RNA–Protein interactions for RNA: ENST00000515757.5

NDNF-204, Transcript of neuron derived neurotrophic factor, humanhuman

TSL 4

Gene NDNF, Length 564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDNF-204ENST00000515757 NISCHQ9Y2I1 1504 aa37.65■■■■□ 3.62
NDNF-204ENST00000515757 CCDC180Q9P1Z9 1646 aa33.45■■■□□ 2.95
NDNF-204ENST00000515757 ABCC9O60706 1549 aa32.89■■■□□ 2.86
NDNF-204ENST00000515757 DCAF8L2P0C7V8 631 aa31.58■■■□□ 2.65
NDNF-204ENST00000515757 RB1CC1Q8TDY2 1594 aa31.54■■■□□ 2.64
NDNF-204ENST00000515757 NACADO15069 1562 aa31.48■■■□□ 2.63
NDNF-204ENST00000515757 ZCCHC6Q5VYS8 1495 aaKnown RBP31.33■■■□□ 2.61
NDNF-204ENST00000515757 MYO15BQ96JP2 1530 aa31.24■■■□□ 2.59
NDNF-204ENST00000515757 DCAF1Q9Y4B6 1507 aa31.09■■■□□ 2.57
NDNF-204ENST00000515757 UNC13AQ9UPW8 1703 aa30.87■■■□□ 2.53
NDNF-204ENST00000515757 PABPN1Q86U42 306 aaKnown RBP eCLIP30.78■■■□□ 2.52
NDNF-204ENST00000515757 BICRAQ9NZM4 1560 aa30.64■■■□□ 2.5
NDNF-204ENST00000515757 SCRIBQ14160 1630 aa30.58■■■□□ 2.49
NDNF-204ENST00000515757 DNAJC5BQ9UF47 199 aa30.34■■■□□ 2.45
NDNF-204ENST00000515757 SHROOM4Q9ULL8 1493 aa30.19■■■□□ 2.42
NDNF-204ENST00000515757 EIF4G1Q04637 1599 aaKnown RBP29.81■■■□□ 2.36
NDNF-204ENST00000515757 CC2D2AQ9P2K1 1620 aa29.73■■■□□ 2.35
NDNF-204ENST00000515757 CECR2Q9BXF3 1484 aa29.54■■■□□ 2.32
NDNF-204ENST00000515757 SMARCA4P51532 1647 aa29.22■■■□□ 2.27
NDNF-204ENST00000515757 BAZ1AQ9NRL2 1556 aaPredicted RBP29.15■■■□□ 2.26
NDNF-204ENST00000515757 ATAD2BQ9ULI0 1458 aa29.1■■■□□ 2.25
NDNF-204ENST00000515757 NCAPD3P42695 1498 aa29.08■■■□□ 2.25
NDNF-204ENST00000515757 MROH2BQ7Z745 1585 aa29.04■■■□□ 2.24
NDNF-204ENST00000515757 SMARCA2P51531 1590 aa29.01■■■□□ 2.24
NDNF-204ENST00000515757 PEG3Q9GZU2 1588 aa28.91■■■□□ 2.22
NDNF-204ENST00000515757 HMGXB3Q12766 1538 aa28.89■■■□□ 2.21
NDNF-204ENST00000515757 BAZ1BQ9UIG0 1483 aaKnown RBP28.84■■■□□ 2.21
NDNF-204ENST00000515757 WIZO95785 1651 aa28.73■■■□□ 2.19
NDNF-204ENST00000515757 RSF1Q96T23 1441 aaPredicted RBP28.68■■■□□ 2.18
NDNF-204ENST00000515757 NESP48681 1621 aa28.45■■■□□ 2.14
NDNF-204ENST00000515757 TOP2AP11388 1531 aaKnown RBP28.38■■■□□ 2.13
NDNF-204ENST00000515757 ERCC6Q03468 1493 aa28.32■■■□□ 2.12
NDNF-204ENST00000515757 LAMC3Q9Y6N6 1575 aa28.29■■■□□ 2.12
NDNF-204ENST00000515757 CADPSQ9ULU8 1353 aa28.24■■■□□ 2.11
NDNF-204ENST00000515757 PDS5BQ9NTI5 1447 aa28.12■■■□□ 2.09
NDNF-204ENST00000515757 CCDC88BA6NC98 1476 aa28.09■■■□□ 2.09
NDNF-204ENST00000515757 KIF21AQ7Z4S6 1674 aa28.08■■■□□ 2.09
NDNF-204ENST00000515757 CFTRP13569 1480 aa28.04■■■□□ 2.08
NDNF-204ENST00000515757 CUX2O14529 1486 aa28.01■■■□□ 2.07
NDNF-204ENST00000515757 THOC2Q8NI27 1593 aaKnown RBP27.99■■■□□ 2.07
NDNF-204ENST00000515757 SUPT5HO00267 1087 aaKnown RBP27.96■■■□□ 2.07
NDNF-204ENST00000515757 FANCD2Q9BXW9 1451 aa27.9■■■□□ 2.06
NDNF-204ENST00000515757 CEP164Q9UPV0 1460 aa27.86■■■□□ 2.05
NDNF-204ENST00000515757 MRC2Q9UBG0 1479 aa27.84■■■□□ 2.05
NDNF-204ENST00000515757 PRDM2Q13029 1718 aa27.79■■■□□ 2.04
NDNF-204ENST00000515757 WDR62O43379 1518 aa27.75■■■□□ 2.03
NDNF-204ENST00000515757 URB2Q14146 1524 aaKnown RBP27.65■■■□□ 2.02
NDNF-204ENST00000515757 TOPBP1Q92547 1522 aa27.46■■□□□ 1.99
NDNF-204ENST00000515757 ABCC8Q09428 1581 aa27.41■■□□□ 1.98
NDNF-204ENST00000515757 DNMBPQ6XZF7 1577 aa27.39■■□□□ 1.98
NDNF-204ENST00000515757 DNAJC5Q9H3Z4 198 aa27.32■■□□□ 1.96
NDNF-204ENST00000515757 IFT140Q96RY7 1462 aa27.28■■□□□ 1.96
NDNF-204ENST00000515757 CUX1P39880 1505 aa27.24■■□□□ 1.95
NDNF-204ENST00000515757 ZNF608Q9ULD9 1512 aaPredicted RBP27.22■■□□□ 1.95
NDNF-204ENST00000515757 POLA1P09884 1462 aaPredicted RBP27.22■■□□□ 1.95
NDNF-204ENST00000515757 TARBP1Q13395 1621 aaKnown RBP27.16■■□□□ 1.94
NDNF-204ENST00000515757 FGD5Q6ZNL6 1462 aa27.15■■□□□ 1.94
NDNF-204ENST00000515757 RAD54L2Q9Y4B4 1467 aa27.15■■□□□ 1.94
NDNF-204ENST00000515757 SOGA1O94964 1423 aa27.13■■□□□ 1.93
NDNF-204ENST00000515757 AQRO60306 1485 aaKnown RBP eCLIP27.06■■□□□ 1.92
NDNF-204ENST00000515757 EIF4G3O43432 1585 aaKnown RBP27.06■■□□□ 1.92
NDNF-204ENST00000515757 WRNQ14191 1432 aaPredicted RBP eCLIP27.02■■□□□ 1.92
NDNF-204ENST00000515757 TDRD9Q8NDG6 1382 aaKnown RBP27■■□□□ 1.91
NDNF-204ENST00000515757 SYNJ1O43426 1573 aa26.97■■□□□ 1.91
NDNF-204ENST00000515757 TOP2BQ02880 1626 aa26.95■■□□□ 1.91
NDNF-204ENST00000515757 BIVM-ERCC5R4GMW8 1640 aa26.95■■□□□ 1.91
NDNF-204ENST00000515757 OSCARQ8IYS5 282 aa26.9■■□□□ 1.9
NDNF-204ENST00000515757 WDR97A6NE52 1622 aa26.9■■□□□ 1.9
NDNF-204ENST00000515757 ABCA10Q8WWZ4 1543 aa26.86■■□□□ 1.89
NDNF-204ENST00000515757 GRIN2BQ13224 1484 aa26.79■■□□□ 1.88
NDNF-204ENST00000515757 GAPVD1Q14C86 1478 aa26.79■■□□□ 1.88
NDNF-204ENST00000515757 SNAPC4Q5SXM2 1469 aa26.78■■□□□ 1.88
NDNF-204ENST00000515757 FBLN2P98095 1184 aa26.77■■□□□ 1.88
NDNF-204ENST00000515757 ABCA5Q8WWZ7 1642 aa26.76■■□□□ 1.87
NDNF-204ENST00000515757 CHD1O14646 1710 aa26.76■■□□□ 1.87
NDNF-204ENST00000515757 PBRM1Q86U86 1689 aa26.73■■□□□ 1.87
NDNF-204ENST00000515757 MAGI1Q96QZ7 1491 aaPredicted RBP26.7■■□□□ 1.87
NDNF-204ENST00000515757 CHMP7Q8WUX9 453 aaPredicted RBP26.66■■□□□ 1.86
NDNF-204ENST00000515757 SYNJ2O15056 1496 aa26.62■■□□□ 1.85
NDNF-204ENST00000515757 ERICH3Q5RHP9 1530 aa26.52■■□□□ 1.84
NDNF-204ENST00000515757 ADAMTS12P58397 1594 aa26.5■■□□□ 1.83
NDNF-204ENST00000515757 FHAD1B1AJZ9 1412 aa26.47■■□□□ 1.83
NDNF-204ENST00000515757 RIMBP3CA6NJZ7 1639 aa26.47■■□□□ 1.83
NDNF-204ENST00000515757 RIMBP3BA6NNM3 1639 aa26.47■■□□□ 1.83
NDNF-204ENST00000515757 RIMBP3Q9UFD9 1639 aa26.47■■□□□ 1.83
NDNF-204ENST00000515757 KIF27Q86VH2 1401 aa26.46■■□□□ 1.83
NDNF-204ENST00000515757 CLASP1Q7Z460 1538 aa26.44■■□□□ 1.82
NDNF-204ENST00000515757 GRIN2AQ12879 1464 aa26.44■■□□□ 1.82
NDNF-204ENST00000515757 ARHGEF11O15085 1522 aa26.44■■□□□ 1.82
NDNF-204ENST00000515757 TRIM41Q8WV44 630 aa26.42■■□□□ 1.82
NDNF-204ENST00000515757 IGF1RP08069 1367 aa26.4■■□□□ 1.82
NDNF-204ENST00000515757 CEP170Q5SW79 1584 aa26.33■■□□□ 1.81
NDNF-204ENST00000515757 NUP160Q12769 1436 aa26.33■■□□□ 1.81
NDNF-204ENST00000515757 RUSC2Q8N2Y8 1516 aa26.28■■□□□ 1.8
NDNF-204ENST00000515757 CUL7Q14999 1698 aa26.26■■□□□ 1.79
NDNF-204ENST00000515757 CYB5RLQ6IPT4 315 aa26.26■■□□□ 1.79
NDNF-204ENST00000515757 ARAP1Q96P48 1450 aa26.23■■□□□ 1.79
NDNF-204ENST00000515757 CARMIL1Q5VZK9 1371 aa26.23■■□□□ 1.79
NDNF-204ENST00000515757 ERCC6L2Q5T890 1561 aa26.14■■□□□ 1.78
NDNF-204ENST00000515757 SHROOM2Q13796 1616 aa26.13■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 157 ms