RNA–Protein interactions for RNA: ENST00000515514.1

CDK18-223, Transcript of cyclin dependent kinase 18, humanhuman

TSL 4

Gene CDK18, Length 541 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK18-223ENST00000515514 NISCHQ9Y2I1 1504 aa30.88■■■□□ 2.53
CDK18-223ENST00000515514 CCDC180Q9P1Z9 1646 aa27.74■■■□□ 2.03
CDK18-223ENST00000515514 ABCC9O60706 1549 aa27.46■■□□□ 1.99
CDK18-223ENST00000515514 RB1CC1Q8TDY2 1594 aa26.29■■□□□ 1.8
CDK18-223ENST00000515514 NACADO15069 1562 aa26.15■■□□□ 1.78
CDK18-223ENST00000515514 MYO15BQ96JP2 1530 aa25.89■■□□□ 1.74
CDK18-223ENST00000515514 DCAF8L2P0C7V8 631 aa25.78■■□□□ 1.72
CDK18-223ENST00000515514 ZCCHC6Q5VYS8 1495 aaKnown RBP25.68■■□□□ 1.7
CDK18-223ENST00000515514 UNC13AQ9UPW8 1703 aa25.66■■□□□ 1.7
CDK18-223ENST00000515514 DCAF1Q9Y4B6 1507 aa25.59■■□□□ 1.69
CDK18-223ENST00000515514 DNAJC5BQ9UF47 199 aa25.52■■□□□ 1.68
CDK18-223ENST00000515514 BICRAQ9NZM4 1560 aa25.49■■□□□ 1.67
CDK18-223ENST00000515514 PABPN1Q86U42 306 aaKnown RBP eCLIP25.49■■□□□ 1.676e-7■■□□□ 12
CDK18-223ENST00000515514 SHROOM4Q9ULL8 1493 aa25.3■■□□□ 1.64
CDK18-223ENST00000515514 SCRIBQ14160 1630 aa25.2■■□□□ 1.62
CDK18-223ENST00000515514 EIF4G1Q04637 1599 aaKnown RBP24.86■■□□□ 1.57
CDK18-223ENST00000515514 CC2D2AQ9P2K1 1620 aa24.86■■□□□ 1.57
CDK18-223ENST00000515514 CECR2Q9BXF3 1484 aa24.75■■□□□ 1.55
CDK18-223ENST00000515514 NCAPD3P42695 1498 aa24.1■■□□□ 1.45
CDK18-223ENST00000515514 SMARCA4P51532 1647 aa24.09■■□□□ 1.45
CDK18-223ENST00000515514 ATAD2BQ9ULI0 1458 aa24.04■■□□□ 1.44
CDK18-223ENST00000515514 SMARCA2P51531 1590 aa24.03■■□□□ 1.44
CDK18-223ENST00000515514 HMGXB3Q12766 1538 aa24.01■■□□□ 1.43
CDK18-223ENST00000515514 BAZ1AQ9NRL2 1556 aaPredicted RBP24■■□□□ 1.43
CDK18-223ENST00000515514 PEG3Q9GZU2 1588 aa23.9■■□□□ 1.42
CDK18-223ENST00000515514 BAZ1BQ9UIG0 1483 aaKnown RBP23.83■■□□□ 1.41
CDK18-223ENST00000515514 MROH2BQ7Z745 1585 aa23.78■■□□□ 1.4
CDK18-223ENST00000515514 ERCC6Q03468 1493 aa23.73■■□□□ 1.39
CDK18-223ENST00000515514 CUX2O14529 1486 aa23.7■■□□□ 1.38
CDK18-223ENST00000515514 NESP48681 1621 aa23.62■■□□□ 1.37
CDK18-223ENST00000515514 LAMC3Q9Y6N6 1575 aa23.58■■□□□ 1.37
CDK18-223ENST00000515514 WIZO95785 1651 aa23.48■■□□□ 1.35
CDK18-223ENST00000515514 THOC2Q8NI27 1593 aaKnown RBP23.46■■□□□ 1.35
CDK18-223ENST00000515514 PDS5BQ9NTI5 1447 aa23.39■■□□□ 1.33
CDK18-223ENST00000515514 DNAJC5Q9H3Z4 198 aa23.38■■□□□ 1.33
CDK18-223ENST00000515514 KIF21AQ7Z4S6 1674 aa23.38■■□□□ 1.33
CDK18-223ENST00000515514 CADPSQ9ULU8 1353 aa23.34■■□□□ 1.33
CDK18-223ENST00000515514 RSF1Q96T23 1441 aaPredicted RBP23.32■■□□□ 1.32
CDK18-223ENST00000515514 TOP2AP11388 1531 aaKnown RBP23.28■■□□□ 1.32
CDK18-223ENST00000515514 MRC2Q9UBG0 1479 aa23.21■■□□□ 1.31
CDK18-223ENST00000515514 WDR62O43379 1518 aa23.18■■□□□ 1.3
CDK18-223ENST00000515514 CFTRP13569 1480 aa23.15■■□□□ 1.3
CDK18-223ENST00000515514 CEP164Q9UPV0 1460 aa23.15■■□□□ 1.3
CDK18-223ENST00000515514 FANCD2Q9BXW9 1451 aa23.11■■□□□ 1.29
CDK18-223ENST00000515514 PRDM2Q13029 1718 aa22.99■■□□□ 1.27
CDK18-223ENST00000515514 CCDC88BA6NC98 1476 aa22.92■■□□□ 1.26
CDK18-223ENST00000515514 URB2Q14146 1524 aaKnown RBP22.91■■□□□ 1.26
CDK18-223ENST00000515514 TOPBP1Q92547 1522 aa22.69■■□□□ 1.22
CDK18-223ENST00000515514 IFT140Q96RY7 1462 aa22.67■■□□□ 1.22
CDK18-223ENST00000515514 ABCC8Q09428 1581 aa22.67■■□□□ 1.22
CDK18-223ENST00000515514 DNMBPQ6XZF7 1577 aa22.65■■□□□ 1.22
CDK18-223ENST00000515514 ZNF608Q9ULD9 1512 aaPredicted RBP22.57■■□□□ 1.2
CDK18-223ENST00000515514 EIF4G3O43432 1585 aaKnown RBP22.54■■□□□ 1.2
CDK18-223ENST00000515514 TARBP1Q13395 1621 aaKnown RBP22.49■■□□□ 1.19
CDK18-223ENST00000515514 OSCARQ8IYS5 282 aa22.49■■□□□ 1.19
CDK18-223ENST00000515514 POLA1P09884 1462 aaPredicted RBP22.47■■□□□ 1.19
CDK18-223ENST00000515514 WDR97A6NE52 1622 aa22.36■■□□□ 1.17
CDK18-223ENST00000515514 TRIM41Q8WV44 630 aa22.36■■□□□ 1.17
CDK18-223ENST00000515514 CUX1P39880 1505 aa22.35■■□□□ 1.17
CDK18-223ENST00000515514 AQRO60306 1485 aaKnown RBP eCLIP22.34■■□□□ 1.17
CDK18-223ENST00000515514 FGD5Q6ZNL6 1462 aa22.34■■□□□ 1.17
CDK18-223ENST00000515514 RAD54L2Q9Y4B4 1467 aa22.32■■□□□ 1.16
CDK18-223ENST00000515514 SOGA1O94964 1423 aa22.31■■□□□ 1.16
CDK18-223ENST00000515514 CHD1O14646 1710 aa22.3■■□□□ 1.16
CDK18-223ENST00000515514 RIMBP3CA6NJZ7 1639 aa22.29■■□□□ 1.16
CDK18-223ENST00000515514 RIMBP3BA6NNM3 1639 aa22.29■■□□□ 1.16
CDK18-223ENST00000515514 RIMBP3Q9UFD9 1639 aa22.29■■□□□ 1.16
CDK18-223ENST00000515514 SUPT5HO00267 1087 aaKnown RBP22.26■■□□□ 1.15
CDK18-223ENST00000515514 ARHGEF11O15085 1522 aa22.25■■□□□ 1.15
CDK18-223ENST00000515514 TDRD9Q8NDG6 1382 aaKnown RBP22.22■■□□□ 1.15
CDK18-223ENST00000515514 SNAPC4Q5SXM2 1469 aa22.2■■□□□ 1.14
CDK18-223ENST00000515514 MAGI1Q96QZ7 1491 aaPredicted RBP22.18■■□□□ 1.14
CDK18-223ENST00000515514 GRIN2BQ13224 1484 aa22.16■■□□□ 1.14
CDK18-223ENST00000515514 ABCA10Q8WWZ4 1543 aa22.13■■□□□ 1.13
CDK18-223ENST00000515514 PBRM1Q86U86 1689 aa22.11■■□□□ 1.13
CDK18-223ENST00000515514 ABCA5Q8WWZ7 1642 aa22.11■■□□□ 1.13
CDK18-223ENST00000515514 FBLN2P98095 1184 aa22.1■■□□□ 1.13
CDK18-223ENST00000515514 CLASP1Q7Z460 1538 aa22.09■■□□□ 1.13
CDK18-223ENST00000515514 SYNJ2O15056 1496 aa22.09■■□□□ 1.13
CDK18-223ENST00000515514 SYNJ1O43426 1573 aa22.08■■□□□ 1.13
CDK18-223ENST00000515514 GAPVD1Q14C86 1478 aa22.08■■□□□ 1.12
CDK18-223ENST00000515514 BIVM-ERCC5R4GMW8 1640 aa22.07■■□□□ 1.12
CDK18-223ENST00000515514 TOP2BQ02880 1626 aa22.06■■□□□ 1.12
CDK18-223ENST00000515514 WRNQ14191 1432 aaPredicted RBP eCLIP22.04■■□□□ 1.12
CDK18-223ENST00000515514 ARAP1Q96P48 1450 aa22.03■■□□□ 1.12
CDK18-223ENST00000515514 CHMP7Q8WUX9 453 aaPredicted RBP22■■□□□ 1.11
CDK18-223ENST00000515514 ADAMTS12P58397 1594 aa21.94■■□□□ 1.1
CDK18-223ENST00000515514 CYB5RLQ6IPT4 315 aa21.92■■□□□ 1.1
CDK18-223ENST00000515514 GRIN2AQ12879 1464 aa21.89■■□□□ 1.09
CDK18-223ENST00000515514 ERICH3Q5RHP9 1530 aa21.86■■□□□ 1.09
CDK18-223ENST00000515514 FHAD1B1AJZ9 1412 aa21.82■■□□□ 1.08
CDK18-223ENST00000515514 NUP160Q12769 1436 aa21.81■■□□□ 1.08
CDK18-223ENST00000515514 CEP170Q5SW79 1584 aa21.8■■□□□ 1.08
CDK18-223ENST00000515514 SHROOM2Q13796 1616 aa21.73■■□□□ 1.07
CDK18-223ENST00000515514 ERCC6L2Q5T890 1561 aa21.68■■□□□ 1.06
CDK18-223ENST00000515514 RUSC2Q8N2Y8 1516 aa21.64■■□□□ 1.05
CDK18-223ENST00000515514 TRHP20396 242 aaPredicted RBP21.63■■□□□ 1.05
CDK18-223ENST00000515514 CUL7Q14999 1698 aa21.6■■□□□ 1.05
CDK18-223ENST00000515514 KIF27Q86VH2 1401 aa21.59■■□□□ 1.05
CDK18-223ENST00000515514 PRG4Q92954 1404 aaPredicted RBP21.53■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms