RNA–Protein interactions for RNA: ENST00000515507.5

TMEM173-215, Transcript of transmembrane protein 173, humanhuman

TSL 4

Gene TMEM173, Length 707 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM173-215ENST00000515507 NISCHQ9Y2I1 1504 aa33.12■■■□□ 2.89
TMEM173-215ENST00000515507 CCDC180Q9P1Z9 1646 aa29.66■■■□□ 2.34
TMEM173-215ENST00000515507 ABCC9O60706 1549 aa29.08■■■□□ 2.25
TMEM173-215ENST00000515507 RB1CC1Q8TDY2 1594 aa27.94■■■□□ 2.06
TMEM173-215ENST00000515507 NACADO15069 1562 aa27.82■■■□□ 2.04
TMEM173-215ENST00000515507 DCAF8L2P0C7V8 631 aa27.79■■■□□ 2.04
TMEM173-215ENST00000515507 ZCCHC6Q5VYS8 1495 aaKnown RBP27.55■■■□□ 2
TMEM173-215ENST00000515507 MYO15BQ96JP2 1530 aa27.51■■■□□ 2
TMEM173-215ENST00000515507 UNC13AQ9UPW8 1703 aa27.5■■□□□ 1.99
TMEM173-215ENST00000515507 DCAF1Q9Y4B6 1507 aa27.36■■□□□ 1.97
TMEM173-215ENST00000515507 PABPN1Q86U42 306 aaKnown RBP eCLIP27.08■■□□□ 1.93
TMEM173-215ENST00000515507 BICRAQ9NZM4 1560 aa27.05■■□□□ 1.92
TMEM173-215ENST00000515507 SCRIBQ14160 1630 aa27.05■■□□□ 1.92
TMEM173-215ENST00000515507 DNAJC5BQ9UF47 199 aa26.7■■□□□ 1.86
TMEM173-215ENST00000515507 SHROOM4Q9ULL8 1493 aa26.69■■□□□ 1.86
TMEM173-215ENST00000515507 EIF4G1Q04637 1599 aaKnown RBP26.37■■□□□ 1.81
TMEM173-215ENST00000515507 CC2D2AQ9P2K1 1620 aa26.35■■□□□ 1.81
TMEM173-215ENST00000515507 CECR2Q9BXF3 1484 aa26.11■■□□□ 1.77
TMEM173-215ENST00000515507 SMARCA4P51532 1647 aa25.81■■□□□ 1.72
TMEM173-215ENST00000515507 BAZ1AQ9NRL2 1556 aaPredicted RBP25.72■■□□□ 1.71
TMEM173-215ENST00000515507 SMARCA2P51531 1590 aa25.64■■□□□ 1.69
TMEM173-215ENST00000515507 ATAD2BQ9ULI0 1458 aa25.6■■□□□ 1.69
TMEM173-215ENST00000515507 NCAPD3P42695 1498 aa25.58■■□□□ 1.69
TMEM173-215ENST00000515507 MROH2BQ7Z745 1585 aa25.53■■□□□ 1.68
TMEM173-215ENST00000515507 HMGXB3Q12766 1538 aa25.53■■□□□ 1.68
TMEM173-215ENST00000515507 PEG3Q9GZU2 1588 aa25.48■■□□□ 1.67
TMEM173-215ENST00000515507 BAZ1BQ9UIG0 1483 aaKnown RBP25.46■■□□□ 1.67
TMEM173-215ENST00000515507 WIZO95785 1651 aa25.36■■□□□ 1.65
TMEM173-215ENST00000515507 RSF1Q96T23 1441 aaPredicted RBP25.12■■□□□ 1.61
TMEM173-215ENST00000515507 NESP48681 1621 aa25.11■■□□□ 1.61
TMEM173-215ENST00000515507 ERCC6Q03468 1493 aa25.1■■□□□ 1.61
TMEM173-215ENST00000515507 LAMC3Q9Y6N6 1575 aa25.05■■□□□ 1.6
TMEM173-215ENST00000515507 TOP2AP11388 1531 aaKnown RBP25.01■■□□□ 1.59
TMEM173-215ENST00000515507 KIF21AQ7Z4S6 1674 aa24.98■■□□□ 1.59
TMEM173-215ENST00000515507 CUX2O14529 1486 aa24.83■■□□□ 1.57
TMEM173-215ENST00000515507 CADPSQ9ULU8 1353 aa24.83■■□□□ 1.57
TMEM173-215ENST00000515507 THOC2Q8NI27 1593 aaKnown RBP24.82■■□□□ 1.56
TMEM173-215ENST00000515507 PDS5BQ9NTI5 1447 aa24.81■■□□□ 1.56
TMEM173-215ENST00000515507 PRDM2Q13029 1718 aa24.81■■□□□ 1.56
TMEM173-215ENST00000515507 CFTRP13569 1480 aa24.67■■□□□ 1.54
TMEM173-215ENST00000515507 CCDC88BA6NC98 1476 aa24.66■■□□□ 1.54
TMEM173-215ENST00000515507 CEP164Q9UPV0 1460 aa24.63■■□□□ 1.53
TMEM173-215ENST00000515507 FANCD2Q9BXW9 1451 aa24.62■■□□□ 1.53
TMEM173-215ENST00000515507 MRC2Q9UBG0 1479 aa24.61■■□□□ 1.53
TMEM173-215ENST00000515507 WDR62O43379 1518 aa24.54■■□□□ 1.52
TMEM173-215ENST00000515507 DNAJC5Q9H3Z4 198 aa24.46■■□□□ 1.51
TMEM173-215ENST00000515507 SUPT5HO00267 1087 aaKnown RBP24.45■■□□□ 1.5
TMEM173-215ENST00000515507 URB2Q14146 1524 aaKnown RBP24.37■■□□□ 1.49
TMEM173-215ENST00000515507 DNMBPQ6XZF7 1577 aa24.21■■□□□ 1.47
TMEM173-215ENST00000515507 TOPBP1Q92547 1522 aa24.21■■□□□ 1.47
TMEM173-215ENST00000515507 ABCC8Q09428 1581 aa24.2■■□□□ 1.46
TMEM173-215ENST00000515507 IFT140Q96RY7 1462 aa24.08■■□□□ 1.45
TMEM173-215ENST00000515507 TARBP1Q13395 1621 aaKnown RBP23.99■■□□□ 1.43
TMEM173-215ENST00000515507 ZNF608Q9ULD9 1512 aaPredicted RBP23.99■■□□□ 1.43
TMEM173-215ENST00000515507 EIF4G3O43432 1585 aaKnown RBP23.99■■□□□ 1.43
TMEM173-215ENST00000515507 POLA1P09884 1462 aaPredicted RBP23.98■■□□□ 1.43
TMEM173-215ENST00000515507 CUX1P39880 1505 aa23.97■■□□□ 1.43
TMEM173-215ENST00000515507 FGD5Q6ZNL6 1462 aa23.93■■□□□ 1.42
TMEM173-215ENST00000515507 RAD54L2Q9Y4B4 1467 aa23.88■■□□□ 1.41
TMEM173-215ENST00000515507 SOGA1O94964 1423 aa23.86■■□□□ 1.41
TMEM173-215ENST00000515507 WDR97A6NE52 1622 aa23.85■■□□□ 1.41
TMEM173-215ENST00000515507 CHD1O14646 1710 aa23.84■■□□□ 1.41
TMEM173-215ENST00000515507 AQRO60306 1485 aaKnown RBP eCLIP23.82■■□□□ 1.41e-8■■■■■ 34.4
TMEM173-215ENST00000515507 BIVM-ERCC5R4GMW8 1640 aa23.81■■□□□ 1.4
TMEM173-215ENST00000515507 PBRM1Q86U86 1689 aa23.77■■□□□ 1.4
TMEM173-215ENST00000515507 TOP2BQ02880 1626 aa23.77■■□□□ 1.4
TMEM173-215ENST00000515507 SYNJ1O43426 1573 aa23.76■■□□□ 1.39
TMEM173-215ENST00000515507 OSCARQ8IYS5 282 aa23.75■■□□□ 1.39
TMEM173-215ENST00000515507 TDRD9Q8NDG6 1382 aaKnown RBP23.74■■□□□ 1.39
TMEM173-215ENST00000515507 WRNQ14191 1432 aaPredicted RBP eCLIP23.74■■□□□ 1.39
TMEM173-215ENST00000515507 ABCA10Q8WWZ4 1543 aa23.65■■□□□ 1.38
TMEM173-215ENST00000515507 ABCA5Q8WWZ7 1642 aa23.65■■□□□ 1.38
TMEM173-215ENST00000515507 SNAPC4Q5SXM2 1469 aa23.63■■□□□ 1.37
TMEM173-215ENST00000515507 FBLN2P98095 1184 aa23.62■■□□□ 1.37
TMEM173-215ENST00000515507 GRIN2BQ13224 1484 aa23.62■■□□□ 1.37
TMEM173-215ENST00000515507 GAPVD1Q14C86 1478 aa23.62■■□□□ 1.37
TMEM173-215ENST00000515507 MAGI1Q96QZ7 1491 aaPredicted RBP23.58■■□□□ 1.37
TMEM173-215ENST00000515507 RIMBP3CA6NJZ7 1639 aa23.52■■□□□ 1.36
TMEM173-215ENST00000515507 RIMBP3BA6NNM3 1639 aa23.52■■□□□ 1.36
TMEM173-215ENST00000515507 RIMBP3Q9UFD9 1639 aa23.52■■□□□ 1.36
TMEM173-215ENST00000515507 CHMP7Q8WUX9 453 aaPredicted RBP23.49■■□□□ 1.35
TMEM173-215ENST00000515507 SYNJ2O15056 1496 aa23.49■■□□□ 1.35
TMEM173-215ENST00000515507 TRIM41Q8WV44 630 aa23.44■■□□□ 1.34
TMEM173-215ENST00000515507 ADAMTS12P58397 1594 aa23.44■■□□□ 1.34
TMEM173-215ENST00000515507 ARHGEF11O15085 1522 aa23.42■■□□□ 1.34
TMEM173-215ENST00000515507 ERICH3Q5RHP9 1530 aa23.39■■□□□ 1.34
TMEM173-215ENST00000515507 CLASP1Q7Z460 1538 aa23.38■■□□□ 1.33
TMEM173-215ENST00000515507 GRIN2AQ12879 1464 aa23.33■■□□□ 1.33
TMEM173-215ENST00000515507 FHAD1B1AJZ9 1412 aa23.31■■□□□ 1.32
TMEM173-215ENST00000515507 CEP170Q5SW79 1584 aa23.27■■□□□ 1.32
TMEM173-215ENST00000515507 CUL7Q14999 1698 aa23.25■■□□□ 1.31
TMEM173-215ENST00000515507 KIF27Q86VH2 1401 aa23.25■■□□□ 1.31
TMEM173-215ENST00000515507 ARAP1Q96P48 1450 aa23.2■■□□□ 1.3
TMEM173-215ENST00000515507 NUP160Q12769 1436 aa23.18■■□□□ 1.3
TMEM173-215ENST00000515507 CYB5RLQ6IPT4 315 aa23.18■■□□□ 1.3
TMEM173-215ENST00000515507 SHROOM2Q13796 1616 aa23.12■■□□□ 1.29
TMEM173-215ENST00000515507 IGF1RP08069 1367 aa23.11■■□□□ 1.29
TMEM173-215ENST00000515507 RUSC2Q8N2Y8 1516 aa23.1■■□□□ 1.29
TMEM173-215ENST00000515507 ERCC6L2Q5T890 1561 aa23.07■■□□□ 1.28
TMEM173-215ENST00000515507 CARMIL1Q5VZK9 1371 aa23.02■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms