RNA–Protein interactions for RNA: ENST00000516290.1

RNU1-6P-201, Transcript of RNA, U1 small nuclear 6, pseudogene, humanhuman

BASIC

Gene RNU1-6P, Length 144 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-6P-201ENST00000516290 NISCHQ9Y2I1 1504 aa11.23□□□□□ -0.61
RNU1-6P-201ENST00000516290 CCDC180Q9P1Z9 1646 aa9.99□□□□□ -0.81
RNU1-6P-201ENST00000516290 ABCC9O60706 1549 aa9.5□□□□□ -0.89
RNU1-6P-201ENST00000516290 ZCCHC6Q5VYS8 1495 aaKnown RBP9.38□□□□□ -0.91
RNU1-6P-201ENST00000516290 MYO15BQ96JP2 1530 aa9.36□□□□□ -0.91
RNU1-6P-201ENST00000516290 DCAF1Q9Y4B6 1507 aa9.36□□□□□ -0.91
RNU1-6P-201ENST00000516290 NACADO15069 1562 aa9.34□□□□□ -0.91
RNU1-6P-201ENST00000516290 RB1CC1Q8TDY2 1594 aa9.32□□□□□ -0.92
RNU1-6P-201ENST00000516290 DCAF8L2P0C7V8 631 aa9.27□□□□□ -0.93
RNU1-6P-201ENST00000516290 UNC13AQ9UPW8 1703 aa9.03□□□□□ -0.96
RNU1-6P-201ENST00000516290 SCRIBQ14160 1630 aa9.03□□□□□ -0.96
RNU1-6P-201ENST00000516290 SHROOM4Q9ULL8 1493 aa9.01□□□□□ -0.97
RNU1-6P-201ENST00000516290 BICRAQ9NZM4 1560 aa8.93□□□□□ -0.98
RNU1-6P-201ENST00000516290 PABPN1Q86U42 306 aaKnown RBP eCLIP8.86□□□□□ -0.99
RNU1-6P-201ENST00000516290 BAZ1AQ9NRL2 1556 aaPredicted RBP8.73□□□□□ -1.01
RNU1-6P-201ENST00000516290 EIF4G1Q04637 1599 aaKnown RBP8.72□□□□□ -1.01
RNU1-6P-201ENST00000516290 SMARCA4P51532 1647 aa8.69□□□□□ -1.02
RNU1-6P-201ENST00000516290 SMARCA2P51531 1590 aa8.65□□□□□ -1.02
RNU1-6P-201ENST00000516290 CECR2Q9BXF3 1484 aa8.64□□□□□ -1.03
RNU1-6P-201ENST00000516290 CC2D2AQ9P2K1 1620 aa8.64□□□□□ -1.03
RNU1-6P-201ENST00000516290 PEG3Q9GZU2 1588 aa8.62□□□□□ -1.03
RNU1-6P-201ENST00000516290 MROH2BQ7Z745 1585 aa8.61□□□□□ -1.03
RNU1-6P-201ENST00000516290 HMGXB3Q12766 1538 aa8.58□□□□□ -1.04
RNU1-6P-201ENST00000516290 NCAPD3P42695 1498 aa8.57□□□□□ -1.04
RNU1-6P-201ENST00000516290 ATAD2BQ9ULI0 1458 aa8.57□□□□□ -1.04
RNU1-6P-201ENST00000516290 RSF1Q96T23 1441 aaPredicted RBP8.57□□□□□ -1.04
RNU1-6P-201ENST00000516290 BAZ1BQ9UIG0 1483 aaKnown RBP8.55□□□□□ -1.04
RNU1-6P-201ENST00000516290 WIZO95785 1651 aa8.53□□□□□ -1.04
RNU1-6P-201ENST00000516290 TOP2AP11388 1531 aaKnown RBP8.5□□□□□ -1.05
RNU1-6P-201ENST00000516290 DNAJC5BQ9UF47 199 aa8.48□□□□□ -1.05
RNU1-6P-201ENST00000516290 SUPT5HO00267 1087 aaKnown RBP8.44□□□□□ -1.06
RNU1-6P-201ENST00000516290 LAMC3Q9Y6N6 1575 aa8.36□□□□□ -1.07
RNU1-6P-201ENST00000516290 CCDC88BA6NC98 1476 aa8.36□□□□□ -1.07
RNU1-6P-201ENST00000516290 PRDM2Q13029 1718 aa8.33□□□□□ -1.08
RNU1-6P-201ENST00000516290 CADPSQ9ULU8 1353 aa8.33□□□□□ -1.08
RNU1-6P-201ENST00000516290 CFTRP13569 1480 aa8.32□□□□□ -1.08
RNU1-6P-201ENST00000516290 PDS5BQ9NTI5 1447 aa8.3□□□□□ -1.08
RNU1-6P-201ENST00000516290 ERCC6Q03468 1493 aa8.26□□□□□ -1.09
RNU1-6P-201ENST00000516290 CEP164Q9UPV0 1460 aa8.24□□□□□ -1.09
RNU1-6P-201ENST00000516290 NESP48681 1621 aa8.23□□□□□ -1.09
RNU1-6P-201ENST00000516290 FANCD2Q9BXW9 1451 aa8.23□□□□□ -1.09
RNU1-6P-201ENST00000516290 ABCC8Q09428 1581 aa8.22□□□□□ -1.09
RNU1-6P-201ENST00000516290 KIF21AQ7Z4S6 1674 aa8.21□□□□□ -1.1
RNU1-6P-201ENST00000516290 MRC2Q9UBG0 1479 aa8.18□□□□□ -1.1
RNU1-6P-201ENST00000516290 DNMBPQ6XZF7 1577 aa8.14□□□□□ -1.11
RNU1-6P-201ENST00000516290 THOC2Q8NI27 1593 aaKnown RBP8.14□□□□□ -1.11
RNU1-6P-201ENST00000516290 WDR62O43379 1518 aa8.14□□□□□ -1.11
RNU1-6P-201ENST00000516290 CUX2O14529 1486 aa8.13□□□□□ -1.11
RNU1-6P-201ENST00000516290 WRNQ14191 1432 aaPredicted RBP eCLIP8.12□□□□□ -1.11
RNU1-6P-201ENST00000516290 TOPBP1Q92547 1522 aa8.11□□□□□ -1.11
RNU1-6P-201ENST00000516290 BIVM-ERCC5R4GMW8 1640 aa8.11□□□□□ -1.11
RNU1-6P-201ENST00000516290 URB2Q14146 1524 aaKnown RBP8.1□□□□□ -1.11
RNU1-6P-201ENST00000516290 TOP2BQ02880 1626 aa8.1□□□□□ -1.11
RNU1-6P-201ENST00000516290 CUX1P39880 1505 aa8.08□□□□□ -1.12
RNU1-6P-201ENST00000516290 WDR97A6NE52 1622 aa8.07□□□□□ -1.12
RNU1-6P-201ENST00000516290 IFT140Q96RY7 1462 aa8.06□□□□□ -1.12
RNU1-6P-201ENST00000516290 SYNJ1O43426 1573 aa8.05□□□□□ -1.12
RNU1-6P-201ENST00000516290 POLA1P09884 1462 aaPredicted RBP8.04□□□□□ -1.12
RNU1-6P-201ENST00000516290 FGD5Q6ZNL6 1462 aa8.04□□□□□ -1.12
RNU1-6P-201ENST00000516290 TRIM41Q8WV44 630 aa8.03□□□□□ -1.12
RNU1-6P-201ENST00000516290 SOGA1O94964 1423 aa8.03□□□□□ -1.12
RNU1-6P-201ENST00000516290 TARBP1Q13395 1621 aaKnown RBP8□□□□□ -1.13
RNU1-6P-201ENST00000516290 ABCA10Q8WWZ4 1543 aa8□□□□□ -1.13
RNU1-6P-201ENST00000516290 EEA1Q15075 1411 aa7.97□□□□□ -1.13
RNU1-6P-201ENST00000516290 KIF27Q86VH2 1401 aa7.97□□□□□ -1.13
RNU1-6P-201ENST00000516290 CHIC1Q5VXU3 224 aa7.97□□□□□ -1.13
RNU1-6P-201ENST00000516290 RAD54L2Q9Y4B4 1467 aa7.96□□□□□ -1.13
RNU1-6P-201ENST00000516290 ABCA5Q8WWZ7 1642 aa7.96□□□□□ -1.14
RNU1-6P-201ENST00000516290 EIF4G3O43432 1585 aaKnown RBP7.95□□□□□ -1.14
RNU1-6P-201ENST00000516290 GRIN2BQ13224 1484 aa7.94□□□□□ -1.14
RNU1-6P-201ENST00000516290 GAPVD1Q14C86 1478 aa7.94□□□□□ -1.14
RNU1-6P-201ENST00000516290 ERICH3Q5RHP9 1530 aa7.93□□□□□ -1.14
RNU1-6P-201ENST00000516290 PBRM1Q86U86 1689 aa7.93□□□□□ -1.14
RNU1-6P-201ENST00000516290 MAGI1Q96QZ7 1491 aaPredicted RBP7.93□□□□□ -1.14
RNU1-6P-201ENST00000516290 CUL7Q14999 1698 aa7.92□□□□□ -1.14
RNU1-6P-201ENST00000516290 ZNF608Q9ULD9 1512 aaPredicted RBP7.92□□□□□ -1.14
RNU1-6P-201ENST00000516290 TDRD9Q8NDG6 1382 aaKnown RBP7.91□□□□□ -1.14
RNU1-6P-201ENST00000516290 AQRO60306 1485 aaKnown RBP eCLIP7.9□□□□□ -1.14
RNU1-6P-201ENST00000516290 FHAD1B1AJZ9 1412 aa7.87□□□□□ -1.15
RNU1-6P-201ENST00000516290 SYNJ2O15056 1496 aa7.87□□□□□ -1.15
RNU1-6P-201ENST00000516290 SNAPC4Q5SXM2 1469 aa7.87□□□□□ -1.15
RNU1-6P-201ENST00000516290 ADAMTS12P58397 1594 aa7.86□□□□□ -1.15
RNU1-6P-201ENST00000516290 DNAJC5Q9H3Z4 198 aa7.86□□□□□ -1.15
RNU1-6P-201ENST00000516290 IGF1RP08069 1367 aa7.85□□□□□ -1.15
RNU1-6P-201ENST00000516290 CHMP7Q8WUX9 453 aaPredicted RBP7.85□□□□□ -1.15
RNU1-6P-201ENST00000516290 CSRNP3Q8WYN3 585 aa7.85□□□□□ -1.15
RNU1-6P-201ENST00000516290 CARMIL1Q5VZK9 1371 aa7.84□□□□□ -1.16
RNU1-6P-201ENST00000516290 RAPGEF2Q9Y4G8 1499 aa7.83□□□□□ -1.16
RNU1-6P-201ENST00000516290 KIF21BO75037 1637 aa7.82□□□□□ -1.16
RNU1-6P-201ENST00000516290 CHD1O14646 1710 aa7.82□□□□□ -1.16
RNU1-6P-201ENST00000516290 GRIN2AQ12879 1464 aa7.81□□□□□ -1.16
RNU1-6P-201ENST00000516290 PRXQ9BXM0 1461 aa7.81□□□□□ -1.16
RNU1-6P-201ENST00000516290 FBLN2P98095 1184 aa7.81□□□□□ -1.16
RNU1-6P-201ENST00000516290 RUSC2Q8N2Y8 1516 aa7.81□□□□□ -1.16
RNU1-6P-201ENST00000516290 OSCARQ8IYS5 282 aa7.79□□□□□ -1.16
RNU1-6P-201ENST00000516290 GOLGA3Q08378 1498 aa7.79□□□□□ -1.16
RNU1-6P-201ENST00000516290 FAM9AQ8IZU1 332 aaPredicted RBP7.78□□□□□ -1.16
RNU1-6P-201ENST00000516290 NUP160Q12769 1436 aa7.78□□□□□ -1.16
RNU1-6P-201ENST00000516290 CTTNBP2Q8WZ74 1663 aa7.77□□□□□ -1.17
RNU1-6P-201ENST00000516290 KIAA0586Q9BVV6 1533 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms