RNA–Protein interactions for RNA: ENST00000515809.1

RBM47-215, Transcript of RNA binding motif protein 47, humanhuman

TSL 2

Gene RBM47, Length 229 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM47-215ENST00000515809 NISCHQ9Y2I1 1504 aa33.81■■■■□ 3
RBM47-215ENST00000515809 CCDC180Q9P1Z9 1646 aa30.07■■■□□ 2.4
RBM47-215ENST00000515809 ABCC9O60706 1549 aa28.84■■■□□ 2.21
RBM47-215ENST00000515809 ZCCHC6Q5VYS8 1495 aaKnown RBP28.28■■■□□ 2.12
RBM47-215ENST00000515809 NACADO15069 1562 aa28.07■■■□□ 2.08
RBM47-215ENST00000515809 RB1CC1Q8TDY2 1594 aa28.04■■■□□ 2.08
RBM47-215ENST00000515809 DCAF1Q9Y4B6 1507 aa28.04■■■□□ 2.08
RBM47-215ENST00000515809 MYO15BQ96JP2 1530 aa28.02■■■□□ 2.08
RBM47-215ENST00000515809 DCAF8L2P0C7V8 631 aa27.95■■■□□ 2.06
RBM47-215ENST00000515809 UNC13AQ9UPW8 1703 aa27.47■■□□□ 1.99
RBM47-215ENST00000515809 SCRIBQ14160 1630 aa27.38■■□□□ 1.97
RBM47-215ENST00000515809 BICRAQ9NZM4 1560 aa27.09■■□□□ 1.93
RBM47-215ENST00000515809 SHROOM4Q9ULL8 1493 aa26.96■■□□□ 1.91
RBM47-215ENST00000515809 PABPN1Q86U42 306 aaKnown RBP eCLIP26.89■■□□□ 1.9
RBM47-215ENST00000515809 EIF4G1Q04637 1599 aaKnown RBP26.38■■□□□ 1.81
RBM47-215ENST00000515809 BAZ1AQ9NRL2 1556 aaPredicted RBP26.25■■□□□ 1.79
RBM47-215ENST00000515809 SMARCA4P51532 1647 aa26.23■■□□□ 1.79
RBM47-215ENST00000515809 CECR2Q9BXF3 1484 aa26.22■■□□□ 1.79
RBM47-215ENST00000515809 CC2D2AQ9P2K1 1620 aa26.18■■□□□ 1.78
RBM47-215ENST00000515809 MROH2BQ7Z745 1585 aa26.03■■□□□ 1.76
RBM47-215ENST00000515809 SMARCA2P51531 1590 aa25.98■■□□□ 1.75
RBM47-215ENST00000515809 PEG3Q9GZU2 1588 aa25.95■■□□□ 1.75
RBM47-215ENST00000515809 DNAJC5BQ9UF47 199 aa25.91■■□□□ 1.74
RBM47-215ENST00000515809 ATAD2BQ9ULI0 1458 aa25.88■■□□□ 1.73
RBM47-215ENST00000515809 WIZO95785 1651 aa25.84■■□□□ 1.73
RBM47-215ENST00000515809 HMGXB3Q12766 1538 aa25.83■■□□□ 1.73
RBM47-215ENST00000515809 RSF1Q96T23 1441 aaPredicted RBP25.83■■□□□ 1.73
RBM47-215ENST00000515809 NCAPD3P42695 1498 aa25.8■■□□□ 1.72
RBM47-215ENST00000515809 BAZ1BQ9UIG0 1483 aaKnown RBP25.76■■□□□ 1.71
RBM47-215ENST00000515809 TOP2AP11388 1531 aaKnown RBP25.62■■□□□ 1.69
RBM47-215ENST00000515809 SUPT5HO00267 1087 aaKnown RBP25.42■■□□□ 1.66
RBM47-215ENST00000515809 CCDC88BA6NC98 1476 aa25.21■■□□□ 1.63
RBM47-215ENST00000515809 LAMC3Q9Y6N6 1575 aa25.18■■□□□ 1.62
RBM47-215ENST00000515809 PRDM2Q13029 1718 aa25.14■■□□□ 1.61
RBM47-215ENST00000515809 CADPSQ9ULU8 1353 aa25.05■■□□□ 1.6
RBM47-215ENST00000515809 NESP48681 1621 aa25.05■■□□□ 1.6
RBM47-215ENST00000515809 CFTRP13569 1480 aa25.02■■□□□ 1.6
RBM47-215ENST00000515809 KIF21AQ7Z4S6 1674 aa24.93■■□□□ 1.58
RBM47-215ENST00000515809 PDS5BQ9NTI5 1447 aa24.92■■□□□ 1.58
RBM47-215ENST00000515809 ERCC6Q03468 1493 aa24.9■■□□□ 1.58
RBM47-215ENST00000515809 FANCD2Q9BXW9 1451 aa24.82■■□□□ 1.56
RBM47-215ENST00000515809 CEP164Q9UPV0 1460 aa24.81■■□□□ 1.56
RBM47-215ENST00000515809 THOC2Q8NI27 1593 aaKnown RBP24.72■■□□□ 1.55
RBM47-215ENST00000515809 MRC2Q9UBG0 1479 aa24.67■■□□□ 1.54
RBM47-215ENST00000515809 WDR62O43379 1518 aa24.6■■□□□ 1.53
RBM47-215ENST00000515809 DNMBPQ6XZF7 1577 aa24.54■■□□□ 1.52
RBM47-215ENST00000515809 ABCC8Q09428 1581 aa24.54■■□□□ 1.52
RBM47-215ENST00000515809 URB2Q14146 1524 aaKnown RBP24.53■■□□□ 1.52
RBM47-215ENST00000515809 CUX2O14529 1486 aa24.51■■□□□ 1.51
RBM47-215ENST00000515809 TOPBP1Q92547 1522 aa24.48■■□□□ 1.51
RBM47-215ENST00000515809 BIVM-ERCC5R4GMW8 1640 aa24.43■■□□□ 1.5
RBM47-215ENST00000515809 CUX1P39880 1505 aa24.42■■□□□ 1.5
RBM47-215ENST00000515809 WRNQ14191 1432 aaPredicted RBP eCLIP24.42■■□□□ 1.5
RBM47-215ENST00000515809 TOP2BQ02880 1626 aa24.39■■□□□ 1.5
RBM47-215ENST00000515809 SYNJ1O43426 1573 aa24.37■■□□□ 1.49
RBM47-215ENST00000515809 FGD5Q6ZNL6 1462 aa24.3■■□□□ 1.48
RBM47-215ENST00000515809 POLA1P09884 1462 aaPredicted RBP24.28■■□□□ 1.48
RBM47-215ENST00000515809 IFT140Q96RY7 1462 aa24.25■■□□□ 1.47
RBM47-215ENST00000515809 TARBP1Q13395 1621 aaKnown RBP24.21■■□□□ 1.47
RBM47-215ENST00000515809 WDR97A6NE52 1622 aa24.21■■□□□ 1.47
RBM47-215ENST00000515809 SOGA1O94964 1423 aa24.15■■□□□ 1.46
RBM47-215ENST00000515809 RAD54L2Q9Y4B4 1467 aa24.12■■□□□ 1.45
RBM47-215ENST00000515809 EIF4G3O43432 1585 aaKnown RBP24.1■■□□□ 1.45
RBM47-215ENST00000515809 ABCA10Q8WWZ4 1543 aa24.09■■□□□ 1.45
RBM47-215ENST00000515809 ABCA5Q8WWZ7 1642 aa24.03■■□□□ 1.44
RBM47-215ENST00000515809 TRIM41Q8WV44 630 aa24.03■■□□□ 1.44
RBM47-215ENST00000515809 ZNF608Q9ULD9 1512 aaPredicted RBP24.03■■□□□ 1.44
RBM47-215ENST00000515809 PBRM1Q86U86 1689 aa24.01■■□□□ 1.43
RBM47-215ENST00000515809 CHIC1Q5VXU3 224 aa23.92■■□□□ 1.42
RBM47-215ENST00000515809 AQRO60306 1485 aaKnown RBP eCLIP23.92■■□□□ 1.42
RBM47-215ENST00000515809 GAPVD1Q14C86 1478 aa23.92■■□□□ 1.42
RBM47-215ENST00000515809 TDRD9Q8NDG6 1382 aaKnown RBP23.91■■□□□ 1.42
RBM47-215ENST00000515809 GRIN2BQ13224 1484 aa23.88■■□□□ 1.41
RBM47-215ENST00000515809 KIF27Q86VH2 1401 aa23.88■■□□□ 1.41
RBM47-215ENST00000515809 ERICH3Q5RHP9 1530 aa23.84■■□□□ 1.41
RBM47-215ENST00000515809 MAGI1Q96QZ7 1491 aaPredicted RBP23.81■■□□□ 1.4
RBM47-215ENST00000515809 CUL7Q14999 1698 aa23.8■■□□□ 1.4
RBM47-215ENST00000515809 SNAPC4Q5SXM2 1469 aa23.8■■□□□ 1.4
RBM47-215ENST00000515809 ADAMTS12P58397 1594 aa23.78■■□□□ 1.4
RBM47-215ENST00000515809 CHD1O14646 1710 aa23.76■■□□□ 1.39
RBM47-215ENST00000515809 EEA1Q15075 1411 aa23.74■■□□□ 1.39
RBM47-215ENST00000515809 SYNJ2O15056 1496 aa23.69■■□□□ 1.38
RBM47-215ENST00000515809 RUSC2Q8N2Y8 1516 aa23.69■■□□□ 1.38
RBM47-215ENST00000515809 FHAD1B1AJZ9 1412 aa23.66■■□□□ 1.38
RBM47-215ENST00000515809 IGF1RP08069 1367 aa23.62■■□□□ 1.37
RBM47-215ENST00000515809 GRIN2AQ12879 1464 aa23.58■■□□□ 1.37
RBM47-215ENST00000515809 CHMP7Q8WUX9 453 aaPredicted RBP23.56■■□□□ 1.36
RBM47-215ENST00000515809 FBLN2P98095 1184 aa23.55■■□□□ 1.36
RBM47-215ENST00000515809 CARMIL1Q5VZK9 1371 aa23.53■■□□□ 1.36
RBM47-215ENST00000515809 KIF21BO75037 1637 aa23.51■■□□□ 1.35
RBM47-215ENST00000515809 RAPGEF2Q9Y4G8 1499 aa23.5■■□□□ 1.35
RBM47-215ENST00000515809 CSRNP3Q8WYN3 585 aa23.49■■□□□ 1.35
RBM47-215ENST00000515809 PRXQ9BXM0 1461 aa23.49■■□□□ 1.35
RBM47-215ENST00000515809 FAM9AQ8IZU1 332 aaPredicted RBP23.47■■□□□ 1.35
RBM47-215ENST00000515809 CEP170Q5SW79 1584 aa23.46■■□□□ 1.35
RBM47-215ENST00000515809 CTTNBP2Q8WZ74 1663 aa23.45■■□□□ 1.34
RBM47-215ENST00000515809 NUP160Q12769 1436 aa23.42■■□□□ 1.34
RBM47-215ENST00000515809 OSCARQ8IYS5 282 aa23.42■■□□□ 1.34
RBM47-215ENST00000515809 CLASP1Q7Z460 1538 aa23.42■■□□□ 1.34
RBM47-215ENST00000515809 GOLGA3Q08378 1498 aa23.34■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms