RNA–Protein interactions for RNA: ENST00000516913.1

SCARNA20.3-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 131 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.3-201ENST00000516913 NISCHQ9Y2I1 1504 aa21.13■□□□□ 0.97
SCARNA20.3-201ENST00000516913 ABCC9O60706 1549 aa19.1■□□□□ 0.65
SCARNA20.3-201ENST00000516913 CCDC180Q9P1Z9 1646 aa18.8■□□□□ 0.6
SCARNA20.3-201ENST00000516913 DNAJC5BQ9UF47 199 aa18.23■□□□□ 0.51
SCARNA20.3-201ENST00000516913 RB1CC1Q8TDY2 1594 aa17.96■□□□□ 0.47
SCARNA20.3-201ENST00000516913 DCAF8L2P0C7V8 631 aa17.88■□□□□ 0.45
SCARNA20.3-201ENST00000516913 PABPN1Q86U42 306 aaKnown RBP eCLIP17.87■□□□□ 0.45
SCARNA20.3-201ENST00000516913 NACADO15069 1562 aa17.85■□□□□ 0.45
SCARNA20.3-201ENST00000516913 BICRAQ9NZM4 1560 aa17.66■□□□□ 0.42
SCARNA20.3-201ENST00000516913 UNC13AQ9UPW8 1703 aa17.62■□□□□ 0.41
SCARNA20.3-201ENST00000516913 MYO15BQ96JP2 1530 aa17.6■□□□□ 0.41
SCARNA20.3-201ENST00000516913 ZCCHC6Q5VYS8 1495 aaKnown RBP17.49■□□□□ 0.39
SCARNA20.3-201ENST00000516913 DCAF1Q9Y4B6 1507 aa17.37■□□□□ 0.37
SCARNA20.3-201ENST00000516913 SCRIBQ14160 1630 aa17.26■□□□□ 0.35
SCARNA20.3-201ENST00000516913 CC2D2AQ9P2K1 1620 aa17.18■□□□□ 0.34
SCARNA20.3-201ENST00000516913 CECR2Q9BXF3 1484 aa17.17■□□□□ 0.34
SCARNA20.3-201ENST00000516913 SHROOM4Q9ULL8 1493 aa17.15■□□□□ 0.34
SCARNA20.3-201ENST00000516913 EIF4G1Q04637 1599 aaKnown RBP17.13■□□□□ 0.33
SCARNA20.3-201ENST00000516913 NCAPD3P42695 1498 aa16.61■□□□□ 0.25
SCARNA20.3-201ENST00000516913 DNAJC5Q9H3Z4 198 aa16.6■□□□□ 0.25
SCARNA20.3-201ENST00000516913 ATAD2BQ9ULI0 1458 aa16.56■□□□□ 0.24
SCARNA20.3-201ENST00000516913 NESP48681 1621 aa16.45■□□□□ 0.22
SCARNA20.3-201ENST00000516913 SMARCA4P51532 1647 aa16.45■□□□□ 0.22
SCARNA20.3-201ENST00000516913 HMGXB3Q12766 1538 aa16.37■□□□□ 0.21
SCARNA20.3-201ENST00000516913 SMARCA2P51531 1590 aa16.35■□□□□ 0.21
SCARNA20.3-201ENST00000516913 MROH2BQ7Z745 1585 aa16.35■□□□□ 0.21
SCARNA20.3-201ENST00000516913 CUX2O14529 1486 aa16.35■□□□□ 0.21
SCARNA20.3-201ENST00000516913 ERCC6Q03468 1493 aa16.34■□□□□ 0.21
SCARNA20.3-201ENST00000516913 BAZ1AQ9NRL2 1556 aaPredicted RBP16.3■□□□□ 0.2
SCARNA20.3-201ENST00000516913 BAZ1BQ9UIG0 1483 aaKnown RBP16.29■□□□□ 0.2
SCARNA20.3-201ENST00000516913 PEG3Q9GZU2 1588 aa16.29■□□□□ 0.2
SCARNA20.3-201ENST00000516913 THOC2Q8NI27 1593 aaKnown RBP16.17■□□□□ 0.18
SCARNA20.3-201ENST00000516913 LAMC3Q9Y6N6 1575 aa16.1■□□□□ 0.17
SCARNA20.3-201ENST00000516913 CADPSQ9ULU8 1353 aa16.1■□□□□ 0.17
SCARNA20.3-201ENST00000516913 WIZO95785 1651 aa16.08■□□□□ 0.17
SCARNA20.3-201ENST00000516913 KIF21AQ7Z4S6 1674 aa16.08■□□□□ 0.16
SCARNA20.3-201ENST00000516913 PDS5BQ9NTI5 1447 aa16.04■□□□□ 0.16
SCARNA20.3-201ENST00000516913 RSF1Q96T23 1441 aaPredicted RBP16■□□□□ 0.15
SCARNA20.3-201ENST00000516913 MRC2Q9UBG0 1479 aa15.95■□□□□ 0.14
SCARNA20.3-201ENST00000516913 WDR62O43379 1518 aa15.92■□□□□ 0.14
SCARNA20.3-201ENST00000516913 CFTRP13569 1480 aa15.9■□□□□ 0.14
SCARNA20.3-201ENST00000516913 FANCD2Q9BXW9 1451 aa15.88■□□□□ 0.13
SCARNA20.3-201ENST00000516913 CEP164Q9UPV0 1460 aa15.83■□□□□ 0.12
SCARNA20.3-201ENST00000516913 URB2Q14146 1524 aaKnown RBP15.83■□□□□ 0.12
SCARNA20.3-201ENST00000516913 TOP2AP11388 1531 aaKnown RBP15.81■□□□□ 0.12
SCARNA20.3-201ENST00000516913 TRIM41Q8WV44 630 aa15.8■□□□□ 0.12
SCARNA20.3-201ENST00000516913 CCDC88BA6NC98 1476 aa15.75■□□□□ 0.11
SCARNA20.3-201ENST00000516913 ZNF608Q9ULD9 1512 aaPredicted RBP15.68■□□□□ 0.1
SCARNA20.3-201ENST00000516913 OSCARQ8IYS5 282 aa15.66■□□□□ 0.1
SCARNA20.3-201ENST00000516913 TOPBP1Q92547 1522 aa15.58■□□□□ 0.09
SCARNA20.3-201ENST00000516913 IFT140Q96RY7 1462 aa15.53■□□□□ 0.08
SCARNA20.3-201ENST00000516913 AQRO60306 1485 aaKnown RBP eCLIP15.52■□□□□ 0.07
SCARNA20.3-201ENST00000516913 PRDM2Q13029 1718 aa15.48■□□□□ 0.07
SCARNA20.3-201ENST00000516913 RAD54L2Q9Y4B4 1467 aa15.46■□□□□ 0.07
SCARNA20.3-201ENST00000516913 RIMBP3CA6NJZ7 1639 aa15.46■□□□□ 0.06
SCARNA20.3-201ENST00000516913 RIMBP3BA6NNM3 1639 aa15.46■□□□□ 0.06
SCARNA20.3-201ENST00000516913 TARBP1Q13395 1621 aaKnown RBP15.46■□□□□ 0.06
SCARNA20.3-201ENST00000516913 RIMBP3Q9UFD9 1639 aa15.46■□□□□ 0.06
SCARNA20.3-201ENST00000516913 POLA1P09884 1462 aaPredicted RBP15.45■□□□□ 0.06
SCARNA20.3-201ENST00000516913 DNMBPQ6XZF7 1577 aa15.45■□□□□ 0.06
SCARNA20.3-201ENST00000516913 EIF4G3O43432 1585 aaKnown RBP15.43■□□□□ 0.06
SCARNA20.3-201ENST00000516913 ARHGEF11O15085 1522 aa15.43■□□□□ 0.06
SCARNA20.3-201ENST00000516913 TDRD9Q8NDG6 1382 aaKnown RBP15.41■□□□□ 0.06
SCARNA20.3-201ENST00000516913 ABCC8Q09428 1581 aa15.39■□□□□ 0.05
SCARNA20.3-201ENST00000516913 CYB5RLQ6IPT4 315 aa15.37■□□□□ 0.05
SCARNA20.3-201ENST00000516913 SOGA1O94964 1423 aa15.34■□□□□ 0.05
SCARNA20.3-201ENST00000516913 CUX1P39880 1505 aa15.34■□□□□ 0.05
SCARNA20.3-201ENST00000516913 FBLN2P98095 1184 aa15.33■□□□□ 0.04
SCARNA20.3-201ENST00000516913 ARAP1Q96P48 1450 aa15.33■□□□□ 0.04
SCARNA20.3-201ENST00000516913 FGD5Q6ZNL6 1462 aa15.32■□□□□ 0.04
SCARNA20.3-201ENST00000516913 CHD1O14646 1710 aa15.3■□□□□ 0.04
SCARNA20.3-201ENST00000516913 SNAPC4Q5SXM2 1469 aa15.27■□□□□ 0.03
SCARNA20.3-201ENST00000516913 CLASP1Q7Z460 1538 aa15.22■□□□□ 0.03
SCARNA20.3-201ENST00000516913 SUPT5HO00267 1087 aaKnown RBP15.21■□□□□ 0.03
SCARNA20.3-201ENST00000516913 CHMP7Q8WUX9 453 aaPredicted RBP15.18■□□□□ 0.02
SCARNA20.3-201ENST00000516913 GRIN2BQ13224 1484 aa15.17■□□□□ 0.02
SCARNA20.3-201ENST00000516913 MAGI1Q96QZ7 1491 aaPredicted RBP15.14■□□□□ 0.01
SCARNA20.3-201ENST00000516913 WDR97A6NE52 1622 aa15.14■□□□□ 0.01
SCARNA20.3-201ENST00000516913 GAPVD1Q14C86 1478 aa15.14■□□□□ 0.01
SCARNA20.3-201ENST00000516913 SYNJ2O15056 1496 aa15.13■□□□□ 0.01
SCARNA20.3-201ENST00000516913 TRHP20396 242 aaPredicted RBP15.12■□□□□ 0.01
SCARNA20.3-201ENST00000516913 ABCA10Q8WWZ4 1543 aa15.12■□□□□ 0.01
SCARNA20.3-201ENST00000516913 ERCC6L2Q5T890 1561 aa15.1■□□□□ 0.01
SCARNA20.3-201ENST00000516913 ABCA5Q8WWZ7 1642 aa15.07■□□□□ 0
SCARNA20.3-201ENST00000516913 SYNJ1O43426 1573 aa15.05■□□□□ -0
SCARNA20.3-201ENST00000516913 PBRM1Q86U86 1689 aa15.02□□□□□ -0.01
SCARNA20.3-201ENST00000516913 NUP160Q12769 1436 aa15□□□□□ -0.01
SCARNA20.3-201ENST00000516913 WRNQ14191 1432 aaPredicted RBP eCLIP15□□□□□ -0.01
SCARNA20.3-201ENST00000516913 GRIN2AQ12879 1464 aa15□□□□□ -0.01
SCARNA20.3-201ENST00000516913 CEP170Q5SW79 1584 aa14.99□□□□□ -0.01
SCARNA20.3-201ENST00000516913 TOP2BQ02880 1626 aa14.97□□□□□ -0.01
SCARNA20.3-201ENST00000516913 ADAMTS12P58397 1594 aa14.96□□□□□ -0.01
SCARNA20.3-201ENST00000516913 BIVM-ERCC5R4GMW8 1640 aa14.95□□□□□ -0.02
SCARNA20.3-201ENST00000516913 FHAD1B1AJZ9 1412 aa14.92□□□□□ -0.02
SCARNA20.3-201ENST00000516913 SHROOM2Q13796 1616 aa14.88□□□□□ -0.03
SCARNA20.3-201ENST00000516913 ERICH3Q5RHP9 1530 aa14.87□□□□□ -0.03
SCARNA20.3-201ENST00000516913 JPH4Q96JJ6 628 aa14.86□□□□□ -0.03
SCARNA20.3-201ENST00000516913 PRG4Q92954 1404 aaPredicted RBP14.84□□□□□ -0.03
SCARNA20.3-201ENST00000516913 IGF1RP08069 1367 aa14.84□□□□□ -0.03
SCARNA20.3-201ENST00000516913 RUSC2Q8N2Y8 1516 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms