RNA–Protein interactions for RNA: ENST00000515982.1

SCARNA6-201, small Cajal body-specific RNA 6, humanhuman

BASIC

Gene SCARNA6, Length 265 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleolus, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA6-201ENST00000515982 NISCHQ9Y2I1 1504 aa16.57■□□□□ 0.24
SCARNA6-201ENST00000515982 CCDC180Q9P1Z9 1646 aa14.61□□□□□ -0.07
SCARNA6-201ENST00000515982 ABCC9O60706 1549 aa14.51□□□□□ -0.09
SCARNA6-201ENST00000515982 DNAJC5BQ9UF47 199 aa14.04□□□□□ -0.16
SCARNA6-201ENST00000515982 DCAF8L2P0C7V8 631 aa13.83□□□□□ -0.2
SCARNA6-201ENST00000515982 ZCCHC6Q5VYS8 1495 aaKnown RBP13.82□□□□□ -0.2
SCARNA6-201ENST00000515982 DCAF1Q9Y4B6 1507 aa13.74□□□□□ -0.21
SCARNA6-201ENST00000515982 NACADO15069 1562 aa13.72□□□□□ -0.21
SCARNA6-201ENST00000515982 MYO15BQ96JP2 1530 aa13.71□□□□□ -0.21
SCARNA6-201ENST00000515982 RB1CC1Q8TDY2 1594 aa13.66□□□□□ -0.22
SCARNA6-201ENST00000515982 PABPN1Q86U42 306 aaKnown RBP eCLIP13.49□□□□□ -0.25
SCARNA6-201ENST00000515982 SCRIBQ14160 1630 aa13.32□□□□□ -0.28
SCARNA6-201ENST00000515982 UNC13AQ9UPW8 1703 aa13.29□□□□□ -0.28
SCARNA6-201ENST00000515982 BICRAQ9NZM4 1560 aa13.25□□□□□ -0.29
SCARNA6-201ENST00000515982 SHROOM4Q9ULL8 1493 aa13.23□□□□□ -0.29
SCARNA6-201ENST00000515982 DNAJC5Q9H3Z4 198 aa13.14□□□□□ -0.31
SCARNA6-201ENST00000515982 CECR2Q9BXF3 1484 aa13.1□□□□□ -0.31
SCARNA6-201ENST00000515982 CC2D2AQ9P2K1 1620 aa13.06□□□□□ -0.32
SCARNA6-201ENST00000515982 EIF4G1Q04637 1599 aaKnown RBP12.94□□□□□ -0.34
SCARNA6-201ENST00000515982 BAZ1AQ9NRL2 1556 aaPredicted RBP12.83□□□□□ -0.36
SCARNA6-201ENST00000515982 SMARCA4P51532 1647 aa12.78□□□□□ -0.36
SCARNA6-201ENST00000515982 MROH2BQ7Z745 1585 aa12.75□□□□□ -0.37
SCARNA6-201ENST00000515982 RSF1Q96T23 1441 aaPredicted RBP12.71□□□□□ -0.37
SCARNA6-201ENST00000515982 SMARCA2P51531 1590 aa12.69□□□□□ -0.38
SCARNA6-201ENST00000515982 ATAD2BQ9ULI0 1458 aa12.68□□□□□ -0.38
SCARNA6-201ENST00000515982 PEG3Q9GZU2 1588 aa12.66□□□□□ -0.38
SCARNA6-201ENST00000515982 NCAPD3P42695 1498 aa12.65□□□□□ -0.38
SCARNA6-201ENST00000515982 CUX2O14529 1486 aa12.63□□□□□ -0.39
SCARNA6-201ENST00000515982 WIZO95785 1651 aa12.62□□□□□ -0.39
SCARNA6-201ENST00000515982 SUPT5HO00267 1087 aaKnown RBP12.62□□□□□ -0.39
SCARNA6-201ENST00000515982 BAZ1BQ9UIG0 1483 aaKnown RBP12.59□□□□□ -0.39
SCARNA6-201ENST00000515982 HMGXB3Q12766 1538 aa12.58□□□□□ -0.4
SCARNA6-201ENST00000515982 ERCC6Q03468 1493 aa12.53□□□□□ -0.4
SCARNA6-201ENST00000515982 TOP2AP11388 1531 aaKnown RBP12.52□□□□□ -0.41
SCARNA6-201ENST00000515982 CCDC88BA6NC98 1476 aa12.39□□□□□ -0.43
SCARNA6-201ENST00000515982 TRIM41Q8WV44 630 aa12.38□□□□□ -0.43
SCARNA6-201ENST00000515982 NESP48681 1621 aa12.37□□□□□ -0.43
SCARNA6-201ENST00000515982 CADPSQ9ULU8 1353 aa12.31□□□□□ -0.44
SCARNA6-201ENST00000515982 LAMC3Q9Y6N6 1575 aa12.27□□□□□ -0.44
SCARNA6-201ENST00000515982 CFTRP13569 1480 aa12.27□□□□□ -0.45
SCARNA6-201ENST00000515982 THOC2Q8NI27 1593 aaKnown RBP12.26□□□□□ -0.45
SCARNA6-201ENST00000515982 PDS5BQ9NTI5 1447 aa12.22□□□□□ -0.45
SCARNA6-201ENST00000515982 PRDM2Q13029 1718 aa12.15□□□□□ -0.46
SCARNA6-201ENST00000515982 FANCD2Q9BXW9 1451 aa12.14□□□□□ -0.47
SCARNA6-201ENST00000515982 KIF21AQ7Z4S6 1674 aa12.13□□□□□ -0.47
SCARNA6-201ENST00000515982 CEP164Q9UPV0 1460 aa12.11□□□□□ -0.47
SCARNA6-201ENST00000515982 OSCARQ8IYS5 282 aa12.05□□□□□ -0.48
SCARNA6-201ENST00000515982 ABCC8Q09428 1581 aa12.05□□□□□ -0.48
SCARNA6-201ENST00000515982 MRC2Q9UBG0 1479 aa12.04□□□□□ -0.48
SCARNA6-201ENST00000515982 WDR62O43379 1518 aa12.01□□□□□ -0.49
SCARNA6-201ENST00000515982 WRNQ14191 1432 aaPredicted RBP eCLIP12□□□□□ -0.49
SCARNA6-201ENST00000515982 URB2Q14146 1524 aaKnown RBP11.98□□□□□ -0.49
SCARNA6-201ENST00000515982 DNMBPQ6XZF7 1577 aa11.97□□□□□ -0.49
SCARNA6-201ENST00000515982 TOPBP1Q92547 1522 aa11.96□□□□□ -0.49
SCARNA6-201ENST00000515982 CUX1P39880 1505 aa11.95□□□□□ -0.5
SCARNA6-201ENST00000515982 TOP2BQ02880 1626 aa11.92□□□□□ -0.5
SCARNA6-201ENST00000515982 CHIC1Q5VXU3 224 aa11.91□□□□□ -0.5
SCARNA6-201ENST00000515982 BIVM-ERCC5R4GMW8 1640 aa11.9□□□□□ -0.5
SCARNA6-201ENST00000515982 SYNJ1O43426 1573 aa11.9□□□□□ -0.5
SCARNA6-201ENST00000515982 FGD5Q6ZNL6 1462 aa11.89□□□□□ -0.51
SCARNA6-201ENST00000515982 SOGA1O94964 1423 aa11.88□□□□□ -0.51
SCARNA6-201ENST00000515982 RIMBP3CA6NJZ7 1639 aa11.88□□□□□ -0.51
SCARNA6-201ENST00000515982 RIMBP3BA6NNM3 1639 aa11.88□□□□□ -0.51
SCARNA6-201ENST00000515982 RIMBP3Q9UFD9 1639 aa11.88□□□□□ -0.51
SCARNA6-201ENST00000515982 POLA1P09884 1462 aaPredicted RBP11.88□□□□□ -0.51
SCARNA6-201ENST00000515982 IFT140Q96RY7 1462 aa11.86□□□□□ -0.51
SCARNA6-201ENST00000515982 RAD54L2Q9Y4B4 1467 aa11.82□□□□□ -0.52
SCARNA6-201ENST00000515982 ARHGEF11O15085 1522 aa11.81□□□□□ -0.52
SCARNA6-201ENST00000515982 CYB5RLQ6IPT4 315 aa11.81□□□□□ -0.52
SCARNA6-201ENST00000515982 TARBP1Q13395 1621 aaKnown RBP11.8□□□□□ -0.52
SCARNA6-201ENST00000515982 ABCA10Q8WWZ4 1543 aa11.8□□□□□ -0.52
SCARNA6-201ENST00000515982 TRHP20396 242 aaPredicted RBP11.77□□□□□ -0.53
SCARNA6-201ENST00000515982 TDRD9Q8NDG6 1382 aaKnown RBP11.76□□□□□ -0.53
SCARNA6-201ENST00000515982 KIF27Q86VH2 1401 aa11.76□□□□□ -0.53
SCARNA6-201ENST00000515982 ZNF608Q9ULD9 1512 aaPredicted RBP11.76□□□□□ -0.53
SCARNA6-201ENST00000515982 WDR97A6NE52 1622 aa11.75□□□□□ -0.53
SCARNA6-201ENST00000515982 AQRO60306 1485 aaKnown RBP eCLIP11.73□□□□□ -0.53
SCARNA6-201ENST00000515982 GAPVD1Q14C86 1478 aa11.73□□□□□ -0.53
SCARNA6-201ENST00000515982 EEA1Q15075 1411 aa11.7□□□□□ -0.54
SCARNA6-201ENST00000515982 AEBP2Q6ZN18 517 aaPredicted RBP11.7□□□□□ -0.54
SCARNA6-201ENST00000515982 GRIN2BQ13224 1484 aa11.7□□□□□ -0.54
SCARNA6-201ENST00000515982 ABCA5Q8WWZ7 1642 aa11.69□□□□□ -0.54
SCARNA6-201ENST00000515982 EIF4G3O43432 1585 aaKnown RBP11.68□□□□□ -0.54
SCARNA6-201ENST00000515982 ARAP1Q96P48 1450 aa11.68□□□□□ -0.54
SCARNA6-201ENST00000515982 CSRNP3Q8WYN3 585 aa11.67□□□□□ -0.54
SCARNA6-201ENST00000515982 IGF1RP08069 1367 aa11.67□□□□□ -0.54
SCARNA6-201ENST00000515982 ERICH3Q5RHP9 1530 aa11.66□□□□□ -0.54
SCARNA6-201ENST00000515982 RUSC2Q8N2Y8 1516 aa11.66□□□□□ -0.54
SCARNA6-201ENST00000515982 FAM9AQ8IZU1 332 aaPredicted RBP11.65□□□□□ -0.54
SCARNA6-201ENST00000515982 PBRM1Q86U86 1689 aa11.64□□□□□ -0.55
SCARNA6-201ENST00000515982 MAGI1Q96QZ7 1491 aaPredicted RBP11.63□□□□□ -0.55
SCARNA6-201ENST00000515982 CHMP7Q8WUX9 453 aaPredicted RBP11.62□□□□□ -0.55
SCARNA6-201ENST00000515982 CARMIL1Q5VZK9 1371 aa11.62□□□□□ -0.55
SCARNA6-201ENST00000515982 SNAPC4Q5SXM2 1469 aa11.62□□□□□ -0.55
SCARNA6-201ENST00000515982 FHAD1B1AJZ9 1412 aa11.61□□□□□ -0.55
SCARNA6-201ENST00000515982 FBLN2P98095 1184 aa11.61□□□□□ -0.55
SCARNA6-201ENST00000515982 CUL7Q14999 1698 aa11.59□□□□□ -0.55
SCARNA6-201ENST00000515982 CHD1O14646 1710 aa11.59□□□□□ -0.55
SCARNA6-201ENST00000515982 SYNJ2O15056 1496 aa11.58□□□□□ -0.56
SCARNA6-201ENST00000515982 ADAMTS12P58397 1594 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms