RNA–Protein interactions for RNA: ENST00000515796.1

ABLIM3-210, Transcript of actin binding LIM protein family member 3, humanhuman

TSL 2

Gene ABLIM3, Length 530 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABLIM3-210ENST00000515796 NISCHQ9Y2I1 1504 aa24.22■■□□□ 1.47
ABLIM3-210ENST00000515796 CCDC180Q9P1Z9 1646 aa21.5■■□□□ 1.03
ABLIM3-210ENST00000515796 ABCC9O60706 1549 aa20.63■□□□□ 0.89
ABLIM3-210ENST00000515796 ZCCHC6Q5VYS8 1495 aaKnown RBP20.25■□□□□ 0.83
ABLIM3-210ENST00000515796 DCAF1Q9Y4B6 1507 aa20.09■□□□□ 0.81
ABLIM3-210ENST00000515796 NACADO15069 1562 aa20.08■□□□□ 0.81
ABLIM3-210ENST00000515796 MYO15BQ96JP2 1530 aa20.07■□□□□ 0.8
ABLIM3-210ENST00000515796 RB1CC1Q8TDY2 1594 aa20.04■□□□□ 0.8
ABLIM3-210ENST00000515796 DCAF8L2P0C7V8 631 aa20■□□□□ 0.79
ABLIM3-210ENST00000515796 UNC13AQ9UPW8 1703 aa19.68■□□□□ 0.74
ABLIM3-210ENST00000515796 SCRIBQ14160 1630 aa19.58■□□□□ 0.72
ABLIM3-210ENST00000515796 BICRAQ9NZM4 1560 aa19.41■□□□□ 0.7
ABLIM3-210ENST00000515796 PABPN1Q86U42 306 aaKnown RBP eCLIP19.27■□□□□ 0.68
ABLIM3-210ENST00000515796 SHROOM4Q9ULL8 1493 aa19.27■□□□□ 0.67
ABLIM3-210ENST00000515796 EIF4G1Q04637 1599 aaKnown RBP18.88■□□□□ 0.61
ABLIM3-210ENST00000515796 CECR2Q9BXF3 1484 aa18.8■□□□□ 0.6
ABLIM3-210ENST00000515796 BAZ1AQ9NRL2 1556 aaPredicted RBP18.77■□□□□ 0.6
ABLIM3-210ENST00000515796 SMARCA4P51532 1647 aa18.77■□□□□ 0.6
ABLIM3-210ENST00000515796 CC2D2AQ9P2K1 1620 aa18.73■□□□□ 0.59
ABLIM3-210ENST00000515796 MROH2BQ7Z745 1585 aa18.66■□□□□ 0.58
ABLIM3-210ENST00000515796 DNAJC5BQ9UF47 199 aa18.61■□□□□ 0.57
ABLIM3-210ENST00000515796 PEG3Q9GZU2 1588 aa18.59■□□□□ 0.57
ABLIM3-210ENST00000515796 SMARCA2P51531 1590 aa18.58■□□□□ 0.56
ABLIM3-210ENST00000515796 ATAD2BQ9ULI0 1458 aa18.54■□□□□ 0.56
ABLIM3-210ENST00000515796 RSF1Q96T23 1441 aaPredicted RBP18.53■□□□□ 0.56
ABLIM3-210ENST00000515796 WIZO95785 1651 aa18.5■□□□□ 0.55
ABLIM3-210ENST00000515796 NCAPD3P42695 1498 aa18.49■□□□□ 0.55
ABLIM3-210ENST00000515796 HMGXB3Q12766 1538 aa18.48■□□□□ 0.55
ABLIM3-210ENST00000515796 BAZ1BQ9UIG0 1483 aaKnown RBP18.42■□□□□ 0.54
ABLIM3-210ENST00000515796 TOP2AP11388 1531 aaKnown RBP18.33■□□□□ 0.52
ABLIM3-210ENST00000515796 SUPT5HO00267 1087 aaKnown RBP18.21■□□□□ 0.51
ABLIM3-210ENST00000515796 CCDC88BA6NC98 1476 aa18.07■□□□□ 0.48
ABLIM3-210ENST00000515796 LAMC3Q9Y6N6 1575 aa18■□□□□ 0.47
ABLIM3-210ENST00000515796 PRDM2Q13029 1718 aa17.96■□□□□ 0.47
ABLIM3-210ENST00000515796 NESP48681 1621 aa17.94■□□□□ 0.46
ABLIM3-210ENST00000515796 CADPSQ9ULU8 1353 aa17.94■□□□□ 0.46
ABLIM3-210ENST00000515796 CFTRP13569 1480 aa17.93■□□□□ 0.46
ABLIM3-210ENST00000515796 KIF21AQ7Z4S6 1674 aa17.83■□□□□ 0.45
ABLIM3-210ENST00000515796 PDS5BQ9NTI5 1447 aa17.82■□□□□ 0.44
ABLIM3-210ENST00000515796 ERCC6Q03468 1493 aa17.78■□□□□ 0.44
ABLIM3-210ENST00000515796 FANCD2Q9BXW9 1451 aa17.76■□□□□ 0.43
ABLIM3-210ENST00000515796 CEP164Q9UPV0 1460 aa17.73■□□□□ 0.43
ABLIM3-210ENST00000515796 THOC2Q8NI27 1593 aaKnown RBP17.68■□□□□ 0.42
ABLIM3-210ENST00000515796 MRC2Q9UBG0 1479 aa17.64■□□□□ 0.41
ABLIM3-210ENST00000515796 WDR62O43379 1518 aa17.6■□□□□ 0.41
ABLIM3-210ENST00000515796 URB2Q14146 1524 aaKnown RBP17.57■□□□□ 0.4
ABLIM3-210ENST00000515796 ABCC8Q09428 1581 aa17.55■□□□□ 0.4
ABLIM3-210ENST00000515796 DNMBPQ6XZF7 1577 aa17.55■□□□□ 0.4
ABLIM3-210ENST00000515796 TOPBP1Q92547 1522 aa17.52■□□□□ 0.4
ABLIM3-210ENST00000515796 CUX2O14529 1486 aa17.51■□□□□ 0.39
ABLIM3-210ENST00000515796 CUX1P39880 1505 aa17.5■□□□□ 0.39
ABLIM3-210ENST00000515796 BIVM-ERCC5R4GMW8 1640 aa17.48■□□□□ 0.39
ABLIM3-210ENST00000515796 WRNQ14191 1432 aaPredicted RBP eCLIP17.47■□□□□ 0.39
ABLIM3-210ENST00000515796 TOP2BQ02880 1626 aa17.46■□□□□ 0.39
ABLIM3-210ENST00000515796 SYNJ1O43426 1573 aa17.45■□□□□ 0.38
ABLIM3-210ENST00000515796 FGD5Q6ZNL6 1462 aa17.39■□□□□ 0.37
ABLIM3-210ENST00000515796 POLA1P09884 1462 aaPredicted RBP17.38■□□□□ 0.37
ABLIM3-210ENST00000515796 TARBP1Q13395 1621 aaKnown RBP17.34■□□□□ 0.37
ABLIM3-210ENST00000515796 IFT140Q96RY7 1462 aa17.34■□□□□ 0.37
ABLIM3-210ENST00000515796 WDR97A6NE52 1622 aa17.32■□□□□ 0.36
ABLIM3-210ENST00000515796 SOGA1O94964 1423 aa17.29■□□□□ 0.36
ABLIM3-210ENST00000515796 RAD54L2Q9Y4B4 1467 aa17.28■□□□□ 0.36
ABLIM3-210ENST00000515796 ABCA10Q8WWZ4 1543 aa17.25■□□□□ 0.35
ABLIM3-210ENST00000515796 EIF4G3O43432 1585 aaKnown RBP17.23■□□□□ 0.35
ABLIM3-210ENST00000515796 ZNF608Q9ULD9 1512 aaPredicted RBP17.21■□□□□ 0.35
ABLIM3-210ENST00000515796 TRIM41Q8WV44 630 aa17.21■□□□□ 0.35
ABLIM3-210ENST00000515796 ABCA5Q8WWZ7 1642 aa17.19■□□□□ 0.34
ABLIM3-210ENST00000515796 CHIC1Q5VXU3 224 aa17.18■□□□□ 0.34
ABLIM3-210ENST00000515796 PBRM1Q86U86 1689 aa17.16■□□□□ 0.34
ABLIM3-210ENST00000515796 TDRD9Q8NDG6 1382 aaKnown RBP17.14■□□□□ 0.33
ABLIM3-210ENST00000515796 AQRO60306 1485 aaKnown RBP eCLIP17.13■□□□□ 0.33
ABLIM3-210ENST00000515796 GAPVD1Q14C86 1478 aa17.12■□□□□ 0.33
ABLIM3-210ENST00000515796 KIF27Q86VH2 1401 aa17.09■□□□□ 0.33
ABLIM3-210ENST00000515796 GRIN2BQ13224 1484 aa17.08■□□□□ 0.32
ABLIM3-210ENST00000515796 ERICH3Q5RHP9 1530 aa17.06■□□□□ 0.32
ABLIM3-210ENST00000515796 MAGI1Q96QZ7 1491 aaPredicted RBP17.03■□□□□ 0.32
ABLIM3-210ENST00000515796 SNAPC4Q5SXM2 1469 aa17.02■□□□□ 0.32
ABLIM3-210ENST00000515796 CUL7Q14999 1698 aa17.01■□□□□ 0.31
ABLIM3-210ENST00000515796 ADAMTS12P58397 1594 aa17■□□□□ 0.31
ABLIM3-210ENST00000515796 RUSC2Q8N2Y8 1516 aa17■□□□□ 0.31
ABLIM3-210ENST00000515796 CHD1O14646 1710 aa16.99■□□□□ 0.31
ABLIM3-210ENST00000515796 EEA1Q15075 1411 aa16.97■□□□□ 0.31
ABLIM3-210ENST00000515796 IGF1RP08069 1367 aa16.95■□□□□ 0.3
ABLIM3-210ENST00000515796 SYNJ2O15056 1496 aa16.94■□□□□ 0.3
ABLIM3-210ENST00000515796 FHAD1B1AJZ9 1412 aa16.93■□□□□ 0.3
ABLIM3-210ENST00000515796 GRIN2AQ12879 1464 aa16.87■□□□□ 0.29
ABLIM3-210ENST00000515796 CARMIL1Q5VZK9 1371 aa16.87■□□□□ 0.29
ABLIM3-210ENST00000515796 CHMP7Q8WUX9 453 aaPredicted RBP16.85■□□□□ 0.29
ABLIM3-210ENST00000515796 FBLN2P98095 1184 aa16.84■□□□□ 0.29
ABLIM3-210ENST00000515796 CSRNP3Q8WYN3 585 aa16.84■□□□□ 0.29
ABLIM3-210ENST00000515796 PRXQ9BXM0 1461 aa16.83■□□□□ 0.28
ABLIM3-210ENST00000515796 RAPGEF2Q9Y4G8 1499 aa16.82■□□□□ 0.28
ABLIM3-210ENST00000515796 KIF21BO75037 1637 aa16.81■□□□□ 0.28
ABLIM3-210ENST00000515796 FAM9AQ8IZU1 332 aaPredicted RBP16.81■□□□□ 0.28
ABLIM3-210ENST00000515796 CEP170Q5SW79 1584 aa16.79■□□□□ 0.28
ABLIM3-210ENST00000515796 NUP160Q12769 1436 aa16.78■□□□□ 0.28
ABLIM3-210ENST00000515796 OSCARQ8IYS5 282 aa16.77■□□□□ 0.28
ABLIM3-210ENST00000515796 CLASP1Q7Z460 1538 aa16.76■□□□□ 0.27
ABLIM3-210ENST00000515796 CTTNBP2Q8WZ74 1663 aa16.76■□□□□ 0.27
ABLIM3-210ENST00000515796 GOLGA3Q08378 1498 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms