RNA–Protein interactions for RNA: ENST00000516009.1

SCARNA20.1-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 138 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.1-201ENST00000516009 NISCHQ9Y2I1 1504 aa17.43■□□□□ 0.38
SCARNA20.1-201ENST00000516009 CCDC180Q9P1Z9 1646 aa15.29■□□□□ 0.04
SCARNA20.1-201ENST00000516009 ZCCHC6Q5VYS8 1495 aaKnown RBP14.63□□□□□ -0.07
SCARNA20.1-201ENST00000516009 ABCC9O60706 1549 aa14.44□□□□□ -0.1
SCARNA20.1-201ENST00000516009 DCAF1Q9Y4B6 1507 aa14.43□□□□□ -0.1
SCARNA20.1-201ENST00000516009 DCAF8L2P0C7V8 631 aa14.38□□□□□ -0.11
SCARNA20.1-201ENST00000516009 MYO15BQ96JP2 1530 aa14.27□□□□□ -0.12
SCARNA20.1-201ENST00000516009 NACADO15069 1562 aa14.22□□□□□ -0.13
SCARNA20.1-201ENST00000516009 SHROOM4Q9ULL8 1493 aa14.14□□□□□ -0.15
SCARNA20.1-201ENST00000516009 RB1CC1Q8TDY2 1594 aa14.12□□□□□ -0.15
SCARNA20.1-201ENST00000516009 SCRIBQ14160 1630 aa14.01□□□□□ -0.17
SCARNA20.1-201ENST00000516009 UNC13AQ9UPW8 1703 aa13.87□□□□□ -0.19
SCARNA20.1-201ENST00000516009 BICRAQ9NZM4 1560 aa13.66□□□□□ -0.22
SCARNA20.1-201ENST00000516009 SUPT5HO00267 1087 aaKnown RBP13.58□□□□□ -0.24
SCARNA20.1-201ENST00000516009 PABPN1Q86U42 306 aaKnown RBP eCLIP13.56□□□□□ -0.24
SCARNA20.1-201ENST00000516009 CECR2Q9BXF3 1484 aa13.52□□□□□ -0.25
SCARNA20.1-201ENST00000516009 BAZ1AQ9NRL2 1556 aaPredicted RBP13.49□□□□□ -0.25
SCARNA20.1-201ENST00000516009 RSF1Q96T23 1441 aaPredicted RBP13.47□□□□□ -0.25
SCARNA20.1-201ENST00000516009 MROH2BQ7Z745 1585 aa13.45□□□□□ -0.26
SCARNA20.1-201ENST00000516009 SMARCA4P51532 1647 aa13.43□□□□□ -0.26
SCARNA20.1-201ENST00000516009 WIZO95785 1651 aa13.37□□□□□ -0.27
SCARNA20.1-201ENST00000516009 EIF4G1Q04637 1599 aaKnown RBP13.27□□□□□ -0.29
SCARNA20.1-201ENST00000516009 PEG3Q9GZU2 1588 aa13.27□□□□□ -0.29
SCARNA20.1-201ENST00000516009 TOP2AP11388 1531 aaKnown RBP13.23□□□□□ -0.29
SCARNA20.1-201ENST00000516009 SMARCA2P51531 1590 aa13.22□□□□□ -0.29
SCARNA20.1-201ENST00000516009 ATAD2BQ9ULI0 1458 aa13.19□□□□□ -0.3
SCARNA20.1-201ENST00000516009 BAZ1BQ9UIG0 1483 aaKnown RBP13.14□□□□□ -0.31
SCARNA20.1-201ENST00000516009 HMGXB3Q12766 1538 aa13.1□□□□□ -0.31
SCARNA20.1-201ENST00000516009 NCAPD3P42695 1498 aa13.1□□□□□ -0.31
SCARNA20.1-201ENST00000516009 CC2D2AQ9P2K1 1620 aa13.09□□□□□ -0.31
SCARNA20.1-201ENST00000516009 CCDC88BA6NC98 1476 aa13.06□□□□□ -0.32
SCARNA20.1-201ENST00000516009 CHIC1Q5VXU3 224 aa12.97□□□□□ -0.33
SCARNA20.1-201ENST00000516009 PRDM2Q13029 1718 aa12.82□□□□□ -0.36
SCARNA20.1-201ENST00000516009 TRIM41Q8WV44 630 aa12.8□□□□□ -0.36
SCARNA20.1-201ENST00000516009 CFTRP13569 1480 aa12.78□□□□□ -0.36
SCARNA20.1-201ENST00000516009 ABCC8Q09428 1581 aa12.78□□□□□ -0.36
SCARNA20.1-201ENST00000516009 CADPSQ9ULU8 1353 aa12.75□□□□□ -0.37
SCARNA20.1-201ENST00000516009 DNAJC5BQ9UF47 199 aa12.72□□□□□ -0.37
SCARNA20.1-201ENST00000516009 WRNQ14191 1432 aaPredicted RBP eCLIP12.71□□□□□ -0.38
SCARNA20.1-201ENST00000516009 LAMC3Q9Y6N6 1575 aa12.7□□□□□ -0.38
SCARNA20.1-201ENST00000516009 SYNJ1O43426 1573 aa12.66□□□□□ -0.38
SCARNA20.1-201ENST00000516009 NESP48681 1621 aa12.65□□□□□ -0.38
SCARNA20.1-201ENST00000516009 BIVM-ERCC5R4GMW8 1640 aa12.64□□□□□ -0.39
SCARNA20.1-201ENST00000516009 TOP2BQ02880 1626 aa12.63□□□□□ -0.39
SCARNA20.1-201ENST00000516009 FANCD2Q9BXW9 1451 aa12.62□□□□□ -0.39
SCARNA20.1-201ENST00000516009 CUX1P39880 1505 aa12.59□□□□□ -0.39
SCARNA20.1-201ENST00000516009 PDS5BQ9NTI5 1447 aa12.57□□□□□ -0.4
SCARNA20.1-201ENST00000516009 CEP164Q9UPV0 1460 aa12.56□□□□□ -0.4
SCARNA20.1-201ENST00000516009 KIF21AQ7Z4S6 1674 aa12.56□□□□□ -0.4
SCARNA20.1-201ENST00000516009 FAM9AQ8IZU1 332 aaPredicted RBP12.54□□□□□ -0.4
SCARNA20.1-201ENST00000516009 DNMBPQ6XZF7 1577 aa12.52□□□□□ -0.4
SCARNA20.1-201ENST00000516009 EEA1Q15075 1411 aa12.52□□□□□ -0.41
SCARNA20.1-201ENST00000516009 SOGA1O94964 1423 aa12.51□□□□□ -0.41
SCARNA20.1-201ENST00000516009 TOPBP1Q92547 1522 aa12.48□□□□□ -0.41
SCARNA20.1-201ENST00000516009 RUSC2Q8N2Y8 1516 aa12.47□□□□□ -0.41
SCARNA20.1-201ENST00000516009 FGD5Q6ZNL6 1462 aa12.46□□□□□ -0.41
SCARNA20.1-201ENST00000516009 URB2Q14146 1524 aaKnown RBP12.46□□□□□ -0.42
SCARNA20.1-201ENST00000516009 LOC105371045A0A1W2PR82 267 aa12.45□□□□□ -0.42
SCARNA20.1-201ENST00000516009 MRC2Q9UBG0 1479 aa12.42□□□□□ -0.42
SCARNA20.1-201ENST00000516009 CSRNP3Q8WYN3 585 aa12.42□□□□□ -0.42
SCARNA20.1-201ENST00000516009 POLA1P09884 1462 aaPredicted RBP12.4□□□□□ -0.42
SCARNA20.1-201ENST00000516009 ERCC6Q03468 1493 aa12.4□□□□□ -0.42
SCARNA20.1-201ENST00000516009 KIF27Q86VH2 1401 aa12.4□□□□□ -0.42
SCARNA20.1-201ENST00000516009 KIF21BO75037 1637 aa12.37□□□□□ -0.43
SCARNA20.1-201ENST00000516009 CUX2O14529 1486 aa12.37□□□□□ -0.43
SCARNA20.1-201ENST00000516009 WDR97A6NE52 1622 aa12.37□□□□□ -0.43
SCARNA20.1-201ENST00000516009 WDR62O43379 1518 aa12.36□□□□□ -0.43
SCARNA20.1-201ENST00000516009 RAD54L2Q9Y4B4 1467 aa12.35□□□□□ -0.43
SCARNA20.1-201ENST00000516009 EHMT2Q96KQ7 1210 aa12.35□□□□□ -0.43
SCARNA20.1-201ENST00000516009 ABCA10Q8WWZ4 1543 aa12.35□□□□□ -0.43
SCARNA20.1-201ENST00000516009 THOC2Q8NI27 1593 aaKnown RBP12.35□□□□□ -0.43
SCARNA20.1-201ENST00000516009 GOLGA3Q08378 1498 aa12.34□□□□□ -0.43
SCARNA20.1-201ENST00000516009 TARBP1Q13395 1621 aaKnown RBP12.31□□□□□ -0.44
SCARNA20.1-201ENST00000516009 ERICH3Q5RHP9 1530 aa12.29□□□□□ -0.44
SCARNA20.1-201ENST00000516009 PRXQ9BXM0 1461 aa12.28□□□□□ -0.44
SCARNA20.1-201ENST00000516009 ABCA5Q8WWZ7 1642 aa12.28□□□□□ -0.44
SCARNA20.1-201ENST00000516009 TNIKQ9UKE5 1360 aa12.27□□□□□ -0.45
SCARNA20.1-201ENST00000516009 RAPGEF2Q9Y4G8 1499 aa12.27□□□□□ -0.45
SCARNA20.1-201ENST00000516009 UBTFP17480 764 aaKnown RBP12.26□□□□□ -0.45
SCARNA20.1-201ENST00000516009 IGF1RP08069 1367 aa12.26□□□□□ -0.45
SCARNA20.1-201ENST00000516009 IFT140Q96RY7 1462 aa12.26□□□□□ -0.45
SCARNA20.1-201ENST00000516009 CUL7Q14999 1698 aa12.25□□□□□ -0.45
SCARNA20.1-201ENST00000516009 GAPVD1Q14C86 1478 aa12.24□□□□□ -0.45
SCARNA20.1-201ENST00000516009 PBRM1Q86U86 1689 aa12.23□□□□□ -0.45
SCARNA20.1-201ENST00000516009 TDRD9Q8NDG6 1382 aaKnown RBP12.23□□□□□ -0.45
SCARNA20.1-201ENST00000516009 CARMIL1Q5VZK9 1371 aa12.21□□□□□ -0.45
SCARNA20.1-201ENST00000516009 CEP162Q5TB80 1403 aa12.2□□□□□ -0.46
SCARNA20.1-201ENST00000516009 EIF4G3O43432 1585 aaKnown RBP12.17□□□□□ -0.46
SCARNA20.1-201ENST00000516009 ZNF608Q9ULD9 1512 aaPredicted RBP12.16□□□□□ -0.46
SCARNA20.1-201ENST00000516009 AQRO60306 1485 aaKnown RBP eCLIP12.16□□□□□ -0.46
SCARNA20.1-201ENST00000516009 GRIN2BQ13224 1484 aa12.15□□□□□ -0.46
SCARNA20.1-201ENST00000516009 ADAMTS12P58397 1594 aa12.13□□□□□ -0.47
SCARNA20.1-201ENST00000516009 CTTNBP2Q8WZ74 1663 aa12.13□□□□□ -0.47
SCARNA20.1-201ENST00000516009 CLIP1P30622 1438 aa12.12□□□□□ -0.47
SCARNA20.1-201ENST00000516009 FHAD1B1AJZ9 1412 aa12.1□□□□□ -0.47
SCARNA20.1-201ENST00000516009 SNAPC4Q5SXM2 1469 aa12.08□□□□□ -0.48
SCARNA20.1-201ENST00000516009 MAGI1Q96QZ7 1491 aaPredicted RBP12.07□□□□□ -0.48
SCARNA20.1-201ENST00000516009 RANGAP1P46060 587 aaPredicted RBP12.05□□□□□ -0.48
SCARNA20.1-201ENST00000516009 SYNJ2O15056 1496 aa12.02□□□□□ -0.49
SCARNA20.1-201ENST00000516009 ARHGAP35Q9NRY4 1499 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 124.4 ms