00000517210 SMARCA4P51532 1647 aa12.11□□□□□ -0.47
RN7SKP35-201ENST00000517210 ATAD2BQ9ULI0 1458 aa12.08□□□□□ -0.47
RN7SKP35-201ENST00000517210 NCAPD3P42695 1498 aa12.08□□□□□ -0.48
RN7SKP35-201ENST00000517210 MROH2BQ7Z745 1585 aa12.01□□□□□ -0.49
RN7SKP35-201ENST00000517210 SMARCA2P51531 1590 aa12.01□□□□□ -0.49
RN7SKP35-201ENST00000517210 BAZ1AQ9NRL2 1556 aaPredicted RBP12.01□□□□□ -0.49
RN7SKP35-201ENST00000517210 HMGXB3Q12766 1538 aa11.99□□□□□ -0.49
RN7SKP35-201ENST00000517210 NESP48681 1621 aa11.98□□□□□ -0.49
RN7SKP35-201ENST00000517210 BAZ1BQ9UIG0 1483 aaKnown RBP11.95□□□□□ -0.5
RN7SKP35-201ENST00000517210 PEG3Q9GZU2 1588 aa11.95□□□□□ -0.5
RN7SKP35-201ENST00000517210 ERCC6Q03468 1493 aa11.9□□□□□ -0.5
RN7SKP35-201ENST00000517210 WIZO95785 1651 aa11.89□□□□□ -0.51
RN7SKP35-201ENST00000517210 CUX2O14529 1486 aa11.83□□□□□ -0.52
RN7SKP35-201ENST00000517210 KIF21AQ7Z4S6 1674 aa11.81□□□□□ -0.52
RN7SKP35-201ENST00000517210 THOC2Q8NI27 1593 aaKnown RBP11.8□□□□□ -0.52
RN7SKP35-201ENST00000517210 LAMC3Q9Y6N6 1575 aa11.79□□□□□ -0.52
RN7SKP35-201ENST00000517210 DNAJC5Q9H3Z4 198 aa11.79□□□□□ -0.52
RN7SKP35-201ENST00000517210 RSF1Q96T23 1441 aaPredicted RBP11.76□□□□□ -0.53
RN7SKP35-201ENST00000517210 CADPSQ9ULU8 1353 aa11.71□□□□□ -0.53
RN7SKP35-201ENST00000517210 PDS5BQ9NTI5 1447 aa11.69□□□□□ -0.54
RN7SKP35-201ENST00000517210 TOP2AP11388 1531 aaKnown RBP11.67□□□□□ -0.54
RN7SKP35-201ENST00000517210 MRC2Q9UBG0 1479 aa11.63□□□□□ -0.55
RN7SKP35-201ENST00000517210 WDR62O43379 1518 aa11.62□□□□□ -0.55
RN7SKP35-201ENST00000517210 CFTRP13569 1480 aa11.61□□□□□ -0.55
RN7SKP35-201ENST00000517210 FANCD2Q9BXW9 1451 aa11.61□□□□□ -0.55
RN7SKP35-201ENST00000517210 CEP164Q9UPV0 1460 aa11.6□□□□□ -0.55
RN7SKP35-201ENST00000517210 CCDC88BA6NC98 1476 aa11.57□□□□□ -0.56
RN7SKP35-201ENST00000517210 URB2Q14146 1524 aaKnown RBP11.56□□□□□ -0.56
RN7SKP35-201ENST00000517210 PRDM2Q13029 1718 aa11.54□□□□□ -0.56
RN7SKP35-201ENST00000517210 ZNF608Q9ULD9 1512 aaPredicted RBP11.42□□□□□ -0.58
RN7SKP35-201ENST00000517210 TOPBP1Q92547 1522 aa11.41□□□□□ -0.58
RN7SKP35-201ENST00000517210 DNMBPQ6XZF7 1577 aa11.36□□□□□ -0.59
RN7SKP35-201ENST00000517210 IFT140Q96RY7 1462 aa11.35□□□□□ -0.59
RN7SKP35-201ENST00000517210 TRIM41Q8WV44 630 aa11.34□□□□□ -0.59
RN7SKP35-201ENST00000517210 EIF4G3O43432 1585 aaKnown RBP11.33□□□□□ -0.6
RN7SKP35-201ENST00000517210 TARBP1Q13395 1621 aaKnown RBP11.33□□□□□ -0.6
RN7SKP35-201ENST00000517210 SUPT5HO00267 1087 aaKnown RBP11.3□□□□□ -0.6
RN7SKP35-201ENST00000517210 OSCARQ8IYS5 282 aa11.3□□□□□ -0.6
RN7SKP35-201ENST00000517210 AQRO60306 1485 aaKnown RBP eCLIP11.3□□□□□ -0.6
RN7SKP35-201ENST00000517210 POLA1P09884 1462 aaPredicted RBP11.3□□□□□ -0.6
RN7SKP35-201ENST00000517210 RAD54L2Q9Y4B4 1467 aa11.3□□□□□ -0.6
RN7SKP35-201ENST00000517210 ABCC8Q09428 1581 aa11.29□□□□□ -0.6
RN7SKP35-201ENST00000517210 CUX1P39880 1505 aa11.29□□□□□ -0.6
RN7SKP35-201ENST00000517210 CHD1O14646 1710 aa11.27□□□□□ -0.61
RN7SKP35-201ENST00000517210 RIMBP3CA6NJZ7 1639 aa11.25□□□□□ -0.61
RN7SKP35-201ENST00000517210 RIMBP3BA6NNM3 1639 aa11.25□□□□□ -0.61
RN7SKP35-201ENST00000517210 RIMBP3Q9UFD9 1639 aa11.25□□□□□ -0.61
RN7SKP35-201ENST00000517210 FGD5Q6ZNL6 1462 aa11.25□□□□□ -0.61
RN7SKP35-201ENST00000517210 TDRD9Q8NDG6 1382 aaKnown RBP11.23□□□□□ -0.61
RN7SKP35-201ENST00000517210 SOGA1O94964 1423 aa11.22□□□□□ -0.61
RN7SKP35-201ENST00000517210 WDR97A6NE52 1622 aa11.19□□□□□ -0.62
RN7SKP35-201ENST00000517210 ARHGEF11O15085 1522 aa11.18□□□□□ -0.62
RN7SKP35-201ENST00000517210 SNAPC4Q5SXM2 1469 aa11.18□□□□□ -0.62
RN7SKP35-201ENST00000517210 FBLN2P98095 1184 aa11.17□□□□□ -0.62
RN7SKP35-201ENST00000517210 PBRM1Q86U86 1689 aa11.14□□□□□ -0.63
RN7SKP35-201ENST00000517210 SYNJ1O43426 1573 aa11.12□□□□□ -0.63
RN7SKP35-201ENST00000517210 ABCA5Q8WWZ7 1642 aa11.11□□□□□ -0.63
RN7SKP35-201ENST00000517210 GRIN2BQ13224 1484 aa11.11□□□□□ -0.63
RN7SKP35-201ENST00000517210 ARAP1Q96P48 1450 aa11.11□□□□□ -0.63
RN7SKP35-201ENST00000517210 CLASP1Q7Z460 1538 aa11.1□□□□□ -0.63
RN7SKP35-201ENST00000517210 GAPVD1Q14C86 1478 aa11.09□□□□□ -0.63
RN7SKP35-201ENST00000517210 CYB5RLQ6IPT4 315 aa11.09□□□□□ -0.63
RN7SKP35-201ENST00000517210 BIVM-ERCC5R4GMW8 1640 aa11.09□□□□□ -0.63
RN7SKP35-201ENST00000517210 ABCA10Q8WWZ4 1543 aa11.09□□□□□ -0.63
RN7SKP35-201ENST00000517210 MAGI1Q96QZ7 1491 aaPredicted RBP11.08□□□□□ -0.64
RN7SKP35-201ENST00000517210 TOP2BQ02880 1626 aa11.07□□□□□ -0.64
RN7SKP35-201ENST00000517210 SYNJ2O15056 1496 aa11.06□□□□□ -0.64
RN7SKP35-201ENST00000517210 CHMP7Q8WUX9 453 aaPredicted RBP11.06□□□□□ -0.64
RN7SKP35-201ENST00000517210 WRNQ14191 1432 aaPredicted RBP eCLIP11.05□□□□□ -0.64
RN7SKP35-201ENST00000517210 ADAMTS12P58397 1594 aa11.02□□□□□ -0.65
RN7SKP35-201ENST00000517210 ERCC6L2Q5T890 1561 aa11.01□□□□□ -0.65
RN7SKP35-201ENST00000517210 CEP170Q5SW79 1584 aa10.99□□□□□ -0.65
RN7SKP35-201ENST00000517210 GRIN2AQ12879 1464 aa10.98□□□□□ -0.65
RN7SKP35-201ENST00000517210 NUP160Q12769 1436 aa10.94□□□□□ -0.66
RN7SKP35-201ENST00000517210 ERICH3Q5RHP9 1530 aa10.94□□□□□ -0.66
RN7SKP35-201ENST00000517210 FHAD1B1AJZ9 1412 aa10.93□□□□□ -0.66
RN7SKP35-201ENST00000517210 SHROOM2Q13796 1616 aa10.91□□□□□ -0.66
RN7SKP35-201ENST00000517210 TRHP20396 242 aaPredicted RBP10.91□□□□□ -0.66
RN7SKP35-201ENST00000517210 RUSC2Q8N2Y8 1516 aa10.86□□□□□ -0.67
RN7SKP35-201ENST00000517210 IGF1RP08069 1367 aa10.85□□□□□ -0.67
RN7SKP35-201ENST00000517210 PRG4Q92954 1404 aaPredicted RBP10.84□□□□□ -0.67
RN7SKP35-201ENST00000517210 JPH4Q96JJ6 628 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms