RNA–Protein interactions for RNA: ENST00000516133.1

SCARNA16.1-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 183 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.1-201ENST00000516133 NISCHQ9Y2I1 1504 aa27.25■■□□□ 1.95
SCARNA16.1-201ENST00000516133 CCDC180Q9P1Z9 1646 aa24.21■■□□□ 1.47
SCARNA16.1-201ENST00000516133 ABCC9O60706 1549 aa23.86■■□□□ 1.41
SCARNA16.1-201ENST00000516133 DCAF8L2P0C7V8 631 aa22.93■■□□□ 1.26
SCARNA16.1-201ENST00000516133 RB1CC1Q8TDY2 1594 aa22.9■■□□□ 1.26
SCARNA16.1-201ENST00000516133 NACADO15069 1562 aa22.87■■□□□ 1.25
SCARNA16.1-201ENST00000516133 MYO15BQ96JP2 1530 aa22.7■■□□□ 1.22
SCARNA16.1-201ENST00000516133 ZCCHC6Q5VYS8 1495 aaKnown RBP22.63■■□□□ 1.21
SCARNA16.1-201ENST00000516133 DCAF1Q9Y4B6 1507 aa22.55■■□□□ 1.2
SCARNA16.1-201ENST00000516133 PABPN1Q86U42 306 aaKnown RBP eCLIP22.34■■□□□ 1.17
SCARNA16.1-201ENST00000516133 UNC13AQ9UPW8 1703 aa22.27■■□□□ 1.16
SCARNA16.1-201ENST00000516133 BICRAQ9NZM4 1560 aa22.16■■□□□ 1.14
SCARNA16.1-201ENST00000516133 SCRIBQ14160 1630 aa22.08■■□□□ 1.13
SCARNA16.1-201ENST00000516133 DNAJC5BQ9UF47 199 aa22.06■■□□□ 1.12
SCARNA16.1-201ENST00000516133 SHROOM4Q9ULL8 1493 aa21.98■■□□□ 1.11
SCARNA16.1-201ENST00000516133 EIF4G1Q04637 1599 aaKnown RBP21.61■■□□□ 1.05
SCARNA16.1-201ENST00000516133 CC2D2AQ9P2K1 1620 aa21.55■■□□□ 1.04
SCARNA16.1-201ENST00000516133 CECR2Q9BXF3 1484 aa21.47■■□□□ 1.03
SCARNA16.1-201ENST00000516133 NCAPD3P42695 1498 aa21.13■□□□□ 0.97
SCARNA16.1-201ENST00000516133 SMARCA4P51532 1647 aa21.12■□□□□ 0.97
SCARNA16.1-201ENST00000516133 BAZ1AQ9NRL2 1556 aaPredicted RBP21.12■□□□□ 0.97
SCARNA16.1-201ENST00000516133 ATAD2BQ9ULI0 1458 aa21.09■□□□□ 0.97
SCARNA16.1-201ENST00000516133 SMARCA2P51531 1590 aa21.06■□□□□ 0.96
SCARNA16.1-201ENST00000516133 MROH2BQ7Z745 1585 aa20.97■□□□□ 0.95
SCARNA16.1-201ENST00000516133 HMGXB3Q12766 1538 aa20.95■□□□□ 0.94
SCARNA16.1-201ENST00000516133 PEG3Q9GZU2 1588 aa20.93■□□□□ 0.94
SCARNA16.1-201ENST00000516133 BAZ1BQ9UIG0 1483 aaKnown RBP20.9■□□□□ 0.94
SCARNA16.1-201ENST00000516133 RSF1Q96T23 1441 aaPredicted RBP20.73■□□□□ 0.91
SCARNA16.1-201ENST00000516133 WIZO95785 1651 aa20.7■□□□□ 0.91
SCARNA16.1-201ENST00000516133 ERCC6Q03468 1493 aa20.61■□□□□ 0.89
SCARNA16.1-201ENST00000516133 NESP48681 1621 aa20.59■□□□□ 0.89
SCARNA16.1-201ENST00000516133 LAMC3Q9Y6N6 1575 aa20.55■□□□□ 0.88
SCARNA16.1-201ENST00000516133 CADPSQ9ULU8 1353 aa20.52■□□□□ 0.88
SCARNA16.1-201ENST00000516133 TOP2AP11388 1531 aaKnown RBP20.5■□□□□ 0.87
SCARNA16.1-201ENST00000516133 PDS5BQ9NTI5 1447 aa20.48■□□□□ 0.87
SCARNA16.1-201ENST00000516133 CUX2O14529 1486 aa20.43■□□□□ 0.86
SCARNA16.1-201ENST00000516133 CFTRP13569 1480 aa20.34■□□□□ 0.85
SCARNA16.1-201ENST00000516133 CCDC88BA6NC98 1476 aa20.3■□□□□ 0.84
SCARNA16.1-201ENST00000516133 KIF21AQ7Z4S6 1674 aa20.28■□□□□ 0.84
SCARNA16.1-201ENST00000516133 THOC2Q8NI27 1593 aaKnown RBP20.25■□□□□ 0.83
SCARNA16.1-201ENST00000516133 FANCD2Q9BXW9 1451 aa20.24■□□□□ 0.83
SCARNA16.1-201ENST00000516133 CEP164Q9UPV0 1460 aa20.22■□□□□ 0.83
SCARNA16.1-201ENST00000516133 MRC2Q9UBG0 1479 aa20.21■□□□□ 0.83
SCARNA16.1-201ENST00000516133 SUPT5HO00267 1087 aaKnown RBP20.17■□□□□ 0.82
SCARNA16.1-201ENST00000516133 WDR62O43379 1518 aa20.12■□□□□ 0.81
SCARNA16.1-201ENST00000516133 PRDM2Q13029 1718 aa20.05■□□□□ 0.8
SCARNA16.1-201ENST00000516133 DNAJC5Q9H3Z4 198 aa20.02■□□□□ 0.8
SCARNA16.1-201ENST00000516133 URB2Q14146 1524 aaKnown RBP20.02■□□□□ 0.79
SCARNA16.1-201ENST00000516133 ABCC8Q09428 1581 aa19.95■□□□□ 0.78
SCARNA16.1-201ENST00000516133 TOPBP1Q92547 1522 aa19.88■□□□□ 0.77
SCARNA16.1-201ENST00000516133 DNMBPQ6XZF7 1577 aa19.83■□□□□ 0.77
SCARNA16.1-201ENST00000516133 IFT140Q96RY7 1462 aa19.82■□□□□ 0.76
SCARNA16.1-201ENST00000516133 POLA1P09884 1462 aaPredicted RBP19.71■□□□□ 0.75
SCARNA16.1-201ENST00000516133 ZNF608Q9ULD9 1512 aaPredicted RBP19.71■□□□□ 0.75
SCARNA16.1-201ENST00000516133 SOGA1O94964 1423 aa19.69■□□□□ 0.74
SCARNA16.1-201ENST00000516133 CUX1P39880 1505 aa19.67■□□□□ 0.74
SCARNA16.1-201ENST00000516133 OSCARQ8IYS5 282 aa19.66■□□□□ 0.74
SCARNA16.1-201ENST00000516133 TARBP1Q13395 1621 aaKnown RBP19.65■□□□□ 0.74
SCARNA16.1-201ENST00000516133 FGD5Q6ZNL6 1462 aa19.64■□□□□ 0.73
SCARNA16.1-201ENST00000516133 RAD54L2Q9Y4B4 1467 aa19.63■□□□□ 0.73
SCARNA16.1-201ENST00000516133 AQRO60306 1485 aaKnown RBP eCLIP19.61■□□□□ 0.73
SCARNA16.1-201ENST00000516133 TDRD9Q8NDG6 1382 aaKnown RBP19.58■□□□□ 0.73
SCARNA16.1-201ENST00000516133 EIF4G3O43432 1585 aaKnown RBP19.57■□□□□ 0.72
SCARNA16.1-201ENST00000516133 WRNQ14191 1432 aaPredicted RBP eCLIP19.56■□□□□ 0.72
SCARNA16.1-201ENST00000516133 WDR97A6NE52 1622 aa19.51■□□□□ 0.71
SCARNA16.1-201ENST00000516133 TOP2BQ02880 1626 aa19.48■□□□□ 0.71
SCARNA16.1-201ENST00000516133 FBLN2P98095 1184 aa19.47■□□□□ 0.71
SCARNA16.1-201ENST00000516133 ABCA10Q8WWZ4 1543 aa19.46■□□□□ 0.71
SCARNA16.1-201ENST00000516133 GRIN2BQ13224 1484 aa19.45■□□□□ 0.7
SCARNA16.1-201ENST00000516133 BIVM-ERCC5R4GMW8 1640 aa19.44■□□□□ 0.7
SCARNA16.1-201ENST00000516133 SYNJ1O43426 1573 aa19.44■□□□□ 0.7
SCARNA16.1-201ENST00000516133 GAPVD1Q14C86 1478 aa19.43■□□□□ 0.7
SCARNA16.1-201ENST00000516133 CHMP7Q8WUX9 453 aaPredicted RBP19.41■□□□□ 0.7
SCARNA16.1-201ENST00000516133 MAGI1Q96QZ7 1491 aaPredicted RBP19.4■□□□□ 0.7
SCARNA16.1-201ENST00000516133 SNAPC4Q5SXM2 1469 aa19.39■□□□□ 0.69
SCARNA16.1-201ENST00000516133 ABCA5Q8WWZ7 1642 aa19.33■□□□□ 0.69
SCARNA16.1-201ENST00000516133 CHD1O14646 1710 aa19.33■□□□□ 0.68
SCARNA16.1-201ENST00000516133 SYNJ2O15056 1496 aa19.33■□□□□ 0.68
SCARNA16.1-201ENST00000516133 PBRM1Q86U86 1689 aa19.28■□□□□ 0.68
SCARNA16.1-201ENST00000516133 TRIM41Q8WV44 630 aa19.27■□□□□ 0.68
SCARNA16.1-201ENST00000516133 ERICH3Q5RHP9 1530 aa19.23■□□□□ 0.67
SCARNA16.1-201ENST00000516133 ARHGEF11O15085 1522 aa19.21■□□□□ 0.67
SCARNA16.1-201ENST00000516133 FHAD1B1AJZ9 1412 aa19.21■□□□□ 0.67
SCARNA16.1-201ENST00000516133 RIMBP3CA6NJZ7 1639 aa19.19■□□□□ 0.66
SCARNA16.1-201ENST00000516133 RIMBP3BA6NNM3 1639 aa19.19■□□□□ 0.66
SCARNA16.1-201ENST00000516133 RIMBP3Q9UFD9 1639 aa19.19■□□□□ 0.66
SCARNA16.1-201ENST00000516133 KIF27Q86VH2 1401 aa19.18■□□□□ 0.66
SCARNA16.1-201ENST00000516133 GRIN2AQ12879 1464 aa19.17■□□□□ 0.66
SCARNA16.1-201ENST00000516133 CLASP1Q7Z460 1538 aa19.16■□□□□ 0.66
SCARNA16.1-201ENST00000516133 ADAMTS12P58397 1594 aa19.15■□□□□ 0.66
SCARNA16.1-201ENST00000516133 CYB5RLQ6IPT4 315 aa19.15■□□□□ 0.66
SCARNA16.1-201ENST00000516133 IGF1RP08069 1367 aa19.13■□□□□ 0.65
SCARNA16.1-201ENST00000516133 NUP160Q12769 1436 aa19.1■□□□□ 0.65
SCARNA16.1-201ENST00000516133 ARAP1Q96P48 1450 aa19.03■□□□□ 0.64
SCARNA16.1-201ENST00000516133 CEP170Q5SW79 1584 aa19.03■□□□□ 0.64
SCARNA16.1-201ENST00000516133 CARMIL1Q5VZK9 1371 aa19.01■□□□□ 0.63
SCARNA16.1-201ENST00000516133 CUL7Q14999 1698 aa18.99■□□□□ 0.63
SCARNA16.1-201ENST00000516133 JPH4Q96JJ6 628 aa18.99■□□□□ 0.63
SCARNA16.1-201ENST00000516133 KIAA0586Q9BVV6 1533 aa18.92■□□□□ 0.62
SCARNA16.1-201ENST00000516133 SHROOM2Q13796 1616 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 99.8 ms