RNA–Protein interactions for RNA: ENST00000516559.1

RNA5SP43-201, Transcript of RNA, 5S ribosomal pseudogene 43, humanhuman

BASIC

Gene RNA5SP43, Length 110 nt, Biotype rRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNA5SP43-201ENST00000516559 NISCHQ9Y2I1 1504 aa12.27□□□□□ -0.44
RNA5SP43-201ENST00000516559 CCDC180Q9P1Z9 1646 aa10.9□□□□□ -0.66
RNA5SP43-201ENST00000516559 ABCC9O60706 1549 aa10.55□□□□□ -0.72
RNA5SP43-201ENST00000516559 ZCCHC6Q5VYS8 1495 aaKnown RBP10.26□□□□□ -0.77
RNA5SP43-201ENST00000516559 NACADO15069 1562 aa10.19□□□□□ -0.78
RNA5SP43-201ENST00000516559 RB1CC1Q8TDY2 1594 aa10.18□□□□□ -0.78
RNA5SP43-201ENST00000516559 MYO15BQ96JP2 1530 aa10.18□□□□□ -0.78
RNA5SP43-201ENST00000516559 DCAF1Q9Y4B6 1507 aa10.17□□□□□ -0.78
RNA5SP43-201ENST00000516559 DCAF8L2P0C7V8 631 aa10.11□□□□□ -0.79
RNA5SP43-201ENST00000516559 UNC13AQ9UPW8 1703 aa10.01□□□□□ -0.81
RNA5SP43-201ENST00000516559 SCRIBQ14160 1630 aa9.93□□□□□ -0.82
RNA5SP43-201ENST00000516559 BICRAQ9NZM4 1560 aa9.92□□□□□ -0.82
RNA5SP43-201ENST00000516559 PABPN1Q86U42 306 aaKnown RBP eCLIP9.84□□□□□ -0.83
RNA5SP43-201ENST00000516559 SHROOM4Q9ULL8 1493 aa9.8□□□□□ -0.84
RNA5SP43-201ENST00000516559 EIF4G1Q04637 1599 aaKnown RBP9.63□□□□□ -0.87
RNA5SP43-201ENST00000516559 DNAJC5BQ9UF47 199 aa9.61□□□□□ -0.87
RNA5SP43-201ENST00000516559 CC2D2AQ9P2K1 1620 aa9.56□□□□□ -0.88
RNA5SP43-201ENST00000516559 CECR2Q9BXF3 1484 aa9.56□□□□□ -0.88
RNA5SP43-201ENST00000516559 SMARCA4P51532 1647 aa9.52□□□□□ -0.89
RNA5SP43-201ENST00000516559 BAZ1AQ9NRL2 1556 aaPredicted RBP9.5□□□□□ -0.89
RNA5SP43-201ENST00000516559 MROH2BQ7Z745 1585 aa9.47□□□□□ -0.89
RNA5SP43-201ENST00000516559 PEG3Q9GZU2 1588 aa9.44□□□□□ -0.9
RNA5SP43-201ENST00000516559 ATAD2BQ9ULI0 1458 aa9.43□□□□□ -0.9
RNA5SP43-201ENST00000516559 SMARCA2P51531 1590 aa9.41□□□□□ -0.9
RNA5SP43-201ENST00000516559 NCAPD3P42695 1498 aa9.4□□□□□ -0.9
RNA5SP43-201ENST00000516559 HMGXB3Q12766 1538 aa9.39□□□□□ -0.91
RNA5SP43-201ENST00000516559 RSF1Q96T23 1441 aaPredicted RBP9.38□□□□□ -0.91
RNA5SP43-201ENST00000516559 WIZO95785 1651 aa9.37□□□□□ -0.91
RNA5SP43-201ENST00000516559 BAZ1BQ9UIG0 1483 aaKnown RBP9.34□□□□□ -0.91
RNA5SP43-201ENST00000516559 TOP2AP11388 1531 aaKnown RBP9.27□□□□□ -0.93
RNA5SP43-201ENST00000516559 NESP48681 1621 aa9.17□□□□□ -0.94
RNA5SP43-201ENST00000516559 LAMC3Q9Y6N6 1575 aa9.15□□□□□ -0.95
RNA5SP43-201ENST00000516559 CCDC88BA6NC98 1476 aa9.14□□□□□ -0.95
RNA5SP43-201ENST00000516559 SUPT5HO00267 1087 aaKnown RBP9.12□□□□□ -0.95
RNA5SP43-201ENST00000516559 CADPSQ9ULU8 1353 aa9.12□□□□□ -0.95
RNA5SP43-201ENST00000516559 CFTRP13569 1480 aa9.11□□□□□ -0.95
RNA5SP43-201ENST00000516559 KIF21AQ7Z4S6 1674 aa9.08□□□□□ -0.96
RNA5SP43-201ENST00000516559 PRDM2Q13029 1718 aa9.07□□□□□ -0.96
RNA5SP43-201ENST00000516559 ERCC6Q03468 1493 aa9.06□□□□□ -0.96
RNA5SP43-201ENST00000516559 PDS5BQ9NTI5 1447 aa9.05□□□□□ -0.96
RNA5SP43-201ENST00000516559 THOC2Q8NI27 1593 aaKnown RBP9.04□□□□□ -0.96
RNA5SP43-201ENST00000516559 FANCD2Q9BXW9 1451 aa9.02□□□□□ -0.96
RNA5SP43-201ENST00000516559 CEP164Q9UPV0 1460 aa9.01□□□□□ -0.97
RNA5SP43-201ENST00000516559 MRC2Q9UBG0 1479 aa8.99□□□□□ -0.97
RNA5SP43-201ENST00000516559 WDR62O43379 1518 aa8.98□□□□□ -0.97
RNA5SP43-201ENST00000516559 CUX2O14529 1486 aa8.96□□□□□ -0.97
RNA5SP43-201ENST00000516559 URB2Q14146 1524 aaKnown RBP8.95□□□□□ -0.98
RNA5SP43-201ENST00000516559 DNMBPQ6XZF7 1577 aa8.9□□□□□ -0.98
RNA5SP43-201ENST00000516559 TOPBP1Q92547 1522 aa8.9□□□□□ -0.99
RNA5SP43-201ENST00000516559 ABCC8Q09428 1581 aa8.87□□□□□ -0.99
RNA5SP43-201ENST00000516559 CUX1P39880 1505 aa8.87□□□□□ -0.99
RNA5SP43-201ENST00000516559 SYNJ1O43426 1573 aa8.84□□□□□ -0.99
RNA5SP43-201ENST00000516559 BIVM-ERCC5R4GMW8 1640 aa8.83□□□□□ -1
RNA5SP43-201ENST00000516559 POLA1P09884 1462 aaPredicted RBP8.83□□□□□ -1
RNA5SP43-201ENST00000516559 TARBP1Q13395 1621 aaKnown RBP8.83□□□□□ -1
RNA5SP43-201ENST00000516559 FGD5Q6ZNL6 1462 aa8.83□□□□□ -1
RNA5SP43-201ENST00000516559 WRNQ14191 1432 aaPredicted RBP eCLIP8.82□□□□□ -1
RNA5SP43-201ENST00000516559 TOP2BQ02880 1626 aa8.82□□□□□ -1
RNA5SP43-201ENST00000516559 IFT140Q96RY7 1462 aa8.82□□□□□ -1
RNA5SP43-201ENST00000516559 WDR97A6NE52 1622 aa8.79□□□□□ -1
RNA5SP43-201ENST00000516559 ZNF608Q9ULD9 1512 aaPredicted RBP8.79□□□□□ -1
RNA5SP43-201ENST00000516559 RAD54L2Q9Y4B4 1467 aa8.78□□□□□ -1
RNA5SP43-201ENST00000516559 EIF4G3O43432 1585 aaKnown RBP8.77□□□□□ -1.01
RNA5SP43-201ENST00000516559 SOGA1O94964 1423 aa8.76□□□□□ -1.01
RNA5SP43-201ENST00000516559 ABCA10Q8WWZ4 1543 aa8.74□□□□□ -1.01
RNA5SP43-201ENST00000516559 ABCA5Q8WWZ7 1642 aa8.72□□□□□ -1.01
RNA5SP43-201ENST00000516559 AQRO60306 1485 aaKnown RBP eCLIP8.72□□□□□ -1.01
RNA5SP43-201ENST00000516559 TDRD9Q8NDG6 1382 aaKnown RBP8.72□□□□□ -1.01
RNA5SP43-201ENST00000516559 PBRM1Q86U86 1689 aa8.69□□□□□ -1.02
RNA5SP43-201ENST00000516559 GAPVD1Q14C86 1478 aa8.68□□□□□ -1.02
RNA5SP43-201ENST00000516559 GRIN2BQ13224 1484 aa8.67□□□□□ -1.02
RNA5SP43-201ENST00000516559 SNAPC4Q5SXM2 1469 aa8.66□□□□□ -1.02
RNA5SP43-201ENST00000516559 MAGI1Q96QZ7 1491 aaPredicted RBP8.64□□□□□ -1.03
RNA5SP43-201ENST00000516559 CHD1O14646 1710 aa8.64□□□□□ -1.03
RNA5SP43-201ENST00000516559 ADAMTS12P58397 1594 aa8.64□□□□□ -1.03
RNA5SP43-201ENST00000516559 ERICH3Q5RHP9 1530 aa8.63□□□□□ -1.03
RNA5SP43-201ENST00000516559 KIF27Q86VH2 1401 aa8.62□□□□□ -1.03
RNA5SP43-201ENST00000516559 TRIM41Q8WV44 630 aa8.61□□□□□ -1.03
RNA5SP43-201ENST00000516559 SYNJ2O15056 1496 aa8.61□□□□□ -1.03
RNA5SP43-201ENST00000516559 RUSC2Q8N2Y8 1516 aa8.59□□□□□ -1.03
RNA5SP43-201ENST00000516559 CHIC1Q5VXU3 224 aa8.59□□□□□ -1.03
RNA5SP43-201ENST00000516559 FHAD1B1AJZ9 1412 aa8.58□□□□□ -1.04
RNA5SP43-201ENST00000516559 CUL7Q14999 1698 aa8.58□□□□□ -1.04
RNA5SP43-201ENST00000516559 IGF1RP08069 1367 aa8.58□□□□□ -1.04
RNA5SP43-201ENST00000516559 GRIN2AQ12879 1464 aa8.57□□□□□ -1.04
RNA5SP43-201ENST00000516559 DNAJC5Q9H3Z4 198 aa8.56□□□□□ -1.04
RNA5SP43-201ENST00000516559 CLASP1Q7Z460 1538 aa8.55□□□□□ -1.04
RNA5SP43-201ENST00000516559 OSCARQ8IYS5 282 aa8.55□□□□□ -1.04
RNA5SP43-201ENST00000516559 CEP170Q5SW79 1584 aa8.55□□□□□ -1.04
RNA5SP43-201ENST00000516559 NUP160Q12769 1436 aa8.54□□□□□ -1.04
RNA5SP43-201ENST00000516559 FBLN2P98095 1184 aa8.54□□□□□ -1.04
RNA5SP43-201ENST00000516559 CHMP7Q8WUX9 453 aaPredicted RBP8.54□□□□□ -1.04
RNA5SP43-201ENST00000516559 CARMIL1Q5VZK9 1371 aa8.51□□□□□ -1.05
RNA5SP43-201ENST00000516559 PRXQ9BXM0 1461 aa8.51□□□□□ -1.05
RNA5SP43-201ENST00000516559 EEA1Q15075 1411 aa8.5□□□□□ -1.05
RNA5SP43-201ENST00000516559 SHROOM2Q13796 1616 aa8.49□□□□□ -1.05
RNA5SP43-201ENST00000516559 RAPGEF2Q9Y4G8 1499 aa8.48□□□□□ -1.05
RNA5SP43-201ENST00000516559 ARHGEF11O15085 1522 aa8.48□□□□□ -1.05
RNA5SP43-201ENST00000516559 RIMBP3CA6NJZ7 1639 aa8.47□□□□□ -1.05
RNA5SP43-201ENST00000516559 RIMBP3BA6NNM3 1639 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 112.4 ms