RNA–Protein interactions for RNA: ENST00000515508.6

SPOP-220, Transcript of speckle type BTB/POZ protein, humanhuman

TSL 2

Gene SPOP, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOP-220ENST00000515508 NISCHQ9Y2I1 1504 aa46.52■■■■■ 5.04
SPOP-220ENST00000515508 CCDC180Q9P1Z9 1646 aa41.87■■■■■ 4.29
SPOP-220ENST00000515508 ABCC9O60706 1549 aa41.78■■■■■ 4.28
SPOP-220ENST00000515508 RB1CC1Q8TDY2 1594 aa39.83■■■■□ 3.97
SPOP-220ENST00000515508 NACADO15069 1562 aa39.55■■■■□ 3.92
SPOP-220ENST00000515508 DNAJC5BQ9UF47 199 aa39.21■■■■□ 3.87
SPOP-220ENST00000515508 DCAF8L2P0C7V8 631 aa39.06■■■■□ 3.84
SPOP-220ENST00000515508 MYO15BQ96JP2 1530 aa39.03■■■■□ 3.84
SPOP-220ENST00000515508 UNC13AQ9UPW8 1703 aa38.98■■■■□ 3.83
SPOP-220ENST00000515508 PABPN1Q86U42 306 aaKnown RBP eCLIP38.8■■■■□ 3.8
SPOP-220ENST00000515508 BICRAQ9NZM4 1560 aa38.69■■■■□ 3.78
SPOP-220ENST00000515508 ZCCHC6Q5VYS8 1495 aaKnown RBP38.58■■■■□ 3.77
SPOP-220ENST00000515508 DCAF1Q9Y4B6 1507 aa38.49■■■■□ 3.75
SPOP-220ENST00000515508 SHROOM4Q9ULL8 1493 aa38.22■■■■□ 3.71
SPOP-220ENST00000515508 SCRIBQ14160 1630 aa38.05■■■■□ 3.68
SPOP-220ENST00000515508 CC2D2AQ9P2K1 1620 aa37.81■■■■□ 3.64
SPOP-220ENST00000515508 EIF4G1Q04637 1599 aaKnown RBP37.72■■■■□ 3.63
SPOP-220ENST00000515508 CECR2Q9BXF3 1484 aa37.67■■■■□ 3.62
SPOP-220ENST00000515508 NCAPD3P42695 1498 aa36.49■■■■□ 3.43
SPOP-220ENST00000515508 ATAD2BQ9ULI0 1458 aa36.35■■■■□ 3.41
SPOP-220ENST00000515508 SMARCA4P51532 1647 aa36.34■■■■□ 3.41
SPOP-220ENST00000515508 SMARCA2P51531 1590 aa36.27■■■■□ 3.4
SPOP-220ENST00000515508 HMGXB3Q12766 1538 aa36.26■■■■□ 3.4
SPOP-220ENST00000515508 BAZ1AQ9NRL2 1556 aaPredicted RBP36.14■■■■□ 3.38
SPOP-220ENST00000515508 CUX2O14529 1486 aa36.12■■■■□ 3.37
SPOP-220ENST00000515508 ERCC6Q03468 1493 aa36.08■■■■□ 3.37
SPOP-220ENST00000515508 DNAJC5Q9H3Z4 198 aa36.07■■■■□ 3.36
SPOP-220ENST00000515508 PEG3Q9GZU2 1588 aa36.03■■■■□ 3.36
SPOP-220ENST00000515508 BAZ1BQ9UIG0 1483 aaKnown RBP35.99■■■■□ 3.35
SPOP-220ENST00000515508 NESP48681 1621 aa35.89■■■■□ 3.34
SPOP-220ENST00000515508 MROH2BQ7Z745 1585 aa35.83■■■■□ 3.33
SPOP-220ENST00000515508 LAMC3Q9Y6N6 1575 aa35.71■■■■□ 3.31
SPOP-220ENST00000515508 THOC2Q8NI27 1593 aaKnown RBP35.64■■■■□ 3.3
SPOP-220ENST00000515508 KIF21AQ7Z4S6 1674 aa35.5■■■■□ 3.27
SPOP-220ENST00000515508 PDS5BQ9NTI5 1447 aa35.43■■■■□ 3.26
SPOP-220ENST00000515508 WIZO95785 1651 aa35.4■■■■□ 3.26
SPOP-220ENST00000515508 CADPSQ9ULU8 1353 aa35.33■■■■□ 3.25
SPOP-220ENST00000515508 MRC2Q9UBG0 1479 aa35.16■■■■□ 3.22
SPOP-220ENST00000515508 WDR62O43379 1518 aa35.12■■■■□ 3.21
SPOP-220ENST00000515508 RSF1Q96T23 1441 aaPredicted RBP35.04■■■■□ 3.2
SPOP-220ENST00000515508 CEP164Q9UPV0 1460 aa35■■■■□ 3.19
SPOP-220ENST00000515508 TOP2AP11388 1531 aaKnown RBP34.98■■■■□ 3.19
SPOP-220ENST00000515508 CFTRP13569 1480 aa34.96■■■■□ 3.19
SPOP-220ENST00000515508 FANCD2Q9BXW9 1451 aa34.95■■■■□ 3.19
SPOP-220ENST00000515508 PRDM2Q13029 1718 aa34.7■■■■□ 3.15
SPOP-220ENST00000515508 URB2Q14146 1524 aaKnown RBP34.68■■■■□ 3.14
SPOP-220ENST00000515508 CCDC88BA6NC98 1476 aa34.52■■■■□ 3.12
SPOP-220ENST00000515508 TRIM41Q8WV44 630 aa34.38■■■■□ 3.09
SPOP-220ENST00000515508 OSCARQ8IYS5 282 aa34.33■■■■□ 3.09
SPOP-220ENST00000515508 IFT140Q96RY7 1462 aa34.3■■■■□ 3.08
SPOP-220ENST00000515508 TOPBP1Q92547 1522 aa34.3■■■■□ 3.08
SPOP-220ENST00000515508 ZNF608Q9ULD9 1512 aaPredicted RBP34.24■■■■□ 3.07
SPOP-220ENST00000515508 ABCC8Q09428 1581 aa34.22■■■■□ 3.07
SPOP-220ENST00000515508 DNMBPQ6XZF7 1577 aa34.19■■■■□ 3.06
SPOP-220ENST00000515508 EIF4G3O43432 1585 aaKnown RBP34.11■■■■□ 3.05
SPOP-220ENST00000515508 TARBP1Q13395 1621 aaKnown RBP34.04■■■■□ 3.04
SPOP-220ENST00000515508 RIMBP3CA6NJZ7 1639 aa34.01■■■■□ 3.04
SPOP-220ENST00000515508 RIMBP3BA6NNM3 1639 aa34.01■■■■□ 3.04
SPOP-220ENST00000515508 RIMBP3Q9UFD9 1639 aa34.01■■■■□ 3.04
SPOP-220ENST00000515508 POLA1P09884 1462 aaPredicted RBP33.95■■■■□ 3.02
SPOP-220ENST00000515508 ARHGEF11O15085 1522 aa33.89■■■■□ 3.02
SPOP-220ENST00000515508 AQRO60306 1485 aaKnown RBP eCLIP33.88■■■■□ 3.011e-6■■■■■ 27.6
SPOP-220ENST00000515508 CHD1O14646 1710 aa33.87■■■■□ 3.01
SPOP-220ENST00000515508 RAD54L2Q9Y4B4 1467 aa33.76■■■■□ 3
SPOP-220ENST00000515508 WDR97A6NE52 1622 aa33.73■■■□□ 2.99
SPOP-220ENST00000515508 SOGA1O94964 1423 aa33.72■■■□□ 2.99
SPOP-220ENST00000515508 FGD5Q6ZNL6 1462 aa33.7■■■□□ 2.99
SPOP-220ENST00000515508 CUX1P39880 1505 aa33.68■■■□□ 2.98
SPOP-220ENST00000515508 TDRD9Q8NDG6 1382 aaKnown RBP33.64■■■□□ 2.98
SPOP-220ENST00000515508 SNAPC4Q5SXM2 1469 aa33.58■■■□□ 2.97
SPOP-220ENST00000515508 FBLN2P98095 1184 aa33.58■■■□□ 2.97
SPOP-220ENST00000515508 ARAP1Q96P48 1450 aa33.55■■■□□ 2.96
SPOP-220ENST00000515508 MAGI1Q96QZ7 1491 aaPredicted RBP33.52■■■□□ 2.96
SPOP-220ENST00000515508 CYB5RLQ6IPT4 315 aa33.5■■■□□ 2.95
SPOP-220ENST00000515508 CLASP1Q7Z460 1538 aa33.49■■■□□ 2.95
SPOP-220ENST00000515508 GRIN2BQ13224 1484 aa33.48■■■□□ 2.95
SPOP-220ENST00000515508 SYNJ1O43426 1573 aa33.43■■■□□ 2.94
SPOP-220ENST00000515508 PBRM1Q86U86 1689 aa33.42■■■□□ 2.94
SPOP-220ENST00000515508 SYNJ2O15056 1496 aa33.39■■■□□ 2.94
SPOP-220ENST00000515508 CHMP7Q8WUX9 453 aaPredicted RBP33.36■■■□□ 2.93
SPOP-220ENST00000515508 ABCA10Q8WWZ4 1543 aa33.35■■■□□ 2.93
SPOP-220ENST00000515508 GAPVD1Q14C86 1478 aa33.35■■■□□ 2.93
SPOP-220ENST00000515508 ABCA5Q8WWZ7 1642 aa33.35■■■□□ 2.93
SPOP-220ENST00000515508 SUPT5HO00267 1087 aaKnown RBP33.27■■■□□ 2.92
SPOP-220ENST00000515508 BIVM-ERCC5R4GMW8 1640 aa33.18■■■□□ 2.9
SPOP-220ENST00000515508 TOP2BQ02880 1626 aa33.15■■■□□ 2.9
SPOP-220ENST00000515508 WRNQ14191 1432 aaPredicted RBP eCLIP33.14■■■□□ 2.9
SPOP-220ENST00000515508 TRHP20396 242 aaPredicted RBP33.12■■■□□ 2.89
SPOP-220ENST00000515508 ADAMTS12P58397 1594 aa33.09■■■□□ 2.89
SPOP-220ENST00000515508 GRIN2AQ12879 1464 aa33.07■■■□□ 2.88
SPOP-220ENST00000515508 NUP160Q12769 1436 aa32.98■■■□□ 2.87
SPOP-220ENST00000515508 CEP170Q5SW79 1584 aa32.97■■■□□ 2.87
SPOP-220ENST00000515508 ERICH3Q5RHP9 1530 aa32.94■■■□□ 2.86
SPOP-220ENST00000515508 FHAD1B1AJZ9 1412 aa32.92■■■□□ 2.86
SPOP-220ENST00000515508 ERCC6L2Q5T890 1561 aa32.92■■■□□ 2.86
SPOP-220ENST00000515508 SHROOM2Q13796 1616 aa32.89■■■□□ 2.86
SPOP-220ENST00000515508 RUSC2Q8N2Y8 1516 aa32.64■■■□□ 2.82
SPOP-220ENST00000515508 PRG4Q92954 1404 aaPredicted RBP32.6■■■□□ 2.81
SPOP-220ENST00000515508 JPH4Q96JJ6 628 aa32.52■■■□□ 2.8
SPOP-220ENST00000515508 KIF13AQ9H1H9 1805 aa32.47■■■□□ 2.79
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms